RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 APPL2Q8NEU8 664 aa8.96□□□□□ -0.98
HDAC6-221ENST00000477561 EDAQ92838 391 aa8.96□□□□□ -0.98
HDAC6-221ENST00000477561 ACSF2Q96CM8 615 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-221ENST00000477561 PAGE5Q96GU1 130 aa8.96□□□□□ -0.98
HDAC6-221ENST00000477561 ASB7Q9H672 318 aa8.96□□□□□ -0.98
HDAC6-221ENST00000477561 MAGEF1Q9HAY2 307 aa8.96□□□□□ -0.98
HDAC6-221ENST00000477561 WDR6Q9NNW5 1121 aaKnown RBP8.96□□□□□ -0.98
HDAC6-221ENST00000477561 SLC39A2Q9NP94 309 aa8.96□□□□□ -0.98
HDAC6-221ENST00000477561 ZDHHC7Q9NXF8 308 aa8.96□□□□□ -0.98
HDAC6-221ENST00000477561 DPP3Q9NY33 737 aa8.96□□□□□ -0.98
HDAC6-221ENST00000477561 RBAKQ9NYW8 714 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-221ENST00000477561 FBXL5Q9UKA1 691 aa8.96□□□□□ -0.98
HDAC6-221ENST00000477561 PCDHB8Q9UN66 801 aa8.96□□□□□ -0.98
HDAC6-221ENST00000477561 USTQ9Y2C2 406 aa8.96□□□□□ -0.98
HDAC6-221ENST00000477561 CLUHO75153 1309 aa8.96□□□□□ -0.98
HDAC6-221ENST00000477561 ANO9A1A5B4 782 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 M0QZQ0 153 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 PIRO00625 290 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 PRRG1O14668 218 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 EXTL3O43909 919 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 IL18RAPO95256 599 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 SEC24AO95486 1093 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 LDHAP00338 332 aaKnown RBP8.95□□□□□ -0.98
HDAC6-221ENST00000477561 OR4Q2P0C623 313 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 PRR29P0C7W0 189 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 CPB1P15086 417 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 ELF1P32519 619 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 SYKP43405 635 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 NDUFA8P51970 172 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 LILRA4P59901 499 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 YWHAHQ04917 246 aaPredicted RBP8.95□□□□□ -0.98
HDAC6-221ENST00000477561 PTPN21Q16825 1174 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 CCDC183Q5T5S1 534 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 LMBRD2Q68DH5 695 aaPredicted RBP8.95□□□□□ -0.98
HDAC6-221ENST00000477561 SLC8B1Q6J4K2 584 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 ZNF280DQ6N043 979 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 CAVIN1Q6NZI2 390 aaKnown RBP8.95□□□□□ -0.98
HDAC6-221ENST00000477561 CNNM4Q6P4Q7 775 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 CYP26C1Q6V0L0 522 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 TRIM67Q6ZTA4 783 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 GET4Q7L5D6 327 aaPredicted RBP8.95□□□□□ -0.98
HDAC6-221ENST00000477561 EPM2AIP1Q7L775 607 aaPredicted RBP8.95□□□□□ -0.98
HDAC6-221ENST00000477561 USP37Q86T82 979 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 BRSK2Q8IWQ3 736 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 ZDHHC14Q8IZN3 488 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 GPD1LQ8N335 351 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 PLCD3Q8N3E9 789 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 FSIP1Q8NA03 581 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 RDH13Q8NBN7 331 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 ZNF461Q8TAF7 563 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 ZNF507Q8TCN5 953 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 SCFD1Q8WVM8 642 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 RSAD2Q8WXG1 361 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 SENP8Q96LD8 212 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 MYADMQ96S97 322 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 TSPAN18Q96SJ8 248 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 PYM1Q9BRP8 204 aaKnown RBP8.95□□□□□ -0.98
HDAC6-221ENST00000477561 CYP4F11Q9HBI6 524 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 PDE11AQ9HCR9 933 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 HCFC1R1Q9NWW0 138 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 HPSEQ9Y251 543 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 DERAQ9Y315 318 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 C2CD2Q9Y426 696 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 PDCD11Q14690 1871 aaKnown RBP8.95□□□□□ -0.98
HDAC6-221ENST00000477561 TRIOO75962 3097 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 C2orf16Q68DN1 1984 aa8.95□□□□□ -0.98
HDAC6-221ENST00000477561 PVALEFA0A1B0GWK0 134 aa8.94□□□□□ -0.98
HDAC6-221ENST00000477561 PRR33A8MZF0 331 aa8.94□□□□□ -0.98
HDAC6-221ENST00000477561 CYB561D2O14569 222 aa8.94□□□□□ -0.98
HDAC6-221ENST00000477561 EIF3DO15371 548 aaKnown RBP eCLIP8.94□□□□□ -0.98
HDAC6-221ENST00000477561 TGFB1I1O43294 461 aa8.94□□□□□ -0.98
HDAC6-221ENST00000477561 KLRC4O43908 158 aa8.94□□□□□ -0.98
HDAC6-221ENST00000477561 XYLBO75191 536 aa8.94□□□□□ -0.98
HDAC6-221ENST00000477561 ABLIM3O94929 683 aa8.94□□□□□ -0.98
HDAC6-221ENST00000477561 LRG1P02750 347 aa8.94□□□□□ -0.98
HDAC6-221ENST00000477561 ITGB3P05106 788 aa8.94□□□□□ -0.98
HDAC6-221ENST00000477561 HNRNPA1P09651 372 aaKnown RBP eCLIP8.94□□□□□ -0.98
HDAC6-221ENST00000477561 ODC1P11926 461 aa8.94□□□□□ -0.98
HDAC6-221ENST00000477561 FSHRP23945 695 aa8.94□□□□□ -0.98
HDAC6-221ENST00000477561 POLR2BP30876 1174 aaKnown RBP8.94□□□□□ -0.98
HDAC6-221ENST00000477561 AARSP49588 968 aaKnown RBP eCLIP8.94□□□□□ -0.98
HDAC6-221ENST00000477561 CYP2J2P51589 502 aa8.94□□□□□ -0.98
HDAC6-221ENST00000477561 EHHADHQ08426 723 aa8.94□□□□□ -0.98
HDAC6-221ENST00000477561 ADCY1Q08828 1119 aa8.94□□□□□ -0.98
HDAC6-221ENST00000477561 STK4Q13043 487 aa8.94□□□□□ -0.98
HDAC6-221ENST00000477561 UVSSAQ2YD98 709 aa8.94□□□□□ -0.98
HDAC6-221ENST00000477561 KMT5BQ4FZB7 885 aa8.94□□□□□ -0.98
HDAC6-221ENST00000477561 RNF19BQ6ZMZ0 732 aa8.94□□□□□ -0.98
HDAC6-221ENST00000477561 HFE2Q6ZVN8 426 aa8.94□□□□□ -0.98
HDAC6-221ENST00000477561 CBWD2Q8IUF1 395 aa8.94□□□□□ -0.98
HDAC6-221ENST00000477561 PGLYRP2Q96PD5 576 aa8.94□□□□□ -0.98
HDAC6-221ENST00000477561 TMEM209Q96SK2 561 aa8.94□□□□□ -0.98
HDAC6-221ENST00000477561 RHOBTB2Q9BYZ6 727 aa8.94□□□□□ -0.98
HDAC6-221ENST00000477561 GOLPH3LQ9H4A5 285 aa8.94□□□□□ -0.98
HDAC6-221ENST00000477561 KCNK12Q9HB15 430 aa8.94□□□□□ -0.98
HDAC6-221ENST00000477561 AGPAT3Q9NRZ7 376 aa8.94□□□□□ -0.98
HDAC6-221ENST00000477561 HSPBP1Q9NZL4 362 aa8.94□□□□□ -0.98
HDAC6-221ENST00000477561 DNMT3BQ9UBC3 853 aaKnown RBP8.94□□□□□ -0.98
HDAC6-221ENST00000477561 AGAP1Q9UPQ3 857 aa8.94□□□□□ -0.98
HDAC6-221ENST00000477561 SORCS3Q9UPU3 1222 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms