RNA–Protein interactions for RNA: ENST00000488994.5

PNCK-231, Transcript of pregnancy up-regulated nonubiquitous CaM kinase, human

TSL 2

Gene PNCK, Length 1,437 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNCK-231	ENST00000488994	GPR88	Q9GZN0	384 aa		19.82	■□□□□ 0.76
PNCK-231	ENST00000488994	NIF3L1	Q9GZT8	377 aa		19.82	■□□□□ 0.76
PNCK-231	ENST00000488994	TSPYL2	Q9H2G4	693 aa	Predicted RBP	19.82	■□□□□ 0.76
PNCK-231	ENST00000488994	ARHGAP20	Q9P2F6	1191 aa		19.82	■□□□□ 0.76
PNCK-231	ENST00000488994	CUL9	Q8IWT3	2517 aa		19.81	■□□□□ 0.76
PNCK-231	ENST00000488994	GOLGA6L9	A6NEM1	432 aa		19.81	■□□□□ 0.76
PNCK-231	ENST00000488994	MGEA5	O60502	916 aa		19.81	■□□□□ 0.76
PNCK-231	ENST00000488994	LRRN2	O75325	713 aa		19.81	■□□□□ 0.76
PNCK-231	ENST00000488994	NDUFA10	O95299	355 aa		19.81	■□□□□ 0.76
PNCK-231	ENST00000488994	CCDC175	P0C221	793 aa		19.81	■□□□□ 0.76
PNCK-231	ENST00000488994	ACR	P10323	421 aa		19.81	■□□□□ 0.76
PNCK-231	ENST00000488994	PNPLA4	P41247	253 aa		19.81	■□□□□ 0.76
PNCK-231	ENST00000488994	BPIFB4	P59827	614 aa		19.81	■□□□□ 0.76
PNCK-231	ENST00000488994	FAM189B	P81408	668 aa		19.81	■□□□□ 0.76
PNCK-231	ENST00000488994	ARID5A	Q03989	594 aa		19.81	■□□□□ 0.76
PNCK-231	ENST00000488994	TCTN1	Q2MV58	587 aa		19.81	■□□□□ 0.76
PNCK-231	ENST00000488994	ZNF667	Q5HYK9	610 aa		19.81	■□□□□ 0.76
PNCK-231	ENST00000488994	HGSNAT	Q68CP4	663 aa		19.81	■□□□□ 0.76
PNCK-231	ENST00000488994	RAD9B	Q6WBX8	426 aa		19.81	■□□□□ 0.76
PNCK-231	ENST00000488994	ECHDC2	Q86YB7	292 aa		19.81	■□□□□ 0.76
PNCK-231	ENST00000488994	RPUSD2	Q8IZ73	545 aa	Known RBP	19.81	■□□□□ 0.76
PNCK-231	ENST00000488994	TXLNB	Q8N3L3	684 aa		19.81	■□□□□ 0.76
PNCK-231	ENST00000488994	ZMAT2	Q96NC0	199 aa	Known RBP	19.81	■□□□□ 0.76
PNCK-231	ENST00000488994	XYLT2	Q9H1B5	865 aa		19.81	■□□□□ 0.76
PNCK-231	ENST00000488994	LUC7L	Q9NQ29	371 aa	Known RBP	19.81	■□□□□ 0.76
PNCK-231	ENST00000488994	KLK14	Q9P0G3	267 aa		19.81	■□□□□ 0.76
PNCK-231	ENST00000488994	SIX4	Q9UIU6	781 aa		19.81	■□□□□ 0.76
PNCK-231	ENST00000488994	AJAP1	Q9UKB5	411 aa	Predicted RBP	19.81	■□□□□ 0.76
PNCK-231	ENST00000488994	AGAP1	Q9UPQ3	857 aa		19.81	■□□□□ 0.76
PNCK-231	ENST00000488994	EIF3CL	B5ME19	914 aa	Known RBP	19.8	■□□□□ 0.76
PNCK-231	ENST00000488994	AKR1B10	O60218	316 aa		19.8	■□□□□ 0.76
PNCK-231	ENST00000488994	FGB	P02675	491 aa		19.8	■□□□□ 0.76
PNCK-231	ENST00000488994	DNAJB2	P25686	324 aa		19.8	■□□□□ 0.76
PNCK-231	ENST00000488994	POLR2B	P30876	1174 aa	Known RBP	19.8	■□□□□ 0.76
PNCK-231	ENST00000488994	SPA17	Q15506	151 aa		19.8	■□□□□ 0.76
PNCK-231	ENST00000488994	E4F1	Q66K89	784 aa	Predicted RBP	19.8	■□□□□ 0.76
PNCK-231	ENST00000488994	CXorf38	Q8TB03	319 aa		19.8	■□□□□ 0.76
PNCK-231	ENST00000488994	RSPH1	Q8WYR4	309 aa		19.8	■□□□□ 0.76
PNCK-231	ENST00000488994	HPDL	Q96IR7	371 aa		19.8	■□□□□ 0.76
PNCK-231	ENST00000488994	FAM84A	Q96KN4	292 aa		19.8	■□□□□ 0.76
PNCK-231	ENST00000488994	EIF3C	Q99613	913 aa	Known RBP	19.8	■□□□□ 0.76
PNCK-231	ENST00000488994	CDX2	Q99626	313 aa	Predicted RBP	19.8	■□□□□ 0.76
PNCK-231	ENST00000488994	RSAD1	Q9HA92	442 aa		19.8	■□□□□ 0.76
PNCK-231	ENST00000488994	CYP3A43	Q9HB55	503 aa		19.8	■□□□□ 0.76
PNCK-231	ENST00000488994	APOBEC3G	Q9HC16	384 aa	Known RBP	19.8	■□□□□ 0.76
PNCK-231	ENST00000488994	NUB1	Q9Y5A7	615 aa		19.8	■□□□□ 0.76
PNCK-231	ENST00000488994		C9IYK1	514 aa		19.79	■□□□□ 0.76
PNCK-231	ENST00000488994	ZNF500	O60304	480 aa	Predicted RBP	19.79	■□□□□ 0.76
PNCK-231	ENST00000488994	TH	P07101	528 aa		19.79	■□□□□ 0.76
PNCK-231	ENST00000488994	EIF4A3	P38919	411 aa	Known RBP	19.79	■□□□□ 0.76
PNCK-231	ENST00000488994	AGMO	Q6ZNB7	445 aa		19.79	■□□□□ 0.76
PNCK-231	ENST00000488994	PPP1R10	Q96QC0	940 aa	Known RBP	19.79	■□□□□ 0.76
PNCK-231	ENST00000488994	MTIF3	Q9H2K0	278 aa	Known RBP	19.79	■□□□□ 0.76
PNCK-231	ENST00000488994	HAUS4	Q9H6D7	363 aa		19.79	■□□□□ 0.76
PNCK-231	ENST00000488994	ELAC1	Q9H777	363 aa	Known RBP	19.79	■□□□□ 0.76
PNCK-231	ENST00000488994	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	19.79	■□□□□ 0.76	2e-6	■■■■■ 34.8
PNCK-231	ENST00000488994	CXXC1	Q9P0U4	656 aa	Predicted RBP	19.79	■□□□□ 0.76
PNCK-231	ENST00000488994	RALGAPA2	Q2PPJ7	1873 aa		19.79	■□□□□ 0.76
PNCK-231	ENST00000488994	MYO9B	Q13459	2157 aa		19.78	■□□□□ 0.76
PNCK-231	ENST00000488994	ARL5C	A6NH57	179 aa		19.78	■□□□□ 0.76
PNCK-231	ENST00000488994	PAX3	P23760	479 aa		19.78	■□□□□ 0.76
PNCK-231	ENST00000488994	USP8	P40818	1118 aa		19.78	■□□□□ 0.76
PNCK-231	ENST00000488994	WDR72	Q3MJ13	1102 aa		19.78	■□□□□ 0.76
PNCK-231	ENST00000488994	C10orf76	Q5T2E6	689 aa		19.78	■□□□□ 0.76
PNCK-231	ENST00000488994	C9orf57	Q5W0N0	161 aa		19.78	■□□□□ 0.76
PNCK-231	ENST00000488994	SPOPL	Q6IQ16	392 aa		19.78	■□□□□ 0.76
PNCK-231	ENST00000488994	DEFB128	Q7Z7B8	93 aa		19.78	■□□□□ 0.76
PNCK-231	ENST00000488994	ZNF598	Q86UK7	904 aa	Known RBP	19.78	■□□□□ 0.76
PNCK-231	ENST00000488994	CCAR2	Q8N163	923 aa	Known RBP	19.78	■□□□□ 0.76
PNCK-231	ENST00000488994	DBF4B	Q8NFT6	615 aa		19.78	■□□□□ 0.76
PNCK-231	ENST00000488994	ZNF560	Q96MR9	790 aa		19.78	■□□□□ 0.76
PNCK-231	ENST00000488994	GAD1	Q99259	594 aa		19.78	■□□□□ 0.76
PNCK-231	ENST00000488994	CNTN6	Q9UQ52	1028 aa		19.78	■□□□□ 0.76
PNCK-231	ENST00000488994	ADGRG1	Q9Y653	693 aa		19.78	■□□□□ 0.76
PNCK-231	ENST00000488994	CHD9	Q3L8U1	2897 aa		19.78	■□□□□ 0.76
PNCK-231	ENST00000488994	ANO9	A1A5B4	782 aa		19.77	■□□□□ 0.76
PNCK-231	ENST00000488994	CIT	O14578	2027 aa		19.77	■□□□□ 0.76
PNCK-231	ENST00000488994	INPPL1	O15357	1258 aa		19.77	■□□□□ 0.76
PNCK-231	ENST00000488994	LCA5L	O95447	670 aa		19.77	■□□□□ 0.76
PNCK-231	ENST00000488994	KRT5	P13647	590 aa		19.77	■□□□□ 0.76
PNCK-231	ENST00000488994	ANK1	P16157	1881 aa		19.77	■□□□□ 0.76
PNCK-231	ENST00000488994	LRPAP1	P30533	357 aa		19.77	■□□□□ 0.76
PNCK-231	ENST00000488994	RPL9	P32969	192 aa	Known RBP	19.77	■□□□□ 0.76
PNCK-231	ENST00000488994	MLH1	P40692	756 aa		19.77	■□□□□ 0.76
PNCK-231	ENST00000488994	KIF11	P52732	1056 aa		19.77	■□□□□ 0.76
PNCK-231	ENST00000488994	TNNC1	P63316	161 aa		19.77	■□□□□ 0.76
PNCK-231	ENST00000488994	PTK2	Q05397	1052 aa		19.77	■□□□□ 0.76
PNCK-231	ENST00000488994	BMS1	Q14692	1282 aa	Known RBP	19.77	■□□□□ 0.76
PNCK-231	ENST00000488994	MTF1	Q14872	753 aa		19.77	■□□□□ 0.76
PNCK-231	ENST00000488994	ASTE1	Q2TB18	679 aa	Predicted RBP	19.77	■□□□□ 0.76
PNCK-231	ENST00000488994	GLRA4	Q5JXX5	417 aa		19.77	■□□□□ 0.76
PNCK-231	ENST00000488994	GLB1L	Q6UWU2	654 aa		19.77	■□□□□ 0.76
PNCK-231	ENST00000488994	KAT5	Q92993	513 aa		19.77	■□□□□ 0.76
PNCK-231	ENST00000488994	PBX4	Q9BYU1	374 aa		19.77	■□□□□ 0.76
PNCK-231	ENST00000488994	TMEM161A	Q9NX61	479 aa		19.77	■□□□□ 0.76
PNCK-231	ENST00000488994	KANSL3	Q9P2N6	904 aa		19.77	■□□□□ 0.76
PNCK-231	ENST00000488994	PPP2R2C	Q9Y2T4	447 aa		19.77	■□□□□ 0.76
PNCK-231	ENST00000488994	PIR	O00625	290 aa		19.76	■□□□□ 0.75
PNCK-231	ENST00000488994	ENPP3	O14638	875 aa		19.76	■□□□□ 0.75
PNCK-231	ENST00000488994	PTGES	O14684	152 aa		19.76	■□□□□ 0.75

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms