RNA–Protein interactions for RNA: ENST00000440538.6

PUM1-207, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 1 (best) BASIC

Gene PUM1, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-207ENST00000440538 FAM153AQ9UHL3 310 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 IPPQ9Y573 584 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 NUB1Q9Y5A7 615 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 GPR182O15218 404 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 SHOX2O60902 331 aaPredicted RBP6.72□□□□□ -1.33
PUM1-207ENST00000440538 MOCS3O95396 460 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 ITGA4P13612 1032 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 DNAJB2P25686 324 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 HOXA11P31270 313 aaPredicted RBP6.72□□□□□ -1.33
PUM1-207ENST00000440538 OR1G1P47890 313 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 MNX1P50219 401 aaPredicted RBP6.72□□□□□ -1.33
PUM1-207ENST00000440538 MXI1P50539 228 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 MYL7Q01449 175 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 EHHADHQ08426 723 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 IFRD2Q12894 506 aaPredicted RBP6.72□□□□□ -1.33
PUM1-207ENST00000440538 PTK7Q13308 1070 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 SPRED3Q2MJR0 410 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 LRRC55Q6ZSA7 311 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 FAM114A1Q8IWE2 563 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 OTUD6BQ8N6M0 293 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 TAS1R2Q8TE23 839 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 IFT81Q8WYA0 676 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 RNPC3Q96LT9 517 aaKnown RBP6.72□□□□□ -1.33
PUM1-207ENST00000440538 FAM193BQ96PV7 902 aaPredicted RBP6.72□□□□□ -1.33
PUM1-207ENST00000440538 PAAF1Q9BRP4 392 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.72□□□□□ -1.332e-6■■■■□ 21
PUM1-207ENST00000440538 FAM105AQ9NUU6 356 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 TUBGCP4Q9UGJ1 667 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 AGAP1Q9UPQ3 857 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 MGAMO43451 1857 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 TBKBP1A7MCY6 615 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 PPEF2O14830 753 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 OGTO15294 1046 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 CDH8P55286 799 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 BFSP1Q12934 665 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 WDR72Q3MJ13 1102 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 SWT1Q5T5J6 900 aaKnown RBP6.72□□□□□ -1.33
PUM1-207ENST00000440538 SLC27A1Q6PCB7 646 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 EPM2AIP1Q7L775 607 aaPredicted RBP6.72□□□□□ -1.33
PUM1-207ENST00000440538 ZIM3Q96PE6 472 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 WNT8AQ9H1J5 351 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 CAPN6Q9Y6Q1 641 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 PTPRJQ12913 1337 aa6.72□□□□□ -1.33
PUM1-207ENST00000440538 H0YCG3 227 aa6.71□□□□□ -1.33
PUM1-207ENST00000440538 PIK3R2O00459 728 aa6.71□□□□□ -1.33
PUM1-207ENST00000440538 EPHB6O15197 1021 aa6.71□□□□□ -1.33
PUM1-207ENST00000440538 EIF3DO15371 548 aaKnown RBP eCLIP6.71□□□□□ -1.33
PUM1-207ENST00000440538 GAS2O43903 313 aaKnown RBP6.71□□□□□ -1.33
PUM1-207ENST00000440538 AFPP02771 609 aaKnown RBP6.71□□□□□ -1.33
PUM1-207ENST00000440538 PDGFRBP09619 1106 aa6.71□□□□□ -1.33
PUM1-207ENST00000440538 HOXD8P13378 290 aaPredicted RBP6.71□□□□□ -1.33
PUM1-207ENST00000440538 CST5P28325 142 aaPredicted RBP6.71□□□□□ -1.33
PUM1-207ENST00000440538 POLR2BP30876 1174 aaKnown RBP6.71□□□□□ -1.33
PUM1-207ENST00000440538 FNTAP49354 379 aa6.71□□□□□ -1.33
PUM1-207ENST00000440538 RABGGTBP53611 331 aa6.71□□□□□ -1.33
PUM1-207ENST00000440538 IFT88Q13099 833 aa6.71□□□□□ -1.33
PUM1-207ENST00000440538 E2F5Q15329 346 aa6.71□□□□□ -1.33
PUM1-207ENST00000440538 EXOC3L4Q17RC7 722 aa6.71□□□□□ -1.33
PUM1-207ENST00000440538 VWA3BQ502W6 1294 aa6.71□□□□□ -1.33
PUM1-207ENST00000440538 FAM161BQ96MY7 647 aa6.71□□□□□ -1.33
PUM1-207ENST00000440538 TSEN34Q9BSV6 310 aaKnown RBP6.71□□□□□ -1.33
PUM1-207ENST00000440538 VIPAS39Q9H9C1 493 aa6.71□□□□□ -1.33
PUM1-207ENST00000440538 C17orf75Q9HAS0 396 aa6.71□□□□□ -1.33
PUM1-207ENST00000440538 UBE2TQ9NPD8 197 aaPredicted RBP6.71□□□□□ -1.33
PUM1-207ENST00000440538 CEP83Q9Y592 693 aa6.71□□□□□ -1.33
PUM1-207ENST00000440538 CHD7Q9P2D1 2997 aa6.71□□□□□ -1.33
PUM1-207ENST00000440538 VCANP13611 3396 aa6.71□□□□□ -1.33
PUM1-207ENST00000440538 ZNF263O14978 683 aa6.71□□□□□ -1.34
PUM1-207ENST00000440538 SKAP2O75563 359 aaPredicted RBP6.71□□□□□ -1.34
PUM1-207ENST00000440538 B3GAT3O94766 335 aa6.71□□□□□ -1.34
PUM1-207ENST00000440538 CST3P01034 146 aaPredicted RBP6.71□□□□□ -1.34
PUM1-207ENST00000440538 IGHA2P01877 340 aa6.71□□□□□ -1.34
PUM1-207ENST00000440538 HPDP32754 393 aaPredicted RBP6.71□□□□□ -1.34
PUM1-207ENST00000440538 ADAM17P78536 824 aa6.71□□□□□ -1.34
PUM1-207ENST00000440538 DEFB103AP81534 67 aa6.71□□□□□ -1.34
PUM1-207ENST00000440538 TCTN1Q2MV58 587 aa6.71□□□□□ -1.34
PUM1-207ENST00000440538 SLFN12LQ6IEE8 588 aa6.71□□□□□ -1.34
PUM1-207ENST00000440538 ZNF365Q70YC5 407 aa6.71□□□□□ -1.34
PUM1-207ENST00000440538 ZNF410Q86VK4 478 aa6.71□□□□□ -1.34
PUM1-207ENST00000440538 AENQ8WTP8 325 aaKnown RBP6.71□□□□□ -1.34
PUM1-207ENST00000440538 TATDN2Q93075 761 aa6.71□□□□□ -1.34
PUM1-207ENST00000440538 TIPINQ9BVW5 301 aa6.71□□□□□ -1.34
PUM1-207ENST00000440538 FZD8Q9H461 694 aa6.71□□□□□ -1.34
PUM1-207ENST00000440538 LUC7L2Q9Y383 392 aaKnown RBP6.71□□□□□ -1.34
PUM1-207ENST00000440538 PCDHB7Q9Y5E2 793 aa6.71□□□□□ -1.34
PUM1-207ENST00000440538 SNX9Q9Y5X1 595 aa6.71□□□□□ -1.34
PUM1-207ENST00000440538 COL1A2P08123 1366 aa6.71□□□□□ -1.34
PUM1-207ENST00000440538 HCRTO43612 131 aa6.71□□□□□ -1.34
PUM1-207ENST00000440538 EXTL3O43909 919 aa6.71□□□□□ -1.34
PUM1-207ENST00000440538 CD19P15391 556 aa6.71□□□□□ -1.34
PUM1-207ENST00000440538 MYL6P60660 151 aa6.71□□□□□ -1.34
PUM1-207ENST00000440538 CYP24A1Q07973 514 aa6.71□□□□□ -1.34
PUM1-207ENST00000440538 NNTQ13423 1086 aa6.71□□□□□ -1.34
PUM1-207ENST00000440538 GBP6Q6ZN66 633 aa6.71□□□□□ -1.34
PUM1-207ENST00000440538 SV2AQ7L0J3 742 aa6.71□□□□□ -1.34
PUM1-207ENST00000440538 OR8K1Q8NGG5 319 aa6.71□□□□□ -1.34
PUM1-207ENST00000440538 SEPT8Q92599 483 aa6.71□□□□□ -1.34
PUM1-207ENST00000440538 NHEJ1Q9H9Q4 299 aaPredicted RBP6.71□□□□□ -1.34
PUM1-207ENST00000440538 SLC24A3Q9HC58 644 aa6.71□□□□□ -1.34
PUM1-207ENST00000440538 PPANQ9NQ55 473 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms