RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 FLT3LGP49771 235 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 SNRPFP62306 86 aaKnown RBP6.04□□□□□ -1.44
VPS41-211ENST00000466017 TNFAIP2Q03169 654 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 POU5F1BQ06416 359 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 STK4Q13043 487 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 STIM1Q13586 685 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 ALCAMQ13740 583 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 MYBPC2Q14324 1141 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 NFIL3Q16649 462 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 BMT2Q1RMZ1 405 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 DPCR1Q3MIW9 517 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 CCDC144BQ3MJ40 725 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 HSDL1Q3SXM5 330 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 ZNF484Q5JVG2 852 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 SPATA1Q5VX52 437 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 MFSD14CQ5VZR4 134 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 SARM1Q6SZW1 724 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 ANO5Q75V66 913 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 EPM2AIP1Q7L775 607 aaPredicted RBP6.04□□□□□ -1.44
VPS41-211ENST00000466017 EEPD1Q7L9B9 569 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 GPBP1Q86WP2 473 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 RELL1Q8IUW5 271 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 HID1Q8IV36 788 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 DHX40Q8IX18 779 aaKnown RBP6.04□□□□□ -1.44
VPS41-211ENST00000466017 FBXO16Q8IX29 292 aaPredicted RBP6.04□□□□□ -1.44
VPS41-211ENST00000466017 SPACA3Q8IXA5 215 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 GRAMD1CQ8IYS0 662 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 MCPH1Q8NEM0 835 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 NETO1Q8TDF5 533 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 PIGOQ8TEQ8 1089 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 ATP8B4Q8TF62 1192 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 NOC3LQ8WTT2 800 aaKnown RBP6.04□□□□□ -1.44
VPS41-211ENST00000466017 STAMQ92783 540 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 ERCC4Q92889 916 aaPredicted RBP6.04□□□□□ -1.44
VPS41-211ENST00000466017 HVCN1Q96D96 273 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 SPATA33Q96N06 139 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 JPH2Q9BR39 696 aaPredicted RBP6.04□□□□□ -1.44
VPS41-211ENST00000466017 TNKS2Q9H2K2 1166 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 DHX33Q9H6R0 707 aaKnown RBP6.04□□□□□ -1.44
VPS41-211ENST00000466017 AZI2Q9H6S1 392 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 PRDM7Q9NQW5 492 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 CYP26B1Q9NR63 512 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 PDGFCQ9NRA1 345 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 EXOC1Q9NV70 894 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 ERAP1Q9NZ08 941 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 FLRT1Q9NZU1 646 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 LARSQ9P2J5 1176 aaKnown RBP6.04□□□□□ -1.44
VPS41-211ENST00000466017 CGNQ9P2M7 1197 aaKnown RBP6.04□□□□□ -1.44
VPS41-211ENST00000466017 RWDD2AQ9UIY3 292 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 LRRC37A2A6NM11 1700 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 COL1A2P08123 1366 aa6.04□□□□□ -1.44
VPS41-211ENST00000466017 MYH9P35579 1960 aaKnown RBP6.04□□□□□ -1.44
VPS41-211ENST00000466017 UBE4BO95155 1302 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 BICDL2A1A5D9 508 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 RRN3P2A6NIE6 340 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 BECN2A8MW95 431 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 H0YCG3 227 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 GOLGA6L19H0YKK7 550 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 HAS3O00219 553 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 BIN1O00499 593 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 NOP56O00567 594 aaKnown RBP6.03□□□□□ -1.44
VPS41-211ENST00000466017 PSMA7O14818 248 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 MAGEB2O15479 319 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 SEPT4O43236 478 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 GREM1O60565 184 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 MAFO75444 373 aaPredicted RBP6.03□□□□□ -1.44
VPS41-211ENST00000466017 CEACAM5P06731 702 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 CYBAP13498 195 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 AKR1A1P14550 325 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 CAPN2P17655 700 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 CASP1P29466 404 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 ARL2P36404 184 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 GJA9P57773 515 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 C1QTNF8P60827 252 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 TPM4P67936 248 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 GTF2BQ00403 316 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 MYL5Q02045 173 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 COASYQ13057 564 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 MAPK7Q13164 816 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 UGCGQ16739 394 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 DGKDQ16760 1214 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 BRDTQ58F21 947 aaPredicted RBP6.03□□□□□ -1.44
VPS41-211ENST00000466017 XKR9Q5GH70 373 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 HERC4Q5GLZ8 1057 aaPredicted RBP6.03□□□□□ -1.44
VPS41-211ENST00000466017 FAM26FQ5R3K3 315 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 MAP3K21Q5TCX8 1036 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 C11orf57Q6ZUT1 292 aaPredicted RBP6.03□□□□□ -1.44
VPS41-211ENST00000466017 STXBP4Q6ZWJ1 553 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 ZNF720Q7Z2F6 126 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 ZC3H3Q8IXZ2 948 aaKnown RBP6.03□□□□□ -1.44
VPS41-211ENST00000466017 KIAA0895Q8NCT3 520 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 FLCNQ8NFG4 579 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 KIFAP3Q92845 792 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 CEP170P1Q96L14 293 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 DRC1Q96MC2 740 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 UIMC1Q96RL1 719 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 FIZ1Q96SL8 496 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 REEP2Q9BRK0 252 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 C16orf70Q9BSU1 422 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 UPF3AQ9H1J1 476 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 241.2 ms