RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 EPHB4P54760 987 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 EMC2Q15006 297 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 KRT71Q3SY84 523 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 BRDTQ58F21 947 aaPredicted RBP13.07□□□□□ -0.32
USP11-206ENST00000469080 DCUN1D2Q6PH85 259 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 PRUNE1Q86TP1 453 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 GBP7Q8N8V2 638 aaPredicted RBP13.07□□□□□ -0.32
USP11-206ENST00000469080 FBF1Q8TES7 1133 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 SPATA33Q96N06 139 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 NUP85Q9BW27 656 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 RBAKQ9NYW8 714 aaPredicted RBP13.07□□□□□ -0.32
USP11-206ENST00000469080 COX16Q9P0S2 106 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 RABL2BQ9UNT1 228 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 ZNF711Q9Y462 761 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 IVNS1ABPQ9Y6Y0 642 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 SSU72P8A0A1W2PR75 194 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 F5H423 210 aaPredicted RBP13.07□□□□□ -0.32
USP11-206ENST00000469080 PGRMC1O00264 195 aaKnown RBP13.07□□□□□ -0.32
USP11-206ENST00000469080 CLDN3O15551 220 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 SP100P23497 879 aaPredicted RBP13.07□□□□□ -0.32
USP11-206ENST00000469080 ALDH5A1P51649 535 aaPredicted RBP13.07□□□□□ -0.32
USP11-206ENST00000469080 PAK2Q13177 524 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 PAPD7Q5XG87 772 aaKnown RBP13.07□□□□□ -0.32
USP11-206ENST00000469080 DPY19L2Q6NUT2 758 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 MOXD1Q6UVY6 613 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 CCDC197Q8NCU1 140 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 CCT6BQ92526 530 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 CYP39A1Q9NYL5 469 aa13.07□□□□□ -0.32
USP11-206ENST00000469080 TTC7AQ9ULT0 858 aaPredicted RBP13.07□□□□□ -0.32
USP11-206ENST00000469080 GOLGA6L10A0A0M3HER8 536 aa13.06□□□□□ -0.32
USP11-206ENST00000469080 GSTT1P30711 240 aa13.06□□□□□ -0.32
USP11-206ENST00000469080 TMED1Q13445 227 aa13.06□□□□□ -0.32
USP11-206ENST00000469080 LACTB2Q53H82 288 aaPredicted RBP13.06□□□□□ -0.32
USP11-206ENST00000469080 PCNX4Q63HM2 1172 aa13.06□□□□□ -0.32
USP11-206ENST00000469080 DPP9Q86TI2 863 aa13.06□□□□□ -0.32
USP11-206ENST00000469080 RNF169Q8NCN4 708 aa13.06□□□□□ -0.32
USP11-206ENST00000469080 SLC10A4Q96EP9 437 aa13.06□□□□□ -0.32
USP11-206ENST00000469080 CYP26B1Q9NR63 512 aa13.06□□□□□ -0.32
USP11-206ENST00000469080 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.06□□□□□ -0.32
USP11-206ENST00000469080 SPDYE16A6NNV3 312 aaPredicted RBP13.06□□□□□ -0.32
USP11-206ENST00000469080 KRT38O76015 456 aa13.06□□□□□ -0.32
USP11-206ENST00000469080 TXNP10599 105 aaKnown RBP13.06□□□□□ -0.32
USP11-206ENST00000469080 MAPK4P31152 587 aa13.06□□□□□ -0.32
USP11-206ENST00000469080 NUMBP49757 651 aa13.06□□□□□ -0.32
USP11-206ENST00000469080 TGFB2P61812 414 aa13.06□□□□□ -0.32
USP11-206ENST00000469080 SEL1L2Q5TEA6 688 aa13.06□□□□□ -0.32
USP11-206ENST00000469080 C14orf80Q86SX3 495 aa13.06□□□□□ -0.32
USP11-206ENST00000469080 CCDC33Q8N5R6 958 aa13.06□□□□□ -0.32
USP11-206ENST00000469080 PLEKHO2Q8TD55 490 aa13.06□□□□□ -0.32
USP11-206ENST00000469080 UPF1Q92900 1129 aaKnown RBP eCLIP13.06□□□□□ -0.32
USP11-206ENST00000469080 ATP6V1G3Q96LB4 118 aa13.06□□□□□ -0.32
USP11-206ENST00000469080 OLFML3Q9NRN5 406 aa13.06□□□□□ -0.32
USP11-206ENST00000469080 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.06□□□□□ -0.32
USP11-206ENST00000469080 GPRC5DQ9NZD1 345 aa13.06□□□□□ -0.32
USP11-206ENST00000469080 TBK1Q9UHD2 729 aa13.06□□□□□ -0.32
USP11-206ENST00000469080 ALG6Q9Y672 507 aa13.06□□□□□ -0.32
USP11-206ENST00000469080 MRPL42Q9Y6G3 142 aaKnown RBP13.06□□□□□ -0.32
USP11-206ENST00000469080 PIK3CDO00329 1044 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 LMNB1P20700 586 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 KCNA4P22459 653 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 DSG3P32926 999 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 MFAP3P55082 362 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 MAPK7Q13164 816 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 RIPK1Q13546 671 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 HSDL1Q3SXM5 330 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 HYIQ5T013 277 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 OLFML2BQ68BL8 750 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 TTC16Q8NEE8 873 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 TPCN2Q8NHX9 752 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 NR1H4Q96RI1 486 aaPredicted RBP13.05□□□□□ -0.32
USP11-206ENST00000469080 IWS1Q96ST2 819 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 STK33Q9BYT3 514 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 UTP6Q9NYH9 597 aaKnown RBP13.05□□□□□ -0.32
USP11-206ENST00000469080 BTBD7Q9P203 1132 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 TUBGCP4Q9UGJ1 667 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 WDR37Q9Y2I8 494 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 FRMPD4Q14CM0 1322 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 DHX15O43143 795 aaKnown RBP13.05□□□□□ -0.32
USP11-206ENST00000469080 TMEM191BP0C7N4 346 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 POTEJP0CG39 1038 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 TNFSF9P41273 254 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 IFNAR2P48551 515 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 JAK3P52333 1124 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 FKBP1AP62942 108 aaKnown RBP13.05□□□□□ -0.32
USP11-206ENST00000469080 CDO1Q16878 200 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 KRT39Q6A163 491 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 SCARA3Q6AZY7 606 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 VSIG10LQ86VR7 867 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 APOBEC3FQ8IUX4 373 aaKnown RBP13.05□□□□□ -0.32
USP11-206ENST00000469080 FBXL13Q8NEE6 735 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 PRPF31Q8WWY3 499 aaKnown RBP13.05□□□□□ -0.32
USP11-206ENST00000469080 KLHL29Q96CT2 875 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 RAB20Q9NX57 234 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 SCOCQ9UIL1 159 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 UTP11Q9Y3A2 253 aaKnown RBP13.05□□□□□ -0.32
USP11-206ENST00000469080 ADGRA3Q8IWK6 1321 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 ANO9A1A5B4 782 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 GRAP2O75791 330 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 ZFXP17010 805 aaPredicted RBP13.05□□□□□ -0.32
USP11-206ENST00000469080 COMTP21964 271 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms