RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 ZNF233A6NK53 670 aa23.07■■□□□ 1.28
UBE2D3-229ENST00000510129 ADAM12O43184 909 aa23.07■■□□□ 1.28
UBE2D3-229ENST00000510129 ABLIM3O94929 683 aa23.07■■□□□ 1.28
UBE2D3-229ENST00000510129 ATF2P15336 505 aa23.07■■□□□ 1.28
UBE2D3-229ENST00000510129 ROR1Q01973 937 aa23.07■■□□□ 1.28
UBE2D3-229ENST00000510129 SLC7A14Q8TBB6 771 aa23.07■■□□□ 1.28
UBE2D3-229ENST00000510129 EDAQ92838 391 aa23.07■■□□□ 1.28
UBE2D3-229ENST00000510129 HPS3Q969F9 1004 aa23.07■■□□□ 1.28
UBE2D3-229ENST00000510129 ZNF707Q96C28 371 aaPredicted RBP23.07■■□□□ 1.28
UBE2D3-229ENST00000510129 IKZF4Q9H2S9 585 aa23.07■■□□□ 1.28
UBE2D3-229ENST00000510129 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.07■■□□□ 1.285e-9■■□□□ 11.8
UBE2D3-229ENST00000510129 CDH22Q9UJ99 828 aa23.07■■□□□ 1.28
UBE2D3-229ENST00000510129 ZFP37Q9Y6Q3 630 aaPredicted RBP23.07■■□□□ 1.28
UBE2D3-229ENST00000510129 ANK1P16157 1881 aa23.07■■□□□ 1.28
UBE2D3-229ENST00000510129 OR6C75A6NL08 312 aa23.06■■□□□ 1.28
UBE2D3-229ENST00000510129 PRR33A8MZF0 331 aa23.06■■□□□ 1.28
UBE2D3-229ENST00000510129 C2CD4DB7Z1M9 353 aa23.06■■□□□ 1.28
UBE2D3-229ENST00000510129 KIF20AO95235 890 aa23.06■■□□□ 1.28
UBE2D3-229ENST00000510129 TAF6P49848 677 aa23.06■■□□□ 1.28
UBE2D3-229ENST00000510129 PTPN21Q16825 1174 aa23.06■■□□□ 1.28
UBE2D3-229ENST00000510129 SV2CQ496J9 727 aa23.06■■□□□ 1.28
UBE2D3-229ENST00000510129 FSIP1Q8NA03 581 aa23.06■■□□□ 1.28
UBE2D3-229ENST00000510129 SCFD1Q8WVM8 642 aa23.06■■□□□ 1.28
UBE2D3-229ENST00000510129 PCIF1Q9H4Z3 704 aa23.06■■□□□ 1.28
UBE2D3-229ENST00000510129 HSPBP1Q9NZL4 362 aa23.06■■□□□ 1.28
UBE2D3-229ENST00000510129 R3HCC1Q9Y3T6 440 aaKnown RBP23.06■■□□□ 1.28
UBE2D3-229ENST00000510129 PRRG1O14668 218 aa23.05■■□□□ 1.28
UBE2D3-229ENST00000510129 NDUFA8P51970 172 aa23.05■■□□□ 1.28
UBE2D3-229ENST00000510129 TFAMQ00059 246 aaKnown RBP23.05■■□□□ 1.28
UBE2D3-229ENST00000510129 MTMR3Q13615 1198 aa23.05■■□□□ 1.28
UBE2D3-229ENST00000510129 KNOP1Q1ED39 458 aaKnown RBP23.05■■□□□ 1.28
UBE2D3-229ENST00000510129 OVOS1Q6IE37 1185 aa23.05■■□□□ 1.28
UBE2D3-229ENST00000510129 RSPO2Q6UXX9 243 aaPredicted RBP23.05■■□□□ 1.28
UBE2D3-229ENST00000510129 METTL23Q86XA0 190 aa23.05■■□□□ 1.28
UBE2D3-229ENST00000510129 TCEAL8Q8IYN2 117 aa23.05■■□□□ 1.28
UBE2D3-229ENST00000510129 UBALD2Q8IYN6 164 aa23.05■■□□□ 1.28
UBE2D3-229ENST00000510129 GLIS3Q8NEA6 775 aa23.05■■□□□ 1.28
UBE2D3-229ENST00000510129 SLC39A2Q9NP94 309 aa23.05■■□□□ 1.28
UBE2D3-229ENST00000510129 AGPAT3Q9NRZ7 376 aa23.05■■□□□ 1.28
UBE2D3-229ENST00000510129 ITGA11Q9UKX5 1188 aa23.05■■□□□ 1.28
UBE2D3-229ENST00000510129 SORCS3Q9UPU3 1222 aa23.05■■□□□ 1.28
UBE2D3-229ENST00000510129 C2orf16Q68DN1 1984 aa23.05■■□□□ 1.28
UBE2D3-229ENST00000510129 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.04■■□□□ 1.28
UBE2D3-229ENST00000510129 PRPF40AO75400 957 aaKnown RBP23.04■■□□□ 1.28
UBE2D3-229ENST00000510129 SP100P23497 879 aaPredicted RBP23.04■■□□□ 1.28
UBE2D3-229ENST00000510129 GUCY2FP51841 1108 aa23.04■■□□□ 1.28
UBE2D3-229ENST00000510129 ZXDAP98168 799 aa23.04■■□□□ 1.28
UBE2D3-229ENST00000510129 MYBPC2Q14324 1141 aa23.04■■□□□ 1.28
UBE2D3-229ENST00000510129 C12orf56Q8IXR9 622 aa23.04■■□□□ 1.28
UBE2D3-229ENST00000510129 EFCAB13Q8IY85 973 aa23.04■■□□□ 1.28
UBE2D3-229ENST00000510129 NOC3LQ8WTT2 800 aaKnown RBP23.04■■□□□ 1.28
UBE2D3-229ENST00000510129 SENP8Q96LD8 212 aa23.04■■□□□ 1.28
UBE2D3-229ENST00000510129 AFF4Q9UHB7 1163 aaKnown RBP23.04■■□□□ 1.28
UBE2D3-229ENST00000510129 TCHHQ07283 1943 aa23.04■■□□□ 1.28
UBE2D3-229ENST00000510129 WDR27A2RRH5 827 aa23.03■■□□□ 1.28
UBE2D3-229ENST00000510129 GOLGA8IPA6NC78 632 aa23.03■■□□□ 1.28
UBE2D3-229ENST00000510129 GOLGA8JA6NMD2 632 aa23.03■■□□□ 1.28
UBE2D3-229ENST00000510129 TGFB1I1O43294 461 aa23.03■■□□□ 1.28
UBE2D3-229ENST00000510129 KLRC4O43908 158 aa23.03■■□□□ 1.28
UBE2D3-229ENST00000510129 LRG1P02750 347 aa23.03■■□□□ 1.28
UBE2D3-229ENST00000510129 CYP11A1P05108 521 aa23.03■■□□□ 1.28
UBE2D3-229ENST00000510129 TMEM191BP0C7N4 346 aa23.03■■□□□ 1.28
UBE2D3-229ENST00000510129 CPB1P15086 417 aa23.03■■□□□ 1.28
UBE2D3-229ENST00000510129 CASP1P29466 404 aa23.03■■□□□ 1.28
UBE2D3-229ENST00000510129 HOXD13P35453 343 aa23.03■■□□□ 1.28
UBE2D3-229ENST00000510129 ARPP19P56211 112 aa23.03■■□□□ 1.28
UBE2D3-229ENST00000510129 KRBA2Q6ZNG9 492 aa23.03■■□□□ 1.28
UBE2D3-229ENST00000510129 GRAMD1CQ8IYS0 662 aa23.03■■□□□ 1.28
UBE2D3-229ENST00000510129 LRRC52Q8N7C0 313 aa23.03■■□□□ 1.28
UBE2D3-229ENST00000510129 XXYLT1Q8NBI6 393 aa23.03■■□□□ 1.28
UBE2D3-229ENST00000510129 NXPE3Q969Y0 559 aa23.03■■□□□ 1.28
UBE2D3-229ENST00000510129 ANKRD36BP1Q96IX9 119 aa23.03■■□□□ 1.28
UBE2D3-229ENST00000510129 IGSF9Q9P2J2 1179 aa23.03■■□□□ 1.28
UBE2D3-229ENST00000510129 KPNA7A9QM74 516 aa23.02■■□□□ 1.28
UBE2D3-229ENST00000510129 TNNC2P02585 160 aa23.02■■□□□ 1.28
UBE2D3-229ENST00000510129 RPN1P04843 607 aaKnown RBP23.02■■□□□ 1.28
UBE2D3-229ENST00000510129 FSHRP23945 695 aa23.02■■□□□ 1.28
UBE2D3-229ENST00000510129 GBP2P32456 591 aaPredicted RBP23.02■■□□□ 1.28
UBE2D3-229ENST00000510129 RBP5P82980 135 aa23.02■■□□□ 1.28
UBE2D3-229ENST00000510129 SNRNP35Q16560 246 aaKnown RBP23.02■■□□□ 1.28
UBE2D3-229ENST00000510129 KMT5BQ4FZB7 885 aa23.02■■□□□ 1.28
UBE2D3-229ENST00000510129 WDR49Q8IV35 697 aa23.02■■□□□ 1.28
UBE2D3-229ENST00000510129 NELFCDQ8IXH7 590 aa23.02■■□□□ 1.28
UBE2D3-229ENST00000510129 THEM5Q8N1Q8 247 aa23.02■■□□□ 1.28
UBE2D3-229ENST00000510129 TMEM174Q8WUU8 243 aa23.02■■□□□ 1.28
UBE2D3-229ENST00000510129 CHAMP1Q96JM3 812 aa23.02■■□□□ 1.28
UBE2D3-229ENST00000510129 LRFN3Q9BTN0 628 aa23.02■■□□□ 1.28
UBE2D3-229ENST00000510129 CYP4F11Q9HBI6 524 aa23.02■■□□□ 1.28
UBE2D3-229ENST00000510129 EPS15L1Q9UBC2 864 aa23.02■■□□□ 1.28
UBE2D3-229ENST00000510129 CIZ1Q9ULV3 898 aaPredicted RBP23.02■■□□□ 1.28
UBE2D3-229ENST00000510129 TULP1O00294 542 aaPredicted RBP23.01■■□□□ 1.27
UBE2D3-229ENST00000510129 CYB561D2O14569 222 aa23.01■■□□□ 1.27
UBE2D3-229ENST00000510129 ZNF202O95125 648 aa23.01■■□□□ 1.27
UBE2D3-229ENST00000510129 SIGLEC14Q08ET2 396 aa23.01■■□□□ 1.27
UBE2D3-229ENST00000510129 SMARCB1Q12824 385 aa23.01■■□□□ 1.27
UBE2D3-229ENST00000510129 GPR17Q13304 367 aa23.01■■□□□ 1.27
UBE2D3-229ENST00000510129 PLD1Q13393 1074 aa23.01■■□□□ 1.27
UBE2D3-229ENST00000510129 DUOXA2Q1HG44 320 aa23.01■■□□□ 1.27
UBE2D3-229ENST00000510129 ELMOD1Q8N336 334 aa23.01■■□□□ 1.27
UBE2D3-229ENST00000510129 PDE11AQ9HCR9 933 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms