RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, human

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS36-205	ENST00000492650	NEU2	Q9Y3R4	380 aa		4.39	□□□□□ -1.71
VPS36-205	ENST00000492650	PRKAB1	Q9Y478	270 aa		4.39	□□□□□ -1.71
VPS36-205	ENST00000492650	CCDC151	A5D8V7	595 aa		4.38	□□□□□ -1.71
VPS36-205	ENST00000492650	TRIM75P	A6NK02	468 aa		4.38	□□□□□ -1.71
VPS36-205	ENST00000492650	TOR1B	O14657	336 aa		4.38	□□□□□ -1.71
VPS36-205	ENST00000492650	MPPED1	O15442	326 aa		4.38	□□□□□ -1.71
VPS36-205	ENST00000492650	MARCH6	O60337	910 aa		4.38	□□□□□ -1.71
VPS36-205	ENST00000492650	PROP1	O75360	226 aa		4.38	□□□□□ -1.71
VPS36-205	ENST00000492650	SRGN	P10124	158 aa		4.38	□□□□□ -1.71
VPS36-205	ENST00000492650	WAS	P42768	502 aa		4.38	□□□□□ -1.71
VPS36-205	ENST00000492650	ATXN1	P54253	815 aa	Known RBP	4.38	□□□□□ -1.71
VPS36-205	ENST00000492650	ZNF280A	P59817	542 aa	Predicted RBP	4.38	□□□□□ -1.71
VPS36-205	ENST00000492650	CDC42EP1	Q00587	391 aa		4.38	□□□□□ -1.71
VPS36-205	ENST00000492650	TSTD2	Q5T7W7	516 aa		4.38	□□□□□ -1.71
VPS36-205	ENST00000492650	GADL1	Q6ZQY3	521 aa		4.38	□□□□□ -1.71
VPS36-205	ENST00000492650	PEG10	Q86TG7	708 aa	Known RBP	4.38	□□□□□ -1.71
VPS36-205	ENST00000492650	AOPEP	Q8N6M6	819 aa		4.38	□□□□□ -1.71
VPS36-205	ENST00000492650	NSUN7	Q8NE18	718 aa	Known RBP	4.38	□□□□□ -1.71
VPS36-205	ENST00000492650	LPIN2	Q92539	896 aa		4.38	□□□□□ -1.71
VPS36-205	ENST00000492650	JADE3	Q92613	823 aa		4.38	□□□□□ -1.71
VPS36-205	ENST00000492650	UROC1	Q96N76	676 aa		4.38	□□□□□ -1.71
VPS36-205	ENST00000492650	IMPG2	Q9BZV3	1241 aa		4.38	□□□□□ -1.71
VPS36-205	ENST00000492650	PUS7L	Q9H0K6	701 aa	Known RBP	4.38	□□□□□ -1.71
VPS36-205	ENST00000492650	JKAMP	Q9P055	326 aa		4.38	□□□□□ -1.71
VPS36-205	ENST00000492650	KLHL33	A6NCF5	533 aa		4.37	□□□□□ -1.71
VPS36-205	ENST00000492650	MT-CO1	P00395	513 aa		4.37	□□□□□ -1.71
VPS36-205	ENST00000492650	CD1A	P06126	327 aa		4.37	□□□□□ -1.71
VPS36-205	ENST00000492650	CHRM2	P08172	466 aa		4.37	□□□□□ -1.71
VPS36-205	ENST00000492650	GPD1	P21695	349 aa		4.37	□□□□□ -1.71
VPS36-205	ENST00000492650	IARS	P41252	1262 aa	Known RBP	4.37	□□□□□ -1.71
VPS36-205	ENST00000492650	ABCG1	P45844	678 aa		4.37	□□□□□ -1.71
VPS36-205	ENST00000492650	MAPK10	P53779	464 aa		4.37	□□□□□ -1.71
VPS36-205	ENST00000492650	DYRK1A	Q13627	763 aa		4.37	□□□□□ -1.71
VPS36-205	ENST00000492650	IL10RA	Q13651	578 aa		4.37	□□□□□ -1.71
VPS36-205	ENST00000492650	LRCH2	Q5VUJ6	765 aa		4.37	□□□□□ -1.71
VPS36-205	ENST00000492650	SLC17A8	Q8NDX2	589 aa		4.37	□□□□□ -1.71
VPS36-205	ENST00000492650	C1orf162	Q8NEQ5	155 aa	Predicted RBP	4.37	□□□□□ -1.71
VPS36-205	ENST00000492650	IL17RD	Q8NFM7	739 aa		4.37	□□□□□ -1.71
VPS36-205	ENST00000492650	IFI44	Q8TCB0	444 aa		4.37	□□□□□ -1.71
VPS36-205	ENST00000492650	SNX19	Q92543	992 aa		4.37	□□□□□ -1.71
VPS36-205	ENST00000492650	FAXDC2	Q96IV6	333 aa		4.37	□□□□□ -1.71
VPS36-205	ENST00000492650	PGBD1	Q96JS3	809 aa		4.37	□□□□□ -1.71
VPS36-205	ENST00000492650	CLPTM1L	Q96KA5	538 aa		4.37	□□□□□ -1.71
VPS36-205	ENST00000492650	KLHL32	Q96NJ5	620 aa		4.37	□□□□□ -1.71
VPS36-205	ENST00000492650	PSMD1	Q99460	953 aa		4.37	□□□□□ -1.71
VPS36-205	ENST00000492650	CTTNBP2NL	Q9P2B4	639 aa		4.37	□□□□□ -1.71
VPS36-205	ENST00000492650	ARPP21	Q9UBL0	812 aa	Predicted RBP	4.37	□□□□□ -1.71
VPS36-205	ENST00000492650	TUBD1	Q9UJT1	453 aa		4.37	□□□□□ -1.71
VPS36-205	ENST00000492650	CCDC195	A0A1B0GUA6	201 aa		4.36	□□□□□ -1.71
VPS36-205	ENST00000492650	INO80B-WBP1	J3KQ70	363 aa		4.36	□□□□□ -1.71
VPS36-205	ENST00000492650	PROM1	O43490	865 aa		4.36	□□□□□ -1.71
VPS36-205	ENST00000492650	XPOT	O43592	962 aa	Known RBP	4.36	□□□□□ -1.71
VPS36-205	ENST00000492650	SGTA	O43765	313 aa		4.36	□□□□□ -1.71
VPS36-205	ENST00000492650	SLC43A1	O75387	559 aa		4.36	□□□□□ -1.71
VPS36-205	ENST00000492650	POU3F3	P20264	500 aa	Predicted RBP	4.36	□□□□□ -1.71
VPS36-205	ENST00000492650	C5AR1	P21730	350 aa		4.36	□□□□□ -1.71
VPS36-205	ENST00000492650	GRIA3	P42263	894 aa		4.36	□□□□□ -1.71
VPS36-205	ENST00000492650	ANXA11	P50995	505 aa	Known RBP	4.36	□□□□□ -1.71
VPS36-205	ENST00000492650	EXOSC10	Q01780	885 aa	Known RBP	4.36	□□□□□ -1.71
VPS36-205	ENST00000492650	PIGF	Q07326	219 aa		4.36	□□□□□ -1.71
VPS36-205	ENST00000492650	SRSF4	Q08170	494 aa	Known RBP	4.36	□□□□□ -1.71
VPS36-205	ENST00000492650	NBPF8	Q3BBV2	869 aa		4.36	□□□□□ -1.71
VPS36-205	ENST00000492650	FLYWCH1	Q4VC44	716 aa		4.36	□□□□□ -1.71
VPS36-205	ENST00000492650	KIAA0895L	Q68EN5	471 aa		4.36	□□□□□ -1.71
VPS36-205	ENST00000492650	PPP4R3A	Q6IN85	833 aa		4.36	□□□□□ -1.71
VPS36-205	ENST00000492650	ZNF788	Q6ZQV5	615 aa		4.36	□□□□□ -1.71
VPS36-205	ENST00000492650	DDX42	Q86XP3	938 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
VPS36-205	ENST00000492650	SRRM1	Q8IYB3	904 aa	Known RBP	4.36	□□□□□ -1.71
VPS36-205	ENST00000492650	ADGRG5	Q8IZF4	528 aa		4.36	□□□□□ -1.71
VPS36-205	ENST00000492650	CFAP52	Q8N1V2	620 aa		4.36	□□□□□ -1.71
VPS36-205	ENST00000492650	UBE2Q2	Q8WVN8	375 aa		4.36	□□□□□ -1.71
VPS36-205	ENST00000492650	SLC29A3	Q9BZD2	475 aa		4.36	□□□□□ -1.71
VPS36-205	ENST00000492650	INO80B	Q9C086	356 aa	Predicted RBP	4.36	□□□□□ -1.71
VPS36-205	ENST00000492650	TMX1	Q9H3N1	280 aa		4.36	□□□□□ -1.71
VPS36-205	ENST00000492650	VSX1	Q9NZR4	365 aa	Predicted RBP	4.36	□□□□□ -1.71
VPS36-205	ENST00000492650	SLC45A2	Q9UMX9	530 aa		4.36	□□□□□ -1.71
VPS36-205	ENST00000492650	ST3GAL5	Q9UNP4	418 aa		4.36	□□□□□ -1.71
VPS36-205	ENST00000492650	ENTPD2	Q9Y5L3	495 aa		4.36	□□□□□ -1.71
VPS36-205	ENST00000492650	CCDC154	A6NI56	674 aa		4.35	□□□□□ -1.71
VPS36-205	ENST00000492650	HTRA2	O43464	458 aa	Predicted RBP	4.35	□□□□□ -1.71
VPS36-205	ENST00000492650	SUN1	O94901	812 aa		4.35	□□□□□ -1.71
VPS36-205	ENST00000492650	MYBL2	P10244	700 aa		4.35	□□□□□ -1.71
VPS36-205	ENST00000492650	PPP3CB	P16298	524 aa		4.35	□□□□□ -1.71
VPS36-205	ENST00000492650	MC2R	Q01718	297 aa		4.35	□□□□□ -1.71
VPS36-205	ENST00000492650	KIF23	Q02241	960 aa	Predicted RBP	4.35	□□□□□ -1.71
VPS36-205	ENST00000492650	FOXF2	Q12947	444 aa		4.35	□□□□□ -1.71
VPS36-205	ENST00000492650	RAB39A	Q14964	217 aa		4.35	□□□□□ -1.71
VPS36-205	ENST00000492650	PTPRR	Q15256	657 aa		4.35	□□□□□ -1.71
VPS36-205	ENST00000492650	C3orf36	Q3SXR2	165 aa		4.35	□□□□□ -1.71
VPS36-205	ENST00000492650	MICALCL	Q6ZW33	695 aa		4.35	□□□□□ -1.71
VPS36-205	ENST00000492650	ZNF365	Q70YC5	407 aa		4.35	□□□□□ -1.71
VPS36-205	ENST00000492650	PDPR	Q8NCN5	879 aa		4.35	□□□□□ -1.71
VPS36-205	ENST00000492650	B3GALNT2	Q8NCR0	500 aa		4.35	□□□□□ -1.71
VPS36-205	ENST00000492650	TMIE	Q8NEW7	156 aa		4.35	□□□□□ -1.71
VPS36-205	ENST00000492650	MYCBPAP	Q8TBZ2	947 aa		4.35	□□□□□ -1.71
VPS36-205	ENST00000492650	KAT5	Q92993	513 aa		4.35	□□□□□ -1.71
VPS36-205	ENST00000492650	NAF1	Q96HR8	494 aa	Known RBP	4.35	□□□□□ -1.71
VPS36-205	ENST00000492650	TIMP4	Q99727	224 aa		4.35	□□□□□ -1.71
VPS36-205	ENST00000492650	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	4.35	□□□□□ -1.71
VPS36-205	ENST00000492650	LIMCH1	Q9UPQ0	1083 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms