RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 VNN2O95498 520 aa14.43□□□□□ -0.1
CPSF4-210ENST00000469897 BMP15O95972 392 aa14.43□□□□□ -0.1
CPSF4-210ENST00000469897 PIGRP01833 764 aa14.43□□□□□ -0.1
CPSF4-210ENST00000469897 ADRB2P07550 413 aa14.43□□□□□ -0.1
CPSF4-210ENST00000469897 FCARP24071 287 aa14.43□□□□□ -0.1
CPSF4-210ENST00000469897 ACOT2P49753 483 aa14.43□□□□□ -0.1
CPSF4-210ENST00000469897 GTF2BQ00403 316 aa14.43□□□□□ -0.1
CPSF4-210ENST00000469897 DUSP4Q13115 394 aa14.43□□□□□ -0.1
CPSF4-210ENST00000469897 SPATA1Q5VX52 437 aa14.43□□□□□ -0.1
CPSF4-210ENST00000469897 JADE1Q6IE81 842 aa14.43□□□□□ -0.1
CPSF4-210ENST00000469897 TPRG1Q6ZUI0 275 aa14.43□□□□□ -0.1
CPSF4-210ENST00000469897 USP37Q86T82 979 aa14.43□□□□□ -0.1
CPSF4-210ENST00000469897 FIZ1Q96SL8 496 aa14.43□□□□□ -0.1
CPSF4-210ENST00000469897 ZFP14Q9HCL3 533 aa14.43□□□□□ -0.1
CPSF4-210ENST00000469897 SPATA6Q9NWH7 488 aaPredicted RBP14.43□□□□□ -0.1
CPSF4-210ENST00000469897 CPSF3Q9UKF6 684 aaKnown RBP14.43□□□□□ -0.1
CPSF4-210ENST00000469897 CLIC4Q9Y696 253 aa14.43□□□□□ -0.1
CPSF4-210ENST00000469897 VPS37CA5D8V6 355 aaPredicted RBP14.42□□□□□ -0.1
CPSF4-210ENST00000469897 TISP43B9A030 160 aa14.42□□□□□ -0.1
CPSF4-210ENST00000469897 SPTLC1O15269 473 aa14.42□□□□□ -0.1
CPSF4-210ENST00000469897 XPOTO43592 962 aaKnown RBP14.42□□□□□ -0.1
CPSF4-210ENST00000469897 TBCAO75347 108 aaKnown RBP14.42□□□□□ -0.1
CPSF4-210ENST00000469897 LMNAP02545 664 aaKnown RBP14.42□□□□□ -0.1
CPSF4-210ENST00000469897 SCP2P22307 547 aa14.42□□□□□ -0.1
CPSF4-210ENST00000469897 VIPR2P41587 438 aa14.42□□□□□ -0.1
CPSF4-210ENST00000469897 AARSP49588 968 aaKnown RBP eCLIP14.42□□□□□ -0.16e-7■■■■□ 19.6
CPSF4-210ENST00000469897 CDR1P51861 262 aa14.42□□□□□ -0.1
CPSF4-210ENST00000469897 LILRA4P59901 499 aa14.42□□□□□ -0.1
CPSF4-210ENST00000469897 ADALQ6DHV7 355 aa14.42□□□□□ -0.1
CPSF4-210ENST00000469897 ZNF852Q6ZMS4 543 aa14.42□□□□□ -0.1
CPSF4-210ENST00000469897 DYMQ7RTS9 669 aa14.42□□□□□ -0.1
CPSF4-210ENST00000469897 CD302Q8IX05 232 aa14.42□□□□□ -0.1
CPSF4-210ENST00000469897 BEST2Q8NFU1 509 aa14.42□□□□□ -0.1
CPSF4-210ENST00000469897 LARP4BQ92615 738 aaKnown RBP14.42□□□□□ -0.1
CPSF4-210ENST00000469897 SENP8Q96LD8 212 aa14.42□□□□□ -0.1
CPSF4-210ENST00000469897 ASB16Q96NS5 453 aa14.42□□□□□ -0.1
CPSF4-210ENST00000469897 TSPAN18Q96SJ8 248 aa14.42□□□□□ -0.1
CPSF4-210ENST00000469897 TMEM209Q96SK2 561 aa14.42□□□□□ -0.1
CPSF4-210ENST00000469897 NELL2Q99435 816 aa14.42□□□□□ -0.1
CPSF4-210ENST00000469897 TRMT61BQ9BVS5 477 aaKnown RBP14.42□□□□□ -0.1
CPSF4-210ENST00000469897 OXCT2Q9BYC2 517 aaPredicted RBP14.42□□□□□ -0.1
CPSF4-210ENST00000469897 OSBPL6Q9BZF3 934 aa14.42□□□□□ -0.1
CPSF4-210ENST00000469897 CCSER1Q9C0I3 900 aa14.42□□□□□ -0.1
CPSF4-210ENST00000469897 IKZF4Q9H2S9 585 aa14.42□□□□□ -0.1
CPSF4-210ENST00000469897 CRISPLD1Q9H336 500 aa14.42□□□□□ -0.1
CPSF4-210ENST00000469897 SEMA4AQ9H3S1 761 aa14.42□□□□□ -0.1
CPSF4-210ENST00000469897 BRD9Q9H8M2 597 aa14.42□□□□□ -0.1
CPSF4-210ENST00000469897 LTB4R2Q9NPC1 389 aa14.42□□□□□ -0.1
CPSF4-210ENST00000469897 DMDP11532 3685 aa14.41□□□□□ -0.1
CPSF4-210ENST00000469897 MYO15AQ9UKN7 3530 aa14.41□□□□□ -0.1
CPSF4-210ENST00000469897 OR6C75A6NL08 312 aa14.41□□□□□ -0.1
CPSF4-210ENST00000469897 SHISA7A6NL88 538 aa14.41□□□□□ -0.1
CPSF4-210ENST00000469897 TULP1O00294 542 aaPredicted RBP14.41□□□□□ -0.1
CPSF4-210ENST00000469897 LAMTOR5O43504 91 aa14.41□□□□□ -0.1
CPSF4-210ENST00000469897 CEBPZQ03701 1054 aaKnown RBP14.41□□□□□ -0.1
CPSF4-210ENST00000469897 CSTF1Q05048 431 aaKnown RBP14.41□□□□□ -0.1
CPSF4-210ENST00000469897 GPR17Q13304 367 aa14.41□□□□□ -0.1
CPSF4-210ENST00000469897 CUL4AQ13619 759 aa14.41□□□□□ -0.1
CPSF4-210ENST00000469897 PTPAQ15257 358 aa14.41□□□□□ -0.1
CPSF4-210ENST00000469897 TEAD2Q15562 447 aa14.41□□□□□ -0.1
CPSF4-210ENST00000469897 C9orf57Q5W0N0 161 aa14.41□□□□□ -0.1
CPSF4-210ENST00000469897 OVOS1Q6IE37 1185 aa14.41□□□□□ -0.1
CPSF4-210ENST00000469897 CENPPQ6IPU0 288 aa14.41□□□□□ -0.1
CPSF4-210ENST00000469897 FAM173BQ6P4H8 233 aa14.41□□□□□ -0.1
CPSF4-210ENST00000469897 ZNF720Q7Z2F6 126 aa14.41□□□□□ -0.1
CPSF4-210ENST00000469897 GPIHBP1Q8IV16 184 aa14.41□□□□□ -0.1
CPSF4-210ENST00000469897 MAP4K3Q8IVH8 894 aa14.41□□□□□ -0.1
CPSF4-210ENST00000469897 KRI1Q8N9T8 703 aaKnown RBP14.41□□□□□ -0.1
CPSF4-210ENST00000469897 ATAD1Q8NBU5 361 aa14.41□□□□□ -0.1
CPSF4-210ENST00000469897 SMARCD2Q92925 531 aa14.41□□□□□ -0.1
CPSF4-210ENST00000469897 CLIC6Q96NY7 704 aa14.41□□□□□ -0.1
CPSF4-210ENST00000469897 ASAH2Q9NR71 780 aa14.41□□□□□ -0.1
CPSF4-210ENST00000469897 PIRO00625 290 aa14.4□□□□□ -0.1
CPSF4-210ENST00000469897 SOAT2O75908 522 aa14.4□□□□□ -0.1
CPSF4-210ENST00000469897 NFICP08651 508 aa14.4□□□□□ -0.1
CPSF4-210ENST00000469897 TYMPP19971 482 aa14.4□□□□□ -0.1
CPSF4-210ENST00000469897 TARSP26639 723 aaKnown RBP14.4□□□□□ -0.1
CPSF4-210ENST00000469897 GDI1P31150 447 aa14.4□□□□□ -0.1
CPSF4-210ENST00000469897 ALDH1A3P47895 512 aa14.4□□□□□ -0.1
CPSF4-210ENST00000469897 EPHB3P54753 998 aa14.4□□□□□ -0.1
CPSF4-210ENST00000469897 EPHA5P54756 1037 aa14.4□□□□□ -0.1
CPSF4-210ENST00000469897 FZD5Q13467 585 aa14.4□□□□□ -0.1
CPSF4-210ENST00000469897 SLFN12LQ6IEE8 588 aa14.4□□□□□ -0.1
CPSF4-210ENST00000469897 ARMCX5Q6P1M9 558 aa14.4□□□□□ -0.1
CPSF4-210ENST00000469897 VITQ6UXI7 678 aa14.4□□□□□ -0.1
CPSF4-210ENST00000469897 LEMD2Q8NC56 503 aa14.4□□□□□ -0.1
CPSF4-210ENST00000469897 SHKBP1Q8TBC3 707 aa14.4□□□□□ -0.1
CPSF4-210ENST00000469897 ZSCAN18Q8TBC5 510 aaPredicted RBP14.4□□□□□ -0.1
CPSF4-210ENST00000469897 CLDN23Q96B33 292 aa14.4□□□□□ -0.1
CPSF4-210ENST00000469897 LRRC3Q9BY71 257 aa14.4□□□□□ -0.1
CPSF4-210ENST00000469897 PANK2Q9BZ23 570 aa14.4□□□□□ -0.1
CPSF4-210ENST00000469897 CCDC39Q9UFE4 941 aa14.4□□□□□ -0.1
CPSF4-210ENST00000469897 AGO2Q9UKV8 859 aaKnown RBP14.4□□□□□ -0.1
CPSF4-210ENST00000469897 YIPF1Q9Y548 306 aa14.4□□□□□ -0.1
CPSF4-210ENST00000469897 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.4□□□□□ -0.1
CPSF4-210ENST00000469897 A0A1W2PRU2 124 aa14.39□□□□□ -0.11
CPSF4-210ENST00000469897 ANO9A1A5B4 782 aa14.39□□□□□ -0.11
CPSF4-210ENST00000469897 NCAM2O15394 837 aa14.39□□□□□ -0.11
CPSF4-210ENST00000469897 ODC1P11926 461 aa14.39□□□□□ -0.11
CPSF4-210ENST00000469897 PSMC3P17980 439 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms