RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 GPC3P51654 580 aa8.28□□□□□ -1.08
CDC42-205ENST00000498236 AP3M2P53677 418 aa8.28□□□□□ -1.08
CDC42-205ENST00000498236 PRMT2P55345 433 aa8.28□□□□□ -1.08
CDC42-205ENST00000498236 JAM2P57087 298 aa8.28□□□□□ -1.08
CDC42-205ENST00000498236 POLR2FP61218 127 aaKnown RBP8.28□□□□□ -1.08
CDC42-205ENST00000498236 IGBP1P78318 339 aa8.28□□□□□ -1.08
CDC42-205ENST00000498236 DLG4P78352 724 aa8.28□□□□□ -1.08
CDC42-205ENST00000498236 CAP1Q01518 475 aa8.28□□□□□ -1.08
CDC42-205ENST00000498236 CACNB2Q08289 660 aaPredicted RBP8.28□□□□□ -1.08
CDC42-205ENST00000498236 PRPF4BQ13523 1007 aaKnown RBP8.28□□□□□ -1.08
CDC42-205ENST00000498236 SUZ12Q15022 739 aaKnown RBP8.28□□□□□ -1.08
CDC42-205ENST00000498236 ARHGEF6Q15052 776 aa8.28□□□□□ -1.08
CDC42-205ENST00000498236 KYAT1Q16773 422 aa8.28□□□□□ -1.08
CDC42-205ENST00000498236 KRT39Q6A163 491 aa8.28□□□□□ -1.08
CDC42-205ENST00000498236 NFRKBQ6P4R8 1299 aa8.28□□□□□ -1.08
CDC42-205ENST00000498236 MPZL3Q6UWV2 235 aa8.28□□□□□ -1.08
CDC42-205ENST00000498236 CRELD2Q6UXH1 353 aaPredicted RBP8.28□□□□□ -1.08
CDC42-205ENST00000498236 RAD9BQ6WBX8 426 aa8.28□□□□□ -1.08
CDC42-205ENST00000498236 C15orf39Q6ZRI6 1047 aa8.28□□□□□ -1.08
CDC42-205ENST00000498236 ZNF662Q6ZS27 426 aa8.28□□□□□ -1.08
CDC42-205ENST00000498236 TOGARAM2Q6ZUX3 1019 aa8.28□□□□□ -1.08
CDC42-205ENST00000498236 RRAGAQ7L523 313 aa8.28□□□□□ -1.08
CDC42-205ENST00000498236 SRGAP1Q7Z6B7 1085 aa8.28□□□□□ -1.08
CDC42-205ENST00000498236 REXO1L1PQ8IX06 675 aa8.28□□□□□ -1.08
CDC42-205ENST00000498236 ZSWIM2Q8NEG5 633 aa8.28□□□□□ -1.08
CDC42-205ENST00000498236 ALKBH8Q96BT7 664 aaKnown RBP8.28□□□□□ -1.08
CDC42-205ENST00000498236 LENG1Q96BZ8 264 aaPredicted RBP8.28□□□□□ -1.08
CDC42-205ENST00000498236 SAAL1Q96ER3 474 aa8.28□□□□□ -1.08
CDC42-205ENST00000498236 ERO1AQ96HE7 468 aa8.28□□□□□ -1.08
CDC42-205ENST00000498236 PPP1R13BQ96KQ4 1090 aa8.28□□□□□ -1.08
CDC42-205ENST00000498236 NLRP4Q96MN2 994 aa8.28□□□□□ -1.08
CDC42-205ENST00000498236 GAS2L1Q99501 681 aaPredicted RBP8.28□□□□□ -1.08
CDC42-205ENST00000498236 CHP1Q99653 195 aa8.28□□□□□ -1.08
CDC42-205ENST00000498236 FAM213AQ9BRX8 229 aa8.28□□□□□ -1.08
CDC42-205ENST00000498236 MTG1Q9BT17 334 aaPredicted RBP8.28□□□□□ -1.08
CDC42-205ENST00000498236 MSTO1Q9BUK6 570 aa8.28□□□□□ -1.08
CDC42-205ENST00000498236 HAPLN2Q9GZV7 340 aa8.28□□□□□ -1.08
CDC42-205ENST00000498236 TMEM117Q9H0C3 514 aa8.28□□□□□ -1.08
CDC42-205ENST00000498236 INTS2Q9H0H0 1204 aaKnown RBP8.28□□□□□ -1.08
CDC42-205ENST00000498236 SPC25Q9HBM1 224 aa8.28□□□□□ -1.08
CDC42-205ENST00000498236 SETD4Q9NVD3 440 aa8.28□□□□□ -1.08
CDC42-205ENST00000498236 APEX2Q9UBZ4 518 aa8.28□□□□□ -1.08
CDC42-205ENST00000498236 AKT3Q9Y243 479 aa8.28□□□□□ -1.08
CDC42-205ENST00000498236 BZW2Q9Y6E2 419 aaKnown RBP8.28□□□□□ -1.08
CDC42-205ENST00000498236 EPN1Q9Y6I3 576 aaPredicted RBP8.28□□□□□ -1.08
CDC42-205ENST00000498236 A0A087WZ62 844 aa8.27□□□□□ -1.09
CDC42-205ENST00000498236 USP27XA6NNY8 438 aa8.27□□□□□ -1.09
CDC42-205ENST00000498236 EIF3CLB5ME19 914 aaKnown RBP8.27□□□□□ -1.09
CDC42-205ENST00000498236 INO80B-WBP1J3KQ70 363 aa8.27□□□□□ -1.09
CDC42-205ENST00000498236 OGTO15294 1046 aa8.27□□□□□ -1.09
CDC42-205ENST00000498236 ZC3H11AO75152 810 aaKnown RBP eCLIP8.27□□□□□ -1.09
CDC42-205ENST00000498236 ADAMTS4O75173 837 aa8.27□□□□□ -1.09
CDC42-205ENST00000498236 GPR32O75388 356 aa8.27□□□□□ -1.09
CDC42-205ENST00000498236 LCA5LO95447 670 aa8.27□□□□□ -1.09
CDC42-205ENST00000498236 SERPING1P05155 500 aa8.27□□□□□ -1.09
CDC42-205ENST00000498236 RPLP2P05387 115 aaKnown RBP8.27□□□□□ -1.09
CDC42-205ENST00000498236 GJB1P08034 283 aa8.27□□□□□ -1.09
CDC42-205ENST00000498236 MYL3P08590 195 aa8.27□□□□□ -1.09
CDC42-205ENST00000498236 IQCF3P0C7M6 154 aa8.27□□□□□ -1.09
CDC42-205ENST00000498236 MCF2P10911 925 aa8.27□□□□□ -1.09
CDC42-205ENST00000498236 CYLC1P35663 651 aaPredicted RBP8.27□□□□□ -1.09
CDC42-205ENST00000498236 PRKCIP41743 596 aa8.27□□□□□ -1.09
CDC42-205ENST00000498236 GCLMP48507 274 aa8.27□□□□□ -1.09
CDC42-205ENST00000498236 NLRP11P59045 1033 aaKnown RBP8.27□□□□□ -1.09
CDC42-205ENST00000498236 MTF1Q14872 753 aa8.27□□□□□ -1.09
CDC42-205ENST00000498236 SURF1Q15526 300 aa8.27□□□□□ -1.09
CDC42-205ENST00000498236 ASTE1Q2TB18 679 aaPredicted RBP8.27□□□□□ -1.09
CDC42-205ENST00000498236 ATF7IP2Q5U623 682 aa8.27□□□□□ -1.09
CDC42-205ENST00000498236 SFMBT2Q5VUG0 894 aa8.27□□□□□ -1.09
CDC42-205ENST00000498236 HGSNATQ68CP4 663 aa8.27□□□□□ -1.09
CDC42-205ENST00000498236 CCSAPQ6IQ19 270 aaPredicted RBP8.27□□□□□ -1.09
CDC42-205ENST00000498236 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.27□□□□□ -1.09
CDC42-205ENST00000498236 SESTD1Q86VW0 696 aa8.27□□□□□ -1.09
CDC42-205ENST00000498236 NLRP8Q86W28 1048 aa8.27□□□□□ -1.09
CDC42-205ENST00000498236 BRSK2Q8IWQ3 736 aa8.27□□□□□ -1.09
CDC42-205ENST00000498236 NME8Q8N427 588 aa8.27□□□□□ -1.09
CDC42-205ENST00000498236 KLHDC9Q8NEP7 349 aa8.27□□□□□ -1.09
CDC42-205ENST00000498236 CD99L2Q8TCZ2 262 aa8.27□□□□□ -1.09
CDC42-205ENST00000498236 ZBTB10Q96DT7 871 aa8.27□□□□□ -1.09
CDC42-205ENST00000498236 FAM81BQ96LP2 452 aa8.27□□□□□ -1.09
CDC42-205ENST00000498236 EIF3CQ99613 913 aaKnown RBP8.27□□□□□ -1.09
CDC42-205ENST00000498236 FDXACB1Q9BRP7 624 aaPredicted RBP8.27□□□□□ -1.09
CDC42-205ENST00000498236 STK33Q9BYT3 514 aa8.27□□□□□ -1.09
CDC42-205ENST00000498236 INO80BQ9C086 356 aaPredicted RBP8.27□□□□□ -1.09
CDC42-205ENST00000498236 ADAMTS10Q9H324 1103 aa8.27□□□□□ -1.09
CDC42-205ENST00000498236 RUBCNLQ9H714 662 aa8.27□□□□□ -1.09
CDC42-205ENST00000498236 MINDY3Q9H8M7 445 aa8.27□□□□□ -1.09
CDC42-205ENST00000498236 NHEJ1Q9H9Q4 299 aaPredicted RBP8.27□□□□□ -1.09
CDC42-205ENST00000498236 RBAKQ9NYW8 714 aaPredicted RBP8.27□□□□□ -1.09
CDC42-205ENST00000498236 ANKFY1Q9P2R3 1169 aa8.27□□□□□ -1.09
CDC42-205ENST00000498236 A0A1B0GUA9 196 aa8.26□□□□□ -1.09
CDC42-205ENST00000498236 C17orf102A2RUQ5 167 aa8.26□□□□□ -1.09
CDC42-205ENST00000498236 RBAK-RBAKDNI3L0D1 243 aa8.26□□□□□ -1.09
CDC42-205ENST00000498236 FKTNO75072 461 aa8.26□□□□□ -1.09
CDC42-205ENST00000498236 GFPT2O94808 682 aa8.26□□□□□ -1.09
CDC42-205ENST00000498236 C4BPAP04003 597 aaKnown RBP8.26□□□□□ -1.09
CDC42-205ENST00000498236 VTNP04004 478 aa8.26□□□□□ -1.09
CDC42-205ENST00000498236 C6orf222P0C671 652 aaPredicted RBP8.26□□□□□ -1.09
CDC42-205ENST00000498236 CYP2C9P11712 490 aa8.26□□□□□ -1.09
CDC42-205ENST00000498236 ACTN1P12814 892 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms