RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 ZNF233A6NK53 670 aa13.64□□□□□ -0.23
PPP1R3F-204ENST00000471261 PIRO00625 290 aa13.64□□□□□ -0.23
PPP1R3F-204ENST00000471261 PRRG1O14668 218 aa13.64□□□□□ -0.23
PPP1R3F-204ENST00000471261 KIAA0391O15091 583 aaKnown RBP13.64□□□□□ -0.23
PPP1R3F-204ENST00000471261 SPTLC1O15269 473 aa13.64□□□□□ -0.23
PPP1R3F-204ENST00000471261 CCL16O15467 120 aa13.64□□□□□ -0.23
PPP1R3F-204ENST00000471261 TGFB1I1O43294 461 aa13.64□□□□□ -0.23
PPP1R3F-204ENST00000471261 KLRC4O43908 158 aa13.64□□□□□ -0.23
PPP1R3F-204ENST00000471261 ZNF202O95125 648 aa13.64□□□□□ -0.23
PPP1R3F-204ENST00000471261 RPN1P04843 607 aaKnown RBP13.64□□□□□ -0.23
PPP1R3F-204ENST00000471261 MYL1P05976 194 aa13.64□□□□□ -0.23
PPP1R3F-204ENST00000471261 PRR29P0C7W0 189 aa13.64□□□□□ -0.23
PPP1R3F-204ENST00000471261 ODC1P11926 461 aa13.64□□□□□ -0.23
PPP1R3F-204ENST00000471261 CPB1P15086 417 aa13.64□□□□□ -0.23
PPP1R3F-204ENST00000471261 STK4Q13043 487 aa13.64□□□□□ -0.23
PPP1R3F-204ENST00000471261 MRPL58Q14197 206 aaKnown RBP13.64□□□□□ -0.23
PPP1R3F-204ENST00000471261 KNOP1Q1ED39 458 aaKnown RBP13.64□□□□□ -0.23
PPP1R3F-204ENST00000471261 LMBRD2Q68DH5 695 aaPredicted RBP13.64□□□□□ -0.23
PPP1R3F-204ENST00000471261 CYP26C1Q6V0L0 522 aa13.64□□□□□ -0.23
PPP1R3F-204ENST00000471261 OTOP3Q7RTS5 596 aa13.64□□□□□ -0.23
PPP1R3F-204ENST00000471261 NT5DC4Q86YG4 428 aa13.64□□□□□ -0.23
PPP1R3F-204ENST00000471261 ZNF461Q8TAF7 563 aa13.64□□□□□ -0.23
PPP1R3F-204ENST00000471261 CACTINQ8WUQ7 758 aaKnown RBP13.64□□□□□ -0.23
PPP1R3F-204ENST00000471261 ACSF2Q96CM8 615 aaPredicted RBP13.64□□□□□ -0.23
PPP1R3F-204ENST00000471261 FAM84AQ96KN4 292 aa13.64□□□□□ -0.23
PPP1R3F-204ENST00000471261 SENP8Q96LD8 212 aa13.64□□□□□ -0.23
PPP1R3F-204ENST00000471261 WDR6Q9NNW5 1121 aaKnown RBP13.64□□□□□ -0.23
PPP1R3F-204ENST00000471261 CLUHO75153 1309 aa13.64□□□□□ -0.23
PPP1R3F-204ENST00000471261 ANO9A1A5B4 782 aa13.63□□□□□ -0.23
PPP1R3F-204ENST00000471261 XYLBO75191 536 aa13.63□□□□□ -0.23
PPP1R3F-204ENST00000471261 ITGB3P05106 788 aa13.63□□□□□ -0.23
PPP1R3F-204ENST00000471261 KRT19P08727 400 aa13.63□□□□□ -0.23
PPP1R3F-204ENST00000471261 TMEM191BP0C7N4 346 aa13.63□□□□□ -0.23
PPP1R3F-204ENST00000471261 POLR2BP30876 1174 aaKnown RBP13.63□□□□□ -0.23
PPP1R3F-204ENST00000471261 GBP2P32456 591 aaPredicted RBP13.63□□□□□ -0.23
PPP1R3F-204ENST00000471261 AARSP49588 968 aaKnown RBP eCLIP13.63□□□□□ -0.23
PPP1R3F-204ENST00000471261 TAF6P49848 677 aa13.63□□□□□ -0.23
PPP1R3F-204ENST00000471261 PSMD2Q13200 908 aa13.63□□□□□ -0.23
PPP1R3F-204ENST00000471261 SNRNP35Q16560 246 aaKnown RBP13.63□□□□□ -0.23
PPP1R3F-204ENST00000471261 TMEM31Q5JXX7 168 aa13.63□□□□□ -0.23
PPP1R3F-204ENST00000471261 OVOS1Q6IE37 1185 aa13.63□□□□□ -0.23
PPP1R3F-204ENST00000471261 KRBA2Q6ZNG9 492 aa13.63□□□□□ -0.23
PPP1R3F-204ENST00000471261 GET4Q7L5D6 327 aaPredicted RBP13.63□□□□□ -0.23
PPP1R3F-204ENST00000471261 GRASPQ7Z6J2 395 aaPredicted RBP13.63□□□□□ -0.23
PPP1R3F-204ENST00000471261 CSGALNACT2Q8N6G5 542 aa13.63□□□□□ -0.23
PPP1R3F-204ENST00000471261 KIAA0895Q8NCT3 520 aa13.63□□□□□ -0.23
PPP1R3F-204ENST00000471261 CCDC47Q96A33 483 aaKnown RBP13.63□□□□□ -0.23
PPP1R3F-204ENST00000471261 CCDC34Q96HJ3 373 aa13.63□□□□□ -0.23
PPP1R3F-204ENST00000471261 MTMR12Q9C0I1 747 aa13.63□□□□□ -0.23
PPP1R3F-204ENST00000471261 CYP4F11Q9HBI6 524 aa13.63□□□□□ -0.23
PPP1R3F-204ENST00000471261 KIAA1586Q9HCI6 787 aa13.63□□□□□ -0.23
PPP1R3F-204ENST00000471261 LIMD1Q9UGP4 676 aa13.63□□□□□ -0.23
PPP1R3F-204ENST00000471261 USTQ9Y2C2 406 aa13.63□□□□□ -0.23
PPP1R3F-204ENST00000471261 PDCD11Q14690 1871 aaKnown RBP13.62□□□□□ -0.23
PPP1R3F-204ENST00000471261 ARHGEF37A1IGU5 675 aa13.62□□□□□ -0.23
PPP1R3F-204ENST00000471261 CYB561D2O14569 222 aa13.62□□□□□ -0.23
PPP1R3F-204ENST00000471261 TBC1D4O60343 1298 aa13.62□□□□□ -0.23
PPP1R3F-204ENST00000471261 OAZ2O95190 189 aa13.62□□□□□ -0.23
PPP1R3F-204ENST00000471261 TNNC2P02585 160 aa13.62□□□□□ -0.23
PPP1R3F-204ENST00000471261 HNRNPA1P09651 372 aaKnown RBP eCLIP13.62□□□□□ -0.23
PPP1R3F-204ENST00000471261 OR4Q2P0C623 313 aa13.62□□□□□ -0.23
PPP1R3F-204ENST00000471261 DLATP10515 647 aaKnown RBP13.62□□□□□ -0.23
PPP1R3F-204ENST00000471261 TYMPP19971 482 aa13.62□□□□□ -0.23
PPP1R3F-204ENST00000471261 ADCY1Q08828 1119 aa13.62□□□□□ -0.23
PPP1R3F-204ENST00000471261 BMT2Q1RMZ1 405 aa13.62□□□□□ -0.23
PPP1R3F-204ENST00000471261 UVSSAQ2YD98 709 aa13.62□□□□□ -0.23
PPP1R3F-204ENST00000471261 SV2CQ496J9 727 aa13.62□□□□□ -0.23
PPP1R3F-204ENST00000471261 PLCD3Q8N3E9 789 aa13.62□□□□□ -0.23
PPP1R3F-204ENST00000471261 C1orf127Q8N9H9 656 aa13.62□□□□□ -0.23
PPP1R3F-204ENST00000471261 XXYLT1Q8NBI6 393 aa13.62□□□□□ -0.23
PPP1R3F-204ENST00000471261 ANKRD36BP1Q96IX9 119 aa13.62□□□□□ -0.23
PPP1R3F-204ENST00000471261 ZNF560Q96MR9 790 aa13.62□□□□□ -0.23
PPP1R3F-204ENST00000471261 PGLYRP2Q96PD5 576 aa13.62□□□□□ -0.23
PPP1R3F-204ENST00000471261 ITGA11Q9UKX5 1188 aa13.62□□□□□ -0.23
PPP1R3F-204ENST00000471261 AGAP1Q9UPQ3 857 aa13.62□□□□□ -0.23
PPP1R3F-204ENST00000471261 R3HCC1Q9Y3T6 440 aaKnown RBP13.62□□□□□ -0.23
PPP1R3F-204ENST00000471261 KPNA7A9QM74 516 aa13.61□□□□□ -0.23
PPP1R3F-204ENST00000471261 EXOC3O60645 756 aa13.61□□□□□ -0.23
PPP1R3F-204ENST00000471261 ABLIM3O94929 683 aa13.61□□□□□ -0.23
PPP1R3F-204ENST00000471261 LRG1P02750 347 aa13.61□□□□□ -0.23
PPP1R3F-204ENST00000471261 ASGR2P07307 311 aa13.61□□□□□ -0.23
PPP1R3F-204ENST00000471261 ATF2P15336 505 aa13.61□□□□□ -0.23
PPP1R3F-204ENST00000471261 PAX3P23760 479 aa13.61□□□□□ -0.23
PPP1R3F-204ENST00000471261 FSHRP23945 695 aa13.61□□□□□ -0.23
PPP1R3F-204ENST00000471261 HOXA9P31269 272 aa13.61□□□□□ -0.23
PPP1R3F-204ENST00000471261 PNPLA4P41247 253 aa13.61□□□□□ -0.23
PPP1R3F-204ENST00000471261 SNRPFP62306 86 aaKnown RBP13.61□□□□□ -0.23
PPP1R3F-204ENST00000471261 NTHL1P78549 312 aa13.61□□□□□ -0.23
PPP1R3F-204ENST00000471261 DPYDQ12882 1025 aa13.61□□□□□ -0.23
PPP1R3F-204ENST00000471261 BFSP1Q12934 665 aa13.61□□□□□ -0.23
PPP1R3F-204ENST00000471261 SURF1Q15526 300 aa13.61□□□□□ -0.23
PPP1R3F-204ENST00000471261 PTPN21Q16825 1174 aa13.61□□□□□ -0.23
PPP1R3F-204ENST00000471261 TPGS2Q68CL5 300 aa13.61□□□□□ -0.23
PPP1R3F-204ENST00000471261 RNF19BQ6ZMZ0 732 aa13.61□□□□□ -0.23
PPP1R3F-204ENST00000471261 METTL23Q86XA0 190 aa13.61□□□□□ -0.23
PPP1R3F-204ENST00000471261 ZDHHC14Q8IZN3 488 aa13.61□□□□□ -0.23
PPP1R3F-204ENST00000471261 GOLGA5Q8TBA6 731 aa13.61□□□□□ -0.23
PPP1R3F-204ENST00000471261 CCDC127Q96BQ5 260 aa13.61□□□□□ -0.23
PPP1R3F-204ENST00000471261 FNBP1Q96RU3 617 aa13.61□□□□□ -0.23
PPP1R3F-204ENST00000471261 OXCT2Q9BYC2 517 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms