RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 CALCAP01258 141 aa14.56□□□□□ -0.08
NPHP4-207ENST00000470763 TROVE2P10155 538 aaKnown RBP eCLIP14.56□□□□□ -0.08
NPHP4-207ENST00000470763 GJC1P36383 396 aa14.56□□□□□ -0.08
NPHP4-207ENST00000470763 CAV1Q03135 178 aa14.56□□□□□ -0.08
NPHP4-207ENST00000470763 P3H1Q32P28 736 aa14.56□□□□□ -0.08
NPHP4-207ENST00000470763 GSTA5Q7RTV2 222 aa14.56□□□□□ -0.08
NPHP4-207ENST00000470763 MORC4Q8TE76 937 aa14.56□□□□□ -0.08
NPHP4-207ENST00000470763 GRK7Q8WTQ7 553 aa14.56□□□□□ -0.08
NPHP4-207ENST00000470763 PTCD3Q96EY7 689 aaKnown RBP14.56□□□□□ -0.08
NPHP4-207ENST00000470763 CYTH2Q99418 400 aa14.56□□□□□ -0.08
NPHP4-207ENST00000470763 PLVAPQ9BX97 442 aa14.56□□□□□ -0.08
NPHP4-207ENST00000470763 OLFML3Q9NRN5 406 aa14.56□□□□□ -0.08
NPHP4-207ENST00000470763 TAS2R1Q9NYW7 299 aa14.56□□□□□ -0.08
NPHP4-207ENST00000470763 ANAPC7Q9UJX3 599 aa14.56□□□□□ -0.08
NPHP4-207ENST00000470763 GOLGA8RI6L899 631 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 EML1O00423 815 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 KRT4P19013 534 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 TM4SF1P30408 202 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 PPP4CP60510 307 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 ARHGAP4P98171 946 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 C2CD6Q53TS8 623 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 KLHL23Q8NBE8 558 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 CYP2W1Q8TAV3 490 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 WDR66Q8TBY9 1149 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 KLF6Q99612 283 aaPredicted RBP14.55□□□□□ -0.08
NPHP4-207ENST00000470763 PREBQ9HCU5 417 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 ARMCX1Q9P291 453 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 ANKFY1Q9P2R3 1169 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 NARFQ9UHQ1 456 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.55□□□□□ -0.08
NPHP4-207ENST00000470763 TAL1P17542 331 aaPredicted RBP14.55□□□□□ -0.08
NPHP4-207ENST00000470763 GSTO1P78417 241 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 PICALMQ13492 652 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 TBC1D9BQ66K14 1250 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 LLGL2Q6P1M3 1020 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 NSL1Q96IY1 281 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 FAM161BQ96MY7 647 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 MKNK1Q9BUB5 465 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 SMG5Q9UPR3 1016 aaKnown RBP14.55□□□□□ -0.08
NPHP4-207ENST00000470763 PCDHA1Q9Y5I3 950 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 FAM86B1E9PN63 330 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 CHMP2AO43633 222 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 MTA2O94776 668 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 ZWINTO95229 277 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 FAM86B2P0C5J1 330 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 RALAP11233 206 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 CCNFP41002 786 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 PSMC4P43686 418 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 SNAP25P60880 206 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 PPP3CAQ08209 521 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 NR1H3Q13133 447 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 PPM1KQ8N3J5 372 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 GLIS1Q8NBF1 620 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 CFAP57Q96MR6 1250 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 ASCC2Q9H1I8 757 aaPredicted RBP14.55□□□□□ -0.08
NPHP4-207ENST00000470763 NOCTQ9UK39 431 aaKnown RBP14.55□□□□□ -0.08
NPHP4-207ENST00000470763 ZNF652Q9Y2D9 606 aa14.55□□□□□ -0.08
NPHP4-207ENST00000470763 CDK5RAP2Q96SN8 1893 aa14.54□□□□□ -0.08
NPHP4-207ENST00000470763 BANF1O75531 89 aa14.54□□□□□ -0.08
NPHP4-207ENST00000470763 USP1O94782 785 aa14.54□□□□□ -0.08
NPHP4-207ENST00000470763 SNHG28P0DPA3 235 aa14.54□□□□□ -0.08
NPHP4-207ENST00000470763 ESRRAP11474 423 aaPredicted RBP14.54□□□□□ -0.08
NPHP4-207ENST00000470763 FMO1Q01740 532 aa14.54□□□□□ -0.08
NPHP4-207ENST00000470763 TCEAL1Q15170 157 aa14.54□□□□□ -0.08
NPHP4-207ENST00000470763 LRRC6Q86X45 466 aa14.54□□□□□ -0.08
NPHP4-207ENST00000470763 TPH2Q8IWU9 490 aa14.54□□□□□ -0.08
NPHP4-207ENST00000470763 FAM178BQ8IXR5 827 aa14.54□□□□□ -0.08
NPHP4-207ENST00000470763 RIBC1Q8N443 379 aaPredicted RBP14.54□□□□□ -0.08
NPHP4-207ENST00000470763 DTNBP1Q96EV8 351 aa14.54□□□□□ -0.08
NPHP4-207ENST00000470763 TTC1Q99614 292 aa14.54□□□□□ -0.08
NPHP4-207ENST00000470763 EIF2AK1Q9BQI3 630 aaKnown RBP14.54□□□□□ -0.08
NPHP4-207ENST00000470763 ANKRD2Q9GZV1 360 aa14.54□□□□□ -0.08
NPHP4-207ENST00000470763 VCX3BQ9H321 246 aa14.54□□□□□ -0.08
NPHP4-207ENST00000470763 ZWILCHQ9H900 591 aa14.54□□□□□ -0.08
NPHP4-207ENST00000470763 VCX3AQ9NNX9 186 aa14.54□□□□□ -0.08
NPHP4-207ENST00000470763 hCG_2014768A0A024R1R8 64 aa14.54□□□□□ -0.08
NPHP4-207ENST00000470763 POLRMTO00411 1230 aaKnown RBP14.54□□□□□ -0.08
NPHP4-207ENST00000470763 TYROBPO43914 113 aa14.54□□□□□ -0.08
NPHP4-207ENST00000470763 BAG2O95816 211 aa14.54□□□□□ -0.08
NPHP4-207ENST00000470763 CYP1A2P05177 515 aa14.54□□□□□ -0.08
NPHP4-207ENST00000470763 SEPT7Q16181 437 aaKnown RBP14.54□□□□□ -0.08
NPHP4-207ENST00000470763 CFAP157Q5JU67 520 aa14.54□□□□□ -0.08
NPHP4-207ENST00000470763 PARVGQ9HBI0 331 aa14.54□□□□□ -0.08
NPHP4-207ENST00000470763 ZNF212Q9UDV6 495 aa14.54□□□□□ -0.08
NPHP4-207ENST00000470763 EIF3DO15371 548 aaKnown RBP eCLIP14.53□□□□□ -0.08
NPHP4-207ENST00000470763 ZSCAN5DPP0CG00 497 aa14.53□□□□□ -0.08
NPHP4-207ENST00000470763 SLURP2P0DP57 97 aa14.53□□□□□ -0.08
NPHP4-207ENST00000470763 BMP3P12645 472 aa14.53□□□□□ -0.08
NPHP4-207ENST00000470763 MAPK4P31152 587 aa14.53□□□□□ -0.08
NPHP4-207ENST00000470763 PGM1P36871 562 aa14.53□□□□□ -0.08
NPHP4-207ENST00000470763 QRICH1Q2TAL8 776 aa14.53□□□□□ -0.08
NPHP4-207ENST00000470763 LIN52Q52LA3 116 aa14.53□□□□□ -0.08
NPHP4-207ENST00000470763 MDH1BQ5I0G3 518 aa14.53□□□□□ -0.08
NPHP4-207ENST00000470763 SYDE1Q6ZW31 735 aaPredicted RBP14.53□□□□□ -0.08
NPHP4-207ENST00000470763 SESTD1Q86VW0 696 aa14.53□□□□□ -0.08
NPHP4-207ENST00000470763 ZSWIM2Q8NEG5 633 aa14.53□□□□□ -0.08
NPHP4-207ENST00000470763 NAP1L4Q99733 375 aaKnown RBP14.53□□□□□ -0.08
NPHP4-207ENST00000470763 GALNT8Q9NY28 637 aa14.53□□□□□ -0.08
NPHP4-207ENST00000470763 GTF3C4Q9UKN8 822 aa14.53□□□□□ -0.08
NPHP4-207ENST00000470763 NEU2Q9Y3R4 380 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms