RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 CCDC183Q5T5S1 534 aa11.68□□□□□ -0.54
ATG4B-219ENST00000479941 DSTYKQ6XUX3 929 aa11.68□□□□□ -0.54
ATG4B-219ENST00000479941 ANKS3Q6ZW76 656 aa11.68□□□□□ -0.54
ATG4B-219ENST00000479941 TRAPPC11Q7Z392 1133 aa11.68□□□□□ -0.54
ATG4B-219ENST00000479941 TMEM130Q8N3G9 435 aa11.68□□□□□ -0.54
ATG4B-219ENST00000479941 CSGALNACT2Q8N6G5 542 aa11.68□□□□□ -0.54
ATG4B-219ENST00000479941 CXorf38Q8TB03 319 aa11.68□□□□□ -0.54
ATG4B-219ENST00000479941 PLEKHO2Q8TD55 490 aa11.68□□□□□ -0.54
ATG4B-219ENST00000479941 HLA-CQ95604 372 aa11.68□□□□□ -0.54
ATG4B-219ENST00000479941 CEP63Q96MT8 703 aa11.68□□□□□ -0.54
ATG4B-219ENST00000479941 KLHL5Q96PQ7 755 aa11.68□□□□□ -0.54
ATG4B-219ENST00000479941 DACH1Q9UI36 760 aa11.68□□□□□ -0.54
ATG4B-219ENST00000479941 PCDHB8Q9UN66 801 aa11.68□□□□□ -0.54
ATG4B-219ENST00000479941 CTNND2Q9UQB3 1225 aa11.68□□□□□ -0.54
ATG4B-219ENST00000479941 ATG2AQ2TAZ0 1938 aa11.68□□□□□ -0.54
ATG4B-219ENST00000479941 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.67□□□□□ -0.54
ATG4B-219ENST00000479941 KPNA7A9QM74 516 aa11.67□□□□□ -0.54
ATG4B-219ENST00000479941 H7C4K7 107 aa11.67□□□□□ -0.54
ATG4B-219ENST00000479941 I3L4J1 428 aa11.67□□□□□ -0.54
ATG4B-219ENST00000479941 SPTLC1O15269 473 aa11.67□□□□□ -0.54
ATG4B-219ENST00000479941 TEX28O15482 410 aa11.67□□□□□ -0.54
ATG4B-219ENST00000479941 ODC1P11926 461 aa11.67□□□□□ -0.54
ATG4B-219ENST00000479941 TYMPP19971 482 aa11.67□□□□□ -0.54
ATG4B-219ENST00000479941 KLRC2P26717 231 aa11.67□□□□□ -0.54
ATG4B-219ENST00000479941 GTF2F1P35269 517 aaKnown RBP eCLIP11.67□□□□□ -0.54
ATG4B-219ENST00000479941 NDUFV1P49821 464 aa11.67□□□□□ -0.54
ATG4B-219ENST00000479941 VAMP7P51809 220 aa11.67□□□□□ -0.54
ATG4B-219ENST00000479941 BFSP1Q12934 665 aa11.67□□□□□ -0.54
ATG4B-219ENST00000479941 MYO1EQ12965 1108 aa11.67□□□□□ -0.54
ATG4B-219ENST00000479941 KCNC3Q14003 757 aa11.67□□□□□ -0.54
ATG4B-219ENST00000479941 CT47A1Q5JQC4 288 aaPredicted RBP11.67□□□□□ -0.54
ATG4B-219ENST00000479941 VARS2Q5ST30 1063 aaKnown RBP11.67□□□□□ -0.54
ATG4B-219ENST00000479941 TTI2Q6NXR4 508 aa11.67□□□□□ -0.54
ATG4B-219ENST00000479941 PRSS55Q6UWB4 352 aaPredicted RBP11.67□□□□□ -0.54
ATG4B-219ENST00000479941 TMEM184AQ6ZMB5 413 aa11.67□□□□□ -0.54
ATG4B-219ENST00000479941 FILIP1Q7Z7B0 1213 aa11.67□□□□□ -0.54
ATG4B-219ENST00000479941 ZNF516Q92618 1163 aa11.67□□□□□ -0.54
ATG4B-219ENST00000479941 EEF2KMTQ96G04 330 aa11.67□□□□□ -0.54
ATG4B-219ENST00000479941 BORCS6Q96GS4 357 aa11.67□□□□□ -0.54
ATG4B-219ENST00000479941 SENP8Q96LD8 212 aa11.67□□□□□ -0.54
ATG4B-219ENST00000479941 DUSP9Q99956 384 aaKnown RBP11.67□□□□□ -0.54
ATG4B-219ENST00000479941 OXCT2Q9BYC2 517 aaPredicted RBP11.67□□□□□ -0.54
ATG4B-219ENST00000479941 UBE2ZQ9H832 354 aaPredicted RBP11.67□□□□□ -0.54
ATG4B-219ENST00000479941 CLDND1Q9NY35 253 aa11.67□□□□□ -0.54
ATG4B-219ENST00000479941 MTRRQ9UBK8 725 aa11.67□□□□□ -0.54
ATG4B-219ENST00000479941 DPP7Q9UHL4 492 aa11.67□□□□□ -0.54
ATG4B-219ENST00000479941 SIX4Q9UIU6 781 aa11.67□□□□□ -0.54
ATG4B-219ENST00000479941 RWDD2AQ9UIY3 292 aa11.67□□□□□ -0.54
ATG4B-219ENST00000479941 DSEQ9UL01 958 aa11.67□□□□□ -0.54
ATG4B-219ENST00000479941 BACE2Q9Y5Z0 518 aa11.67□□□□□ -0.54
ATG4B-219ENST00000479941 HCFC2Q9Y5Z7 792 aa11.67□□□□□ -0.54
ATG4B-219ENST00000479941 STX10O60499 249 aa11.66□□□□□ -0.54
ATG4B-219ENST00000479941 PHACTR2O75167 634 aa11.66□□□□□ -0.54
ATG4B-219ENST00000479941 FGFR1OPO95684 399 aaKnown RBP11.66□□□□□ -0.54
ATG4B-219ENST00000479941 C4BPAP04003 597 aaKnown RBP11.66□□□□□ -0.54
ATG4B-219ENST00000479941 CLCN4P51793 760 aa11.66□□□□□ -0.54
ATG4B-219ENST00000479941 STX17P56962 302 aa11.66□□□□□ -0.54
ATG4B-219ENST00000479941 DLG4P78352 724 aa11.66□□□□□ -0.54
ATG4B-219ENST00000479941 YWHAHQ04917 246 aaPredicted RBP11.66□□□□□ -0.54
ATG4B-219ENST00000479941 BIRC3Q13489 604 aa11.66□□□□□ -0.54
ATG4B-219ENST00000479941 TRPC3Q13507 836 aa11.66□□□□□ -0.54
ATG4B-219ENST00000479941 MRPL58Q14197 206 aaKnown RBP11.66□□□□□ -0.54
ATG4B-219ENST00000479941 ZNF280DQ6N043 979 aa11.66□□□□□ -0.54
ATG4B-219ENST00000479941 EP400NLQ6ZTU2 488 aa11.66□□□□□ -0.54
ATG4B-219ENST00000479941 CASP10Q92851 521 aa11.66□□□□□ -0.54
ATG4B-219ENST00000479941 SYAP1Q96A49 352 aaPredicted RBP11.66□□□□□ -0.54
ATG4B-219ENST00000479941 FAM84AQ96KN4 292 aa11.66□□□□□ -0.54
ATG4B-219ENST00000479941 CLSTN3Q9BQT9 956 aa11.66□□□□□ -0.54
ATG4B-219ENST00000479941 METTL14Q9HCE5 456 aaKnown RBP11.66□□□□□ -0.54
ATG4B-219ENST00000479941 THEGQ9P2T0 379 aa11.66□□□□□ -0.54
ATG4B-219ENST00000479941 VWA8A3KMH1 1905 aa11.65□□□□□ -0.54
ATG4B-219ENST00000479941 CYB561D2O14569 222 aa11.65□□□□□ -0.54
ATG4B-219ENST00000479941 LINC01565O15544 149 aa11.65□□□□□ -0.54
ATG4B-219ENST00000479941 TBC1D4O60343 1298 aa11.65□□□□□ -0.54
ATG4B-219ENST00000479941 OAZ2O95190 189 aa11.65□□□□□ -0.54
ATG4B-219ENST00000479941 STAU1O95793 577 aaKnown RBP11.65□□□□□ -0.54
ATG4B-219ENST00000479941 GNA14O95837 355 aa11.65□□□□□ -0.54
ATG4B-219ENST00000479941 GLP2RO95838 553 aa11.65□□□□□ -0.54
ATG4B-219ENST00000479941 GLUD1P00367 558 aa11.65□□□□□ -0.54
ATG4B-219ENST00000479941 CST3P01034 146 aaPredicted RBP11.65□□□□□ -0.54
ATG4B-219ENST00000479941 CYP11A1P05108 521 aa11.65□□□□□ -0.54
ATG4B-219ENST00000479941 RPL17P18621 184 aaKnown RBP11.65□□□□□ -0.54
ATG4B-219ENST00000479941 ERCC5P28715 1186 aaPredicted RBP11.65□□□□□ -0.54
ATG4B-219ENST00000479941 ATICP31939 592 aa11.65□□□□□ -0.54
ATG4B-219ENST00000479941 GTF2H1P32780 548 aa11.65□□□□□ -0.54
ATG4B-219ENST00000479941 LTBRP36941 435 aa11.65□□□□□ -0.54
ATG4B-219ENST00000479941 AAK1Q2M2I8 961 aa11.65□□□□□ -0.54
ATG4B-219ENST00000479941 KLHL40Q2TBA0 621 aa11.65□□□□□ -0.54
ATG4B-219ENST00000479941 DPCR1Q3MIW9 517 aa11.65□□□□□ -0.54
ATG4B-219ENST00000479941 ZACNQ401N2 412 aa11.65□□□□□ -0.54
ATG4B-219ENST00000479941 CTXN3Q4LDR2 81 aa11.65□□□□□ -0.54
ATG4B-219ENST00000479941 C1orf220Q5T0J3 134 aa11.65□□□□□ -0.54
ATG4B-219ENST00000479941 TDRD10Q5VZ19 366 aaKnown RBP11.65□□□□□ -0.54
ATG4B-219ENST00000479941 SLC8B1Q6J4K2 584 aa11.65□□□□□ -0.54
ATG4B-219ENST00000479941 LLGL2Q6P1M3 1020 aa11.65□□□□□ -0.54
ATG4B-219ENST00000479941 ELMSAN1Q6PJG2 1045 aa11.65□□□□□ -0.54
ATG4B-219ENST00000479941 SASS6Q6UVJ0 657 aa11.65□□□□□ -0.54
ATG4B-219ENST00000479941 C15orf39Q6ZRI6 1047 aa11.65□□□□□ -0.54
ATG4B-219ENST00000479941 DPH6Q7L8W6 267 aa11.65□□□□□ -0.54
ATG4B-219ENST00000479941 FRMD5Q7Z6J6 570 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms