RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 RBM43Q6ZSC3 357 aaKnown RBP20.72■□□□□ 0.91
USP11-205ENST00000467378 BRSK2Q8IWQ3 736 aa20.72■□□□□ 0.91
USP11-205ENST00000467378 SIX5Q8N196 739 aa20.72■□□□□ 0.91
USP11-205ENST00000467378 SLC39A11Q8N1S5 342 aa20.72■□□□□ 0.91
USP11-205ENST00000467378 XXYLT1Q8NBI6 393 aa20.72■□□□□ 0.91
USP11-205ENST00000467378 ASB7Q9H672 318 aa20.72■□□□□ 0.91
USP11-205ENST00000467378 KIAA1586Q9HCI6 787 aa20.72■□□□□ 0.91
USP11-205ENST00000467378 R4GN57 208 aa20.72■□□□□ 0.91
USP11-205ENST00000467378 NCOR2Q9Y618 2525 aa20.72■□□□□ 0.91
USP11-205ENST00000467378 PPP1R2P41236 205 aa20.71■□□□□ 0.91
USP11-205ENST00000467378 WNT7BP56706 349 aa20.71■□□□□ 0.91
USP11-205ENST00000467378 SOX4Q06945 474 aaPredicted RBP20.71■□□□□ 0.91
USP11-205ENST00000467378 SPAG1Q07617 926 aa20.71■□□□□ 0.91
USP11-205ENST00000467378 TDGQ13569 410 aa20.71■□□□□ 0.91
USP11-205ENST00000467378 MYBPC2Q14324 1141 aa20.71■□□□□ 0.91
USP11-205ENST00000467378 BMS1Q14692 1282 aaKnown RBP20.71■□□□□ 0.91
USP11-205ENST00000467378 CBWD2Q8IUF1 395 aa20.71■□□□□ 0.91
USP11-205ENST00000467378 ACSF2Q96CM8 615 aaPredicted RBP20.71■□□□□ 0.91
USP11-205ENST00000467378 FAM212AQ96EL1 285 aa20.71■□□□□ 0.91
USP11-205ENST00000467378 CNTNAP3BQ96NU0 1288 aa20.71■□□□□ 0.91
USP11-205ENST00000467378 TSPAN18Q96SJ8 248 aa20.71■□□□□ 0.91
USP11-205ENST00000467378 CNTNAP3Q9BZ76 1288 aa20.71■□□□□ 0.91
USP11-205ENST00000467378 DZANK1Q9NVP4 752 aa20.71■□□□□ 0.91
USP11-205ENST00000467378 FAN1Q9Y2M0 1017 aa20.71■□□□□ 0.91
USP11-205ENST00000467378 DMXL1Q9Y485 3027 aa20.71■□□□□ 0.91
USP11-205ENST00000467378 EPG5Q9HCE0 2579 aa20.7■□□□□ 0.9
USP11-205ENST00000467378 CARNS1A5YM72 827 aa20.7■□□□□ 0.9
USP11-205ENST00000467378 ZNF233A6NK53 670 aa20.7■□□□□ 0.9
USP11-205ENST00000467378 CXCL14O95715 111 aa20.7■□□□□ 0.9
USP11-205ENST00000467378 NR3C1P04150 777 aa20.7■□□□□ 0.9
USP11-205ENST00000467378 OR1G1P47890 313 aa20.7■□□□□ 0.9
USP11-205ENST00000467378 JADE1Q6IE81 842 aa20.7■□□□□ 0.9
USP11-205ENST00000467378 TMEM173Q86WV6 379 aaPredicted RBP20.7■□□□□ 0.9
USP11-205ENST00000467378 RDH13Q8NBN7 331 aa20.7■□□□□ 0.9
USP11-205ENST00000467378 NOC3LQ8WTT2 800 aaKnown RBP20.7■□□□□ 0.9
USP11-205ENST00000467378 C18orf25Q96B23 403 aaPredicted RBP20.7■□□□□ 0.9
USP11-205ENST00000467378 DHTKD1Q96HY7 919 aaPredicted RBP20.7■□□□□ 0.9
USP11-205ENST00000467378 PAAF1Q9BRP4 392 aa20.7■□□□□ 0.9
USP11-205ENST00000467378 SLC38A7Q9NVC3 462 aa20.7■□□□□ 0.9
USP11-205ENST00000467378 RBAKQ9NYW8 714 aaPredicted RBP20.7■□□□□ 0.9
USP11-205ENST00000467378 TMEM63CQ9P1W3 806 aa20.7■□□□□ 0.9
USP11-205ENST00000467378 CACNG4Q9UBN1 327 aa20.7■□□□□ 0.9
USP11-205ENST00000467378 DERAQ9Y315 318 aa20.7■□□□□ 0.9
USP11-205ENST00000467378 CEP250Q9BV73 2442 aa20.7■□□□□ 0.9
USP11-205ENST00000467378 CASTOR2A6NHX0 329 aa20.69■□□□□ 0.9
USP11-205ENST00000467378 EXOC3O60645 756 aa20.69■□□□□ 0.9
USP11-205ENST00000467378 IL18RAPO95256 599 aa20.69■□□□□ 0.9
USP11-205ENST00000467378 PTMSP20962 102 aa20.69■□□□□ 0.9
USP11-205ENST00000467378 RFX1P22670 979 aa20.69■□□□□ 0.9
USP11-205ENST00000467378 CCNE1P24864 410 aa20.69■□□□□ 0.9
USP11-205ENST00000467378 PMS1P54277 932 aaKnown RBP20.69■□□□□ 0.9
USP11-205ENST00000467378 STIM1Q13586 685 aa20.69■□□□□ 0.9
USP11-205ENST00000467378 SNRNP35Q16560 246 aaKnown RBP20.69■□□□□ 0.9
USP11-205ENST00000467378 EDRF1Q3B7T1 1238 aa20.69■□□□□ 0.9
USP11-205ENST00000467378 ANKRD40Q6AI12 368 aa20.69■□□□□ 0.9
USP11-205ENST00000467378 BCL7CQ8WUZ0 217 aaPredicted RBP20.69■□□□□ 0.9
USP11-205ENST00000467378 KIF12Q96FN5 646 aa20.69■□□□□ 0.9
USP11-205ENST00000467378 IGSF21Q96ID5 467 aa20.69■□□□□ 0.9
USP11-205ENST00000467378 GOLGA2P5Q9HBQ8 144 aa20.69■□□□□ 0.9
USP11-205ENST00000467378 MARCH5Q9NX47 278 aa20.69■□□□□ 0.9
USP11-205ENST00000467378 DUSP12Q9UNI6 340 aa20.69■□□□□ 0.9
USP11-205ENST00000467378 TPRP12270 2363 aaKnown RBP20.68■□□□□ 0.9
USP11-205ENST00000467378 KMT2BQ9UMN6 2715 aaPredicted RBP20.68■□□□□ 0.9
USP11-205ENST00000467378 PSMA7O14818 248 aa20.68■□□□□ 0.9
USP11-205ENST00000467378 EPCAMP16422 314 aa20.68■□□□□ 0.9
USP11-205ENST00000467378 CYP3A5P20815 502 aa20.68■□□□□ 0.9
USP11-205ENST00000467378 CASP4P49662 377 aa20.68■□□□□ 0.9
USP11-205ENST00000467378 CCDC183Q5T5S1 534 aa20.68■□□□□ 0.9
USP11-205ENST00000467378 TMC5Q6UXY8 1006 aa20.68■□□□□ 0.9
USP11-205ENST00000467378 EFCAB13Q8IY85 973 aa20.68■□□□□ 0.9
USP11-205ENST00000467378 RIN2Q8WYP3 895 aaPredicted RBP20.68■□□□□ 0.9
USP11-205ENST00000467378 RABGGTAQ92696 567 aa20.68■□□□□ 0.9
USP11-205ENST00000467378 UROC1Q96N76 676 aa20.68■□□□□ 0.9
USP11-205ENST00000467378 COLEC11Q9BWP8 271 aa20.68■□□□□ 0.9
USP11-205ENST00000467378 PDE11AQ9HCR9 933 aa20.68■□□□□ 0.9
USP11-205ENST00000467378 TUBGCP4Q9UGJ1 667 aa20.68■□□□□ 0.9
USP11-205ENST00000467378 UBQLN1Q9UMX0 589 aaKnown RBP20.68■□□□□ 0.9
USP11-205ENST00000467378 C2CD2Q9Y426 696 aa20.68■□□□□ 0.9
USP11-205ENST00000467378 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.67■□□□□ 0.9
USP11-205ENST00000467378 TRIM49BA6NDI0 452 aa20.67■□□□□ 0.9
USP11-205ENST00000467378 SPDYE4A6NLX3 237 aa20.67■□□□□ 0.9
USP11-205ENST00000467378 F8W810 466 aa20.67■□□□□ 0.9
USP11-205ENST00000467378 NFICP08651 508 aa20.67■□□□□ 0.9
USP11-205ENST00000467378 NR2F2P24468 414 aa20.67■□□□□ 0.9
USP11-205ENST00000467378 CLCNKBP51801 687 aa20.67■□□□□ 0.9
USP11-205ENST00000467378 NLRP12P59046 1061 aa20.67■□□□□ 0.9
USP11-205ENST00000467378 CYP24A1Q07973 514 aa20.67■□□□□ 0.9
USP11-205ENST00000467378 ADAM9Q13443 819 aa20.67■□□□□ 0.9
USP11-205ENST00000467378 HSP90AA2PQ14568 343 aaPredicted RBP20.67■□□□□ 0.9
USP11-205ENST00000467378 UPP1Q16831 310 aa20.67■□□□□ 0.9
USP11-205ENST00000467378 SPATA1Q5VX52 437 aa20.67■□□□□ 0.9
USP11-205ENST00000467378 CCDC149Q6ZUS6 474 aa20.67■□□□□ 0.9
USP11-205ENST00000467378 OTOP3Q7RTS5 596 aa20.67■□□□□ 0.9
USP11-205ENST00000467378 NT5DC4Q86YG4 428 aa20.67■□□□□ 0.9
USP11-205ENST00000467378 TMEM130Q8N3G9 435 aa20.67■□□□□ 0.9
USP11-205ENST00000467378 AUTS2Q8WXX7 1259 aa20.67■□□□□ 0.9
USP11-205ENST00000467378 PRG3Q9Y2Y8 225 aaPredicted RBP20.67■□□□□ 0.9
USP11-205ENST00000467378 XPOTO43592 962 aaKnown RBP20.66■□□□□ 0.9
USP11-205ENST00000467378 EFEMP2O95967 443 aa20.66■□□□□ 0.9
USP11-205ENST00000467378 IGFBP6P24592 240 aaPredicted RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms