RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 RNF43Q68DV7 783 aa7.47□□□□□ -1.21
SF3A3-205ENST00000470585 NCAPH2Q6IBW4 605 aa7.47□□□□□ -1.21
SF3A3-205ENST00000470585 CD300LGQ6UXG3 332 aa7.47□□□□□ -1.21
SF3A3-205ENST00000470585 ALKAL1Q6UXT8 129 aa7.47□□□□□ -1.21
SF3A3-205ENST00000470585 SUSD3Q96L08 255 aa7.47□□□□□ -1.21
SF3A3-205ENST00000470585 TSPAN18Q96SJ8 248 aa7.47□□□□□ -1.21
SF3A3-205ENST00000470585 CCDC94Q9BW85 323 aaPredicted RBP7.47□□□□□ -1.21
SF3A3-205ENST00000470585 ADAM33Q9BZ11 813 aa7.47□□□□□ -1.21
SF3A3-205ENST00000470585 ARRDC1-AS1Q9H2J1 176 aa7.47□□□□□ -1.21
SF3A3-205ENST00000470585 CYP4F11Q9HBI6 524 aa7.47□□□□□ -1.21
SF3A3-205ENST00000470585 TUFT1Q9NNX1 390 aa7.47□□□□□ -1.21
SF3A3-205ENST00000470585 THG1LQ9NWX6 298 aaKnown RBP7.47□□□□□ -1.21
SF3A3-205ENST00000470585 SNTG2Q9NY99 539 aa7.47□□□□□ -1.21
SF3A3-205ENST00000470585 EBF1Q9UH73 591 aa7.47□□□□□ -1.21
SF3A3-205ENST00000470585 NEUROG3Q9Y4Z2 214 aa7.47□□□□□ -1.21
SF3A3-205ENST00000470585 TRIP11Q15643 1979 aa7.47□□□□□ -1.21
SF3A3-205ENST00000470585 SETXQ7Z333 2677 aaKnown RBP7.47□□□□□ -1.21
SF3A3-205ENST00000470585 LAMA1P25391 3075 aa7.47□□□□□ -1.21
SF3A3-205ENST00000470585 CITO14578 2027 aa7.47□□□□□ -1.21
SF3A3-205ENST00000470585 ASCC3Q8N3C0 2202 aaKnown RBP7.47□□□□□ -1.21
SF3A3-205ENST00000470585 SMIM28A0A1B0GU29 152 aa7.46□□□□□ -1.22
SF3A3-205ENST00000470585 OR6C75A6NL08 312 aa7.46□□□□□ -1.22
SF3A3-205ENST00000470585 UPK3BL1B0FP48 263 aa7.46□□□□□ -1.22
SF3A3-205ENST00000470585 UPK3BL2E5RIL1 263 aa7.46□□□□□ -1.22
SF3A3-205ENST00000470585 H0Y626 953 aa7.46□□□□□ -1.22
SF3A3-205ENST00000470585 MOSPD3O75425 235 aa7.46□□□□□ -1.22
SF3A3-205ENST00000470585 OAZ2O95190 189 aa7.46□□□□□ -1.22
SF3A3-205ENST00000470585 TRIM16O95361 564 aa7.46□□□□□ -1.22
SF3A3-205ENST00000470585 PRKCBP05771 671 aa7.46□□□□□ -1.22
SF3A3-205ENST00000470585 HSPA4P34932 840 aa7.46□□□□□ -1.22
SF3A3-205ENST00000470585 GRM5P41594 1212 aa7.46□□□□□ -1.22
SF3A3-205ENST00000470585 CCR2P41597 374 aa7.46□□□□□ -1.22
SF3A3-205ENST00000470585 CLCNKBP51801 687 aa7.46□□□□□ -1.22
SF3A3-205ENST00000470585 EPHB3P54753 998 aa7.46□□□□□ -1.22
SF3A3-205ENST00000470585 CYP4A11Q02928 519 aa7.46□□□□□ -1.22
SF3A3-205ENST00000470585 GRSF1Q12849 480 aaKnown RBP eCLIP7.46□□□□□ -1.22
SF3A3-205ENST00000470585 ORC2Q13416 577 aaPredicted RBP7.46□□□□□ -1.22
SF3A3-205ENST00000470585 CTTNQ14247 550 aaKnown RBP7.46□□□□□ -1.22
SF3A3-205ENST00000470585 ARHGAP15Q53QZ3 475 aa7.46□□□□□ -1.22
SF3A3-205ENST00000470585 LRSAM1Q6UWE0 723 aa7.46□□□□□ -1.22
SF3A3-205ENST00000470585 ITIH5Q86UX2 942 aa7.46□□□□□ -1.22
SF3A3-205ENST00000470585 ST13P5Q8NFI4 369 aaPredicted RBP7.46□□□□□ -1.22
SF3A3-205ENST00000470585 WASF1Q92558 559 aa7.46□□□□□ -1.22
SF3A3-205ENST00000470585 RABGGTAQ92696 567 aa7.46□□□□□ -1.22
SF3A3-205ENST00000470585 KIFAP3Q92845 792 aa7.46□□□□□ -1.22
SF3A3-205ENST00000470585 GATA6Q92908 595 aa7.46□□□□□ -1.22
SF3A3-205ENST00000470585 TCEAL4Q96EI5 215 aa7.46□□□□□ -1.22
SF3A3-205ENST00000470585 JAKMIP1Q96N16 626 aaKnown RBP7.46□□□□□ -1.22
SF3A3-205ENST00000470585 NACC1Q96RE7 527 aa7.46□□□□□ -1.22
SF3A3-205ENST00000470585 TMEM209Q96SK2 561 aa7.46□□□□□ -1.22
SF3A3-205ENST00000470585 BRMS1Q9HCU9 246 aa7.46□□□□□ -1.22
SF3A3-205ENST00000470585 CEP72Q9P209 647 aa7.46□□□□□ -1.22
SF3A3-205ENST00000470585 CNTN3Q9P232 1028 aa7.46□□□□□ -1.22
SF3A3-205ENST00000470585 KCNG1Q9UIX4 513 aa7.46□□□□□ -1.22
SF3A3-205ENST00000470585 FBXL5Q9UKA1 691 aa7.46□□□□□ -1.22
SF3A3-205ENST00000470585 TNFSF13BQ9Y275 285 aa7.46□□□□□ -1.22
SF3A3-205ENST00000470585 KIF26AQ9ULI4 1882 aaPredicted RBP7.46□□□□□ -1.22
SF3A3-205ENST00000470585 GCN1Q92616 2671 aaKnown RBP7.45□□□□□ -1.22
SF3A3-205ENST00000470585 ASH1LQ9NR48 2969 aaKnown RBP7.45□□□□□ -1.22
SF3A3-205ENST00000470585 IGSF10Q6WRI0 2623 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 BCLAF3A2AJT9 711 aaKnown RBP7.45□□□□□ -1.22
SF3A3-205ENST00000470585 FAM221BA6H8Z2 402 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 PODXLO00592 558 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 DPYSL4O14531 572 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 TRDMT1O14717 391 aaKnown RBP7.45□□□□□ -1.22
SF3A3-205ENST00000470585 ZBTB39O15060 712 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 AXIN1O15169 862 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 USO1O60763 962 aaKnown RBP7.45□□□□□ -1.22
SF3A3-205ENST00000470585 CDC45O75419 566 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 SEC24AO95486 1093 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 CCDC192P0DO97 292 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 CYP11B2P19099 503 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 DRD1P21728 446 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 HOXD12P35452 270 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 VIPR2P41587 438 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 MCM2P49736 904 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 NOVA1P51513 510 aaKnown RBP7.45□□□□□ -1.22
SF3A3-205ENST00000470585 ZNF252P-AS1Q0IIN9 211 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 TWF1Q12792 350 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 SMARCB1Q12824 385 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 HNRNPDQ14103 355 aaKnown RBP7.45□□□□□ -1.22
SF3A3-205ENST00000470585 MYBPC2Q14324 1141 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 SF3A2Q15428 464 aaKnown RBP7.45□□□□□ -1.22
SF3A3-205ENST00000470585 TMEM132AQ24JP5 1023 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 ITPRIPL2Q3MIP1 535 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 PLK5Q496M5 336 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 CTXN3Q4LDR2 81 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 TMEM196Q5HYL7 178 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 ATF7IP2Q5U623 682 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 PSAPL1Q6NUJ1 521 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 Q6ZS52 159 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 TMC8Q8IU68 726 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 KIAA1958Q8N8K9 716 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 C3orf58Q8NDZ4 430 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 DEPTORQ8TB45 409 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 SHKBP1Q8TBC3 707 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 PSMG2Q969U7 264 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 ACDQ96AP0 544 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 IFT74Q96LB3 600 aa7.45□□□□□ -1.22
SF3A3-205ENST00000470585 ZSWIM3Q96MP5 696 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms