RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 GRIN2CQ14957 1233 aa12.26□□□□□ -0.45
NUP50-216ENST00000486184 ZNF699Q32M78 642 aa12.26□□□□□ -0.45
NUP50-216ENST00000486184 USP41Q3LFD5 358 aa12.26□□□□□ -0.45
NUP50-216ENST00000486184 ZACNQ401N2 412 aa12.26□□□□□ -0.45
NUP50-216ENST00000486184 FAM171A1Q5VUB5 890 aa12.26□□□□□ -0.45
NUP50-216ENST00000486184 TDRD10Q5VZ19 366 aaKnown RBP12.26□□□□□ -0.45
NUP50-216ENST00000486184 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.26□□□□□ -0.45
NUP50-216ENST00000486184 SV2AQ7L0J3 742 aa12.26□□□□□ -0.45
NUP50-216ENST00000486184 TRIM59Q8IWR1 403 aa12.26□□□□□ -0.45
NUP50-216ENST00000486184 DEFB123Q8N688 67 aa12.26□□□□□ -0.45
NUP50-216ENST00000486184 C3orf58Q8NDZ4 430 aa12.26□□□□□ -0.45
NUP50-216ENST00000486184 SPPL3Q8TCT6 385 aa12.26□□□□□ -0.45
NUP50-216ENST00000486184 BCL7CQ8WUZ0 217 aaPredicted RBP12.26□□□□□ -0.45
NUP50-216ENST00000486184 ZNF516Q92618 1163 aa12.26□□□□□ -0.45
NUP50-216ENST00000486184 PPP2R3CQ969Q6 453 aa12.26□□□□□ -0.45
NUP50-216ENST00000486184 SLC35C1Q96A29 364 aa12.26□□□□□ -0.45
NUP50-216ENST00000486184 BORCS6Q96GS4 357 aa12.26□□□□□ -0.45
NUP50-216ENST00000486184 HPDLQ96IR7 371 aa12.26□□□□□ -0.45
NUP50-216ENST00000486184 TCF25Q9BQ70 676 aa12.26□□□□□ -0.45
NUP50-216ENST00000486184 HERC2P3Q9BVR0 1158 aa12.26□□□□□ -0.45
NUP50-216ENST00000486184 RTN4Q9NQC3 1192 aaKnown RBP12.26□□□□□ -0.45
NUP50-216ENST00000486184 SAMSN1Q9NSI8 373 aaKnown RBP12.26□□□□□ -0.45
NUP50-216ENST00000486184 FANCLQ9NW38 375 aa12.26□□□□□ -0.45
NUP50-216ENST00000486184 EPOPA6NHQ4 379 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 KPNA7A9QM74 516 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 I3L4J1 428 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 RFXAPO00287 272 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 HUS1O60921 280 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 C4BPAP04003 597 aaKnown RBP12.25□□□□□ -0.45
NUP50-216ENST00000486184 P4HA1P13674 534 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 IGFBP4P22692 258 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 ATICP31939 592 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 FMO5P49326 533 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 LILRA4P59901 499 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 TNNC1P63316 161 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 CREMQ03060 361 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 KCNH2Q12809 1159 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 SMC1AQ14683 1233 aaKnown RBP12.25□□□□□ -0.45
NUP50-216ENST00000486184 MAN2A1Q16706 1144 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 SGSM1Q2NKQ1 1148 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 TCP11X2Q5H9J9 407 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 WDR44Q5JSH3 913 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 C1orf220Q5T0J3 134 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 PLPP4Q5VZY2 271 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 PDE12Q6L8Q7 609 aaKnown RBP12.25□□□□□ -0.45
NUP50-216ENST00000486184 PDXDC1Q6P996 788 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 Q7L0L9 218 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 METTL23Q86XA0 190 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 TMEM130Q8N3G9 435 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 FBXL13Q8NEE6 735 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 APPL2Q8NEU8 664 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 FAM200AQ8TCP9 573 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 TAF4BQ92750 862 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 SUSD3Q96L08 255 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 PHF12Q96QT6 1004 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 TUBGCP2Q9BSJ2 902 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 TTPALQ9BTX7 342 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 GPR62Q9BZJ7 368 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 NGRNQ9NPE2 291 aaKnown RBP12.25□□□□□ -0.45
NUP50-216ENST00000486184 MRPL17Q9NRX2 175 aaKnown RBP12.25□□□□□ -0.45
NUP50-216ENST00000486184 SIX4Q9UIU6 781 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 DSEQ9UL01 958 aa12.25□□□□□ -0.45
NUP50-216ENST00000486184 RANBP2P49792 3224 aaKnown RBP12.25□□□□□ -0.45
NUP50-216ENST00000486184 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.24□□□□□ -0.45
NUP50-216ENST00000486184 C2CD2LO14523 706 aa12.24□□□□□ -0.45
NUP50-216ENST00000486184 CYB561D2O14569 222 aa12.24□□□□□ -0.45
NUP50-216ENST00000486184 SYN3O14994 580 aa12.24□□□□□ -0.45
NUP50-216ENST00000486184 HLA-DRAP01903 254 aa12.24□□□□□ -0.45
NUP50-216ENST00000486184 CTSAP10619 480 aa12.24□□□□□ -0.45
NUP50-216ENST00000486184 ZNF445P59923 1031 aa12.24□□□□□ -0.45
NUP50-216ENST00000486184 MYL6P60660 151 aa12.24□□□□□ -0.45
NUP50-216ENST00000486184 WDR72Q3MJ13 1102 aa12.24□□□□□ -0.45
NUP50-216ENST00000486184 TIGD5Q53EQ6 642 aa12.24□□□□□ -0.45
NUP50-216ENST00000486184 ZNF667Q5HYK9 610 aa12.24□□□□□ -0.45
NUP50-216ENST00000486184 CDKAL1Q5VV42 579 aa12.24□□□□□ -0.45
NUP50-216ENST00000486184 IRF2BP1Q8IU81 584 aa12.24□□□□□ -0.45
NUP50-216ENST00000486184 DHX40Q8IX18 779 aaKnown RBP12.24□□□□□ -0.45
NUP50-216ENST00000486184 RIN2Q8WYP3 895 aaPredicted RBP12.24□□□□□ -0.45
NUP50-216ENST00000486184 MRPL38Q96DV4 380 aaKnown RBP12.24□□□□□ -0.45
NUP50-216ENST00000486184 SENP8Q96LD8 212 aa12.24□□□□□ -0.45
NUP50-216ENST00000486184 MMS19Q96T76 1030 aa12.24□□□□□ -0.45
NUP50-216ENST00000486184 ZBP1Q9H171 429 aa12.24□□□□□ -0.45
NUP50-216ENST00000486184 CBX8Q9HC52 389 aa12.24□□□□□ -0.45
NUP50-216ENST00000486184 PCDHB8Q9UN66 801 aa12.24□□□□□ -0.45
NUP50-216ENST00000486184 SNX9Q9Y5X1 595 aa12.24□□□□□ -0.45
NUP50-216ENST00000486184 H7C4K7 107 aa12.23□□□□□ -0.45
NUP50-216ENST00000486184 M0QZQ0 153 aa12.23□□□□□ -0.45
NUP50-216ENST00000486184 P4HA2O15460 535 aa12.23□□□□□ -0.45
NUP50-216ENST00000486184 VNN1O95497 513 aa12.23□□□□□ -0.45
NUP50-216ENST00000486184 CXCL14O95715 111 aa12.23□□□□□ -0.45
NUP50-216ENST00000486184 CST3P01034 146 aaPredicted RBP12.23□□□□□ -0.45
NUP50-216ENST00000486184 DNAJB1P25685 340 aa12.23□□□□□ -0.45
NUP50-216ENST00000486184 TKTP29401 623 aaKnown RBP12.23□□□□□ -0.45
NUP50-216ENST00000486184 MCCD1P59942 119 aaPredicted RBP12.23□□□□□ -0.45
NUP50-216ENST00000486184 ERVFC1P60507 584 aa12.23□□□□□ -0.45
NUP50-216ENST00000486184 DSG1Q02413 1049 aa12.23□□□□□ -0.45
NUP50-216ENST00000486184 YWHAHQ04917 246 aaPredicted RBP12.23□□□□□ -0.45
NUP50-216ENST00000486184 PSMD5Q16401 504 aa12.23□□□□□ -0.45
NUP50-216ENST00000486184 CBWD6Q4V339 395 aa12.23□□□□□ -0.45
NUP50-216ENST00000486184 CBWD3Q5JTY5 395 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms