RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 C10orf53Q8N6V4 93 aa5.67□□□□□ -1.5
USF3-202ENST00000478658 APOL6Q9BWW8 343 aa5.67□□□□□ -1.5
USF3-202ENST00000478658 SLC39A8Q9C0K1 460 aa5.67□□□□□ -1.5
USF3-202ENST00000478658 GGNBP2Q9H3C7 697 aa5.67□□□□□ -1.5
USF3-202ENST00000478658 SMYD3Q9H7B4 428 aa5.67□□□□□ -1.5
USF3-202ENST00000478658 TMCO1Q9UM00 188 aa5.67□□□□□ -1.5
USF3-202ENST00000478658 PEG3Q9GZU2 1588 aa5.67□□□□□ -1.5
USF3-202ENST00000478658 ZMYM2Q9UBW7 1377 aa5.67□□□□□ -1.5
USF3-202ENST00000478658 MFAP3LO75121 409 aa5.67□□□□□ -1.5
USF3-202ENST00000478658 MYBL1P10243 752 aa5.67□□□□□ -1.5
USF3-202ENST00000478658 TBXAS1P24557 533 aaPredicted RBP5.67□□□□□ -1.5
USF3-202ENST00000478658 GUCY1A2P33402 732 aa5.67□□□□□ -1.5
USF3-202ENST00000478658 GNA12Q03113 381 aa5.67□□□□□ -1.5
USF3-202ENST00000478658 P3H1Q32P28 736 aa5.67□□□□□ -1.5
USF3-202ENST00000478658 MDH1BQ5I0G3 518 aa5.67□□□□□ -1.5
USF3-202ENST00000478658 PAPD7Q5XG87 772 aaKnown RBP5.67□□□□□ -1.5
USF3-202ENST00000478658 KIAA0408Q6ZU52 694 aa5.67□□□□□ -1.5
USF3-202ENST00000478658 LRRC70Q7Z2Q7 622 aa5.67□□□□□ -1.5
USF3-202ENST00000478658 P3H2Q8IVL5 708 aa5.67□□□□□ -1.5
USF3-202ENST00000478658 SVOPQ8N4V2 548 aa5.67□□□□□ -1.5
USF3-202ENST00000478658 SAMD3Q8N6K7 520 aa5.67□□□□□ -1.5
USF3-202ENST00000478658 MAGEC3Q8TD91 643 aa5.67□□□□□ -1.5
USF3-202ENST00000478658 CYFIP2Q96F07 1278 aa5.67□□□□□ -1.5
USF3-202ENST00000478658 NT5C1BQ96P26 610 aa5.67□□□□□ -1.5
USF3-202ENST00000478658 ZWILCHQ9H900 591 aa5.67□□□□□ -1.5
USF3-202ENST00000478658 RPA1P27694 616 aa5.67□□□□□ -1.5
USF3-202ENST00000478658 ALDH3A2P51648 485 aa5.67□□□□□ -1.5
USF3-202ENST00000478658 CHN2P52757 468 aa5.67□□□□□ -1.5
USF3-202ENST00000478658 PFKFB3Q16875 520 aaPredicted RBP5.67□□□□□ -1.5
USF3-202ENST00000478658 KLHL40Q2TBA0 621 aa5.67□□□□□ -1.5
USF3-202ENST00000478658 NAA35Q5VZE5 725 aa5.67□□□□□ -1.5
USF3-202ENST00000478658 CYP4F22Q6NT55 531 aa5.67□□□□□ -1.5
USF3-202ENST00000478658 AMIGO1Q86WK6 493 aa5.67□□□□□ -1.5
USF3-202ENST00000478658 THAP11Q96EK4 314 aa5.67□□□□□ -1.5
USF3-202ENST00000478658 CDK19Q9BWU1 502 aa5.67□□□□□ -1.5
USF3-202ENST00000478658 AXIN1O15169 862 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 SAT1P21673 171 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 KYNUQ16719 465 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 EAPPQ56P03 285 aaPredicted RBP5.66□□□□□ -1.5
USF3-202ENST00000478658 RC3H1Q5TC82 1133 aaKnown RBP5.66□□□□□ -1.5
USF3-202ENST00000478658 MFSD14CQ5VZR4 134 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 HEATR6Q6AI08 1181 aaKnown RBP5.66□□□□□ -1.5
USF3-202ENST00000478658 DARS2Q6PI48 645 aaKnown RBP5.66□□□□□ -1.5
USF3-202ENST00000478658 NANOGNBQ7Z5D8 188 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 AK8Q96MA6 479 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 PNKPQ96T60 521 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 BBS2Q9BXC9 721 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 USP44Q9H0E7 712 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 C12orf4Q9NQ89 552 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 RASSF1Q9NS23 344 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 CKLFQ9UBR5 152 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 PHF11Q9UIL8 331 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 SLC12A4Q9UP95 1085 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 PCDHA5Q9Y5H7 936 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 TRPM2O94759 1503 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 STRNO43815 780 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 KRT33AO76009 404 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 PSAPP07602 524 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 TFCP2Q12800 502 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 IFT88Q13099 833 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 NAA30Q147X3 362 aaPredicted RBP5.66□□□□□ -1.5
USF3-202ENST00000478658 SKIV2LQ15477 1246 aaKnown RBP5.66□□□□□ -1.5
USF3-202ENST00000478658 ERAP2Q6P179 960 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 RFX8Q6ZV50 586 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 UNC45BQ8IWX7 931 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 DCLK2Q8N568 766 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 BTBD6Q96KE9 485 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 PRMT6Q96LA8 375 aaPredicted RBP5.66□□□□□ -1.5
USF3-202ENST00000478658 WDR11Q9BZH6 1224 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 NECTIN3Q9NQS3 549 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 TJP2Q9UDY2 1190 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 NAIPQ13075 1403 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 A0A087X0T9 212 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 FGRP09769 529 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 HSMCR30P0CW71 290 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 S100A12P80511 92 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 TFDP2Q14188 446 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 DNAJC24Q6P3W2 148 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 CHPFQ8IZ52 775 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 GMCL1Q96IK5 515 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 COPS4Q9BT78 406 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 ZCCHC2Q9C0B9 1178 aaKnown RBP5.66□□□□□ -1.5
USF3-202ENST00000478658 CAB39LQ9H9S4 337 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 PCMTD2Q9NV79 361 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 MEMO1Q9Y316 297 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 KATNA1O75449 491 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 MYL2P10916 166 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 ERCC2P18074 760 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 ADRA2BP18089 450 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 ETFBP38117 255 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 MAPK9P45984 424 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 HSD17B4P51659 736 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 GPS1Q13098 491 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 SYCE2Q6PIF2 218 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 GIMAP5Q96F15 307 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 EXOC2Q96KP1 924 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 IDI2Q9BXS1 227 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 FUT8Q9BYC5 575 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 ASNSD1Q9NWL6 643 aa5.66□□□□□ -1.5
USF3-202ENST00000478658 TEX14Q8IWB6 1497 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms