RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 JADE1Q6IE81 842 aa22.84■■□□□ 1.25
VSX1-206ENST00000444511 USP49Q70CQ1 688 aa22.84■■□□□ 1.25
VSX1-206ENST00000444511 PDCD11Q14690 1871 aaKnown RBP22.83■■□□□ 1.25
VSX1-206ENST00000444511 MYH15Q9Y2K3 1946 aa22.83■■□□□ 1.25
VSX1-206ENST00000444511 NOTCH4Q99466 2003 aa22.83■■□□□ 1.25
VSX1-206ENST00000444511 OR6C75A6NL08 312 aa22.83■■□□□ 1.25
VSX1-206ENST00000444511 MICAL2O94851 1124 aa22.83■■□□□ 1.25
VSX1-206ENST00000444511 TXLNAP40222 546 aa22.83■■□□□ 1.25
VSX1-206ENST00000444511 ADALQ6DHV7 355 aa22.83■■□□□ 1.25
VSX1-206ENST00000444511 TANGO2Q6ICL3 276 aa22.83■■□□□ 1.25
VSX1-206ENST00000444511 DYMQ7RTS9 669 aa22.83■■□□□ 1.25
VSX1-206ENST00000444511 LEMD2Q8NC56 503 aa22.83■■□□□ 1.25
VSX1-206ENST00000444511 ELSPBP1Q96BH3 223 aa22.83■■□□□ 1.25
VSX1-206ENST00000444511 PGLYRP2Q96PD5 576 aa22.83■■□□□ 1.25
VSX1-206ENST00000444511 PLA2G2FQ9BZM2 168 aa22.83■■□□□ 1.25
VSX1-206ENST00000444511 ASAH2Q9NR71 780 aa22.83■■□□□ 1.25
VSX1-206ENST00000444511 CEP72Q9P209 647 aa22.83■■□□□ 1.25
VSX1-206ENST00000444511 STK17AQ9UEE5 414 aa22.83■■□□□ 1.25
VSX1-206ENST00000444511 FBXO2Q9UK22 296 aaPredicted RBP22.83■■□□□ 1.25
VSX1-206ENST00000444511 SRPRBQ9Y5M8 271 aaKnown RBP22.83■■□□□ 1.25
VSX1-206ENST00000444511 ANKRD63C9JTQ0 380 aa22.82■■□□□ 1.24
VSX1-206ENST00000444511 PPEF2O14830 753 aa22.82■■□□□ 1.24
VSX1-206ENST00000444511 LRRN2O75325 713 aa22.82■■□□□ 1.24
VSX1-206ENST00000444511 OR4Q2P0C623 313 aa22.82■■□□□ 1.24
VSX1-206ENST00000444511 MYL4P12829 197 aa22.82■■□□□ 1.24
VSX1-206ENST00000444511 CCR2P41597 374 aa22.82■■□□□ 1.24
VSX1-206ENST00000444511 ACOT2P49753 483 aa22.82■■□□□ 1.24
VSX1-206ENST00000444511 RESTQ13127 1097 aa22.82■■□□□ 1.24
VSX1-206ENST00000444511 TMEM132DQ14C87 1099 aa22.82■■□□□ 1.24
VSX1-206ENST00000444511 UBXN2BQ14CS0 331 aa22.82■■□□□ 1.24
VSX1-206ENST00000444511 OVOS1Q6IE37 1185 aa22.82■■□□□ 1.24
VSX1-206ENST00000444511 SLFN12LQ6IEE8 588 aa22.82■■□□□ 1.24
VSX1-206ENST00000444511 POTEHQ6S545 545 aa22.82■■□□□ 1.24
VSX1-206ENST00000444511 C1orf210Q8IVY1 113 aa22.82■■□□□ 1.24
VSX1-206ENST00000444511 HS6ST3Q8IZP7 471 aa22.82■■□□□ 1.24
VSX1-206ENST00000444511 DDX23Q9BUQ8 820 aaKnown RBP22.82■■□□□ 1.24
VSX1-206ENST00000444511 ST6GALNAC4Q9H4F1 302 aa22.82■■□□□ 1.24
VSX1-206ENST00000444511 ZFP14Q9HCL3 533 aa22.82■■□□□ 1.24
VSX1-206ENST00000444511 DERAQ9Y315 318 aa22.82■■□□□ 1.24
VSX1-206ENST00000444511 YIPF1Q9Y548 306 aa22.82■■□□□ 1.24
VSX1-206ENST00000444511 MYO15AQ9UKN7 3530 aa22.82■■□□□ 1.24
VSX1-206ENST00000444511 TISP43B9A030 160 aa22.81■■□□□ 1.24
VSX1-206ENST00000444511 NFICP08651 508 aa22.81■■□□□ 1.24
VSX1-206ENST00000444511 ODC1P11926 461 aa22.81■■□□□ 1.24
VSX1-206ENST00000444511 GLULP15104 373 aa22.81■■□□□ 1.24
VSX1-206ENST00000444511 TYMPP19971 482 aa22.81■■□□□ 1.24
VSX1-206ENST00000444511 SYT1P21579 422 aa22.81■■□□□ 1.24
VSX1-206ENST00000444511 PAX3P23760 479 aa22.81■■□□□ 1.24
VSX1-206ENST00000444511 LILRA4P59901 499 aa22.81■■□□□ 1.24
VSX1-206ENST00000444511 CEBPZQ03701 1054 aaKnown RBP22.81■■□□□ 1.24
VSX1-206ENST00000444511 PLD1Q13393 1074 aa22.81■■□□□ 1.24
VSX1-206ENST00000444511 FAM78AQ5JUQ0 283 aa22.81■■□□□ 1.24
VSX1-206ENST00000444511 RRAGBQ5VZM2 374 aa22.81■■□□□ 1.24
VSX1-206ENST00000444511 C9orf57Q5W0N0 161 aa22.81■■□□□ 1.24
VSX1-206ENST00000444511 FAM173BQ6P4H8 233 aa22.81■■□□□ 1.24
VSX1-206ENST00000444511 SFR1Q86XK3 245 aa22.81■■□□□ 1.24
VSX1-206ENST00000444511 SENP8Q96LD8 212 aa22.81■■□□□ 1.24
VSX1-206ENST00000444511 BCO2Q9BYV7 579 aa22.81■■□□□ 1.24
VSX1-206ENST00000444511 ASB7Q9H672 318 aa22.81■■□□□ 1.24
VSX1-206ENST00000444511 AGO2Q9UKV8 859 aaKnown RBP22.81■■□□□ 1.24
VSX1-206ENST00000444511 FAM170BA6NMN3 283 aa22.8■■□□□ 1.24
VSX1-206ENST00000444511 FCARP24071 287 aa22.8■■□□□ 1.24
VSX1-206ENST00000444511 DUSP4Q13115 394 aa22.8■■□□□ 1.24
VSX1-206ENST00000444511 GPR17Q13304 367 aa22.8■■□□□ 1.24
VSX1-206ENST00000444511 ARMCX5Q6P1M9 558 aa22.8■■□□□ 1.24
VSX1-206ENST00000444511 TPRG1Q6ZUI0 275 aa22.8■■□□□ 1.24
VSX1-206ENST00000444511 ZNF720Q7Z2F6 126 aa22.8■■□□□ 1.24
VSX1-206ENST00000444511 HVCN1Q96D96 273 aa22.8■■□□□ 1.24
VSX1-206ENST00000444511 CLIC6Q96NY7 704 aa22.8■■□□□ 1.24
VSX1-206ENST00000444511 OSBPL6Q9BZF3 934 aa22.8■■□□□ 1.24
VSX1-206ENST00000444511 SEL1LQ9UBV2 794 aa22.8■■□□□ 1.24
VSX1-206ENST00000444511 CD72P21854 359 aa22.79■■□□□ 1.24
VSX1-206ENST00000444511 EPHB3P54753 998 aa22.79■■□□□ 1.24
VSX1-206ENST00000444511 EPHA5P54756 1037 aa22.79■■□□□ 1.24
VSX1-206ENST00000444511 MYBPC2Q14324 1141 aa22.79■■□□□ 1.24
VSX1-206ENST00000444511 GRM2Q14416 872 aa22.79■■□□□ 1.24
VSX1-206ENST00000444511 SV2BQ7L1I2 683 aa22.79■■□□□ 1.24
VSX1-206ENST00000444511 ADSSL1Q8N142 457 aa22.79■■□□□ 1.24
VSX1-206ENST00000444511 KCNG4Q8TDN1 519 aa22.79■■□□□ 1.24
VSX1-206ENST00000444511 POMGNT1Q8WZA1 660 aa22.79■■□□□ 1.24
VSX1-206ENST00000444511 SMARCD2Q92925 531 aa22.79■■□□□ 1.24
VSX1-206ENST00000444511 ASB16Q96NS5 453 aa22.79■■□□□ 1.24
VSX1-206ENST00000444511 BRD9Q9H8M2 597 aa22.79■■□□□ 1.24
VSX1-206ENST00000444511 MRPL44Q9H9J2 332 aaKnown RBP22.79■■□□□ 1.24
VSX1-206ENST00000444511 LTB4R2Q9NPC1 389 aa22.79■■□□□ 1.24
VSX1-206ENST00000444511 C2CD2Q9Y426 696 aa22.79■■□□□ 1.24
VSX1-206ENST00000444511 MTF2Q9Y483 593 aaPredicted RBP22.79■■□□□ 1.24
VSX1-206ENST00000444511 STYXL1Q9Y6J8 313 aa22.79■■□□□ 1.24
VSX1-206ENST00000444511 R4GN57 208 aa22.79■■□□□ 1.24
VSX1-206ENST00000444511 PIRO00625 290 aa22.78■■□□□ 1.24
VSX1-206ENST00000444511 NRG2O14511 850 aaPredicted RBP22.78■■□□□ 1.24
VSX1-206ENST00000444511 SPTLC1O15269 473 aa22.78■■□□□ 1.24
VSX1-206ENST00000444511 VNN2O95498 520 aa22.78■■□□□ 1.24
VSX1-206ENST00000444511 GJA1P17302 382 aa22.78■■□□□ 1.24
VSX1-206ENST00000444511 GAP43P17677 238 aa22.78■■□□□ 1.24
VSX1-206ENST00000444511 ALDH1A3P47895 512 aa22.78■■□□□ 1.24
VSX1-206ENST00000444511 POSTNQ15063 836 aa22.78■■□□□ 1.24
VSX1-206ENST00000444511 ZC3H14Q6PJT7 736 aaKnown RBP22.78■■□□□ 1.24
VSX1-206ENST00000444511 DNASE1L2Q92874 299 aa22.78■■□□□ 1.24
VSX1-206ENST00000444511 INTS4Q96HW7 963 aaKnown RBP22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms