RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 TIMM13Q9Y5L4 95 aaPredicted RBP16.59■□□□□ 0.25
NUP50-204ENST00000417702 DENND4AQ7Z401 1863 aa16.59■□□□□ 0.25
NUP50-204ENST00000417702 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.58■□□□□ 0.24
NUP50-204ENST00000417702 PIRO00625 290 aa16.58■□□□□ 0.24
NUP50-204ENST00000417702 PPEF2O14830 753 aa16.58■□□□□ 0.24
NUP50-204ENST00000417702 KIAA0391O15091 583 aaKnown RBP16.58■□□□□ 0.24
NUP50-204ENST00000417702 EIF3DO15371 548 aaKnown RBP eCLIP16.58■□□□□ 0.24
NUP50-204ENST00000417702 EXTL3O43909 919 aa16.58■□□□□ 0.24
NUP50-204ENST00000417702 N4BP1O75113 896 aaKnown RBP16.58■□□□□ 0.24
NUP50-204ENST00000417702 LRG1P02750 347 aa16.58■□□□□ 0.24
NUP50-204ENST00000417702 CPB1P15086 417 aa16.58■□□□□ 0.24
NUP50-204ENST00000417702 TYMPP19971 482 aa16.58■□□□□ 0.24
NUP50-204ENST00000417702 AFMP43652 599 aa16.58■□□□□ 0.24
NUP50-204ENST00000417702 TDGQ13569 410 aa16.58■□□□□ 0.24
NUP50-204ENST00000417702 UNC13DQ70J99 1090 aa16.58■□□□□ 0.24
NUP50-204ENST00000417702 BRSK2Q8IWQ3 736 aa16.58■□□□□ 0.24
NUP50-204ENST00000417702 SUGP1Q8IWZ8 645 aaKnown RBP16.58■□□□□ 0.24
NUP50-204ENST00000417702 CACTINQ8WUQ7 758 aaKnown RBP16.58■□□□□ 0.24
NUP50-204ENST00000417702 LEO1Q8WVC0 666 aaPredicted RBP16.58■□□□□ 0.24
NUP50-204ENST00000417702 HPS3Q969F9 1004 aa16.58■□□□□ 0.24
NUP50-204ENST00000417702 CBWD1Q9BRT8 395 aa16.58■□□□□ 0.24
NUP50-204ENST00000417702 BLZF1Q9H2G9 400 aa16.58■□□□□ 0.24
NUP50-204ENST00000417702 KCNK12Q9HB15 430 aa16.58■□□□□ 0.24
NUP50-204ENST00000417702 CYP4F11Q9HBI6 524 aa16.58■□□□□ 0.24
NUP50-204ENST00000417702 RBAKQ9NYW8 714 aaPredicted RBP16.58■□□□□ 0.24
NUP50-204ENST00000417702 AFF4Q9UHB7 1163 aaKnown RBP16.58■□□□□ 0.24
NUP50-204ENST00000417702 MAFFQ9ULX9 164 aa16.58■□□□□ 0.24
NUP50-204ENST00000417702 ZDHHC9Q9Y397 364 aa16.58■□□□□ 0.24
NUP50-204ENST00000417702 ZFP37Q9Y6Q3 630 aaPredicted RBP16.58■□□□□ 0.24
NUP50-204ENST00000417702 DOCK6Q96HP0 2047 aa16.57■□□□□ 0.24
NUP50-204ENST00000417702 PVALEFA0A1B0GWK0 134 aa16.57■□□□□ 0.24
NUP50-204ENST00000417702 ANO9A1A5B4 782 aa16.57■□□□□ 0.24
NUP50-204ENST00000417702 GOLGA8IPA6NC78 632 aa16.57■□□□□ 0.24
NUP50-204ENST00000417702 OR6C75A6NL08 312 aa16.57■□□□□ 0.24
NUP50-204ENST00000417702 GOLGA8JA6NMD2 632 aa16.57■□□□□ 0.24
NUP50-204ENST00000417702 SLFN14P0C7P3 912 aa16.57■□□□□ 0.24
NUP50-204ENST00000417702 ODC1P11926 461 aa16.57■□□□□ 0.24
NUP50-204ENST00000417702 LAMP2P13473 410 aa16.57■□□□□ 0.24
NUP50-204ENST00000417702 CMA1P23946 247 aa16.57■□□□□ 0.24
NUP50-204ENST00000417702 TAF6P49848 677 aa16.57■□□□□ 0.24
NUP50-204ENST00000417702 NTHL1P78549 312 aa16.57■□□□□ 0.24
NUP50-204ENST00000417702 TFAMQ00059 246 aaKnown RBP16.57■□□□□ 0.24
NUP50-204ENST00000417702 OVOS1Q6IE37 1185 aa16.57■□□□□ 0.24
NUP50-204ENST00000417702 TCEAL8Q8IYN2 117 aa16.57■□□□□ 0.24
NUP50-204ENST00000417702 GPD1LQ8N335 351 aa16.57■□□□□ 0.24
NUP50-204ENST00000417702 NXPE3Q969Y0 559 aa16.57■□□□□ 0.24
NUP50-204ENST00000417702 ASIC4Q96FT7 647 aa16.57■□□□□ 0.24
NUP50-204ENST00000417702 SENP8Q96LD8 212 aa16.57■□□□□ 0.24
NUP50-204ENST00000417702 PCIF1Q9H4Z3 704 aa16.57■□□□□ 0.24
NUP50-204ENST00000417702 DSEQ9UL01 958 aa16.57■□□□□ 0.24
NUP50-204ENST00000417702 ARIH1Q9Y4X5 557 aaPredicted RBP16.57■□□□□ 0.24
NUP50-204ENST00000417702 UBE4BO95155 1302 aa16.56■□□□□ 0.24
NUP50-204ENST00000417702 ADCY1Q08828 1119 aa16.56■□□□□ 0.24
NUP50-204ENST00000417702 PABPC1LQ4VXU2 614 aaKnown RBP16.56■□□□□ 0.24
NUP50-204ENST00000417702 METTL23Q86XA0 190 aa16.56■□□□□ 0.24
NUP50-204ENST00000417702 EFCAB13Q8IY85 973 aa16.56■□□□□ 0.24
NUP50-204ENST00000417702 ELMOD1Q8N336 334 aa16.56■□□□□ 0.24
NUP50-204ENST00000417702 FBXL6Q8N531 539 aa16.56■□□□□ 0.24
NUP50-204ENST00000417702 GLIS3Q8NEA6 775 aa16.56■□□□□ 0.24
NUP50-204ENST00000417702 ZSWIM2Q8NEG5 633 aa16.56■□□□□ 0.24
NUP50-204ENST00000417702 ZNF507Q8TCN5 953 aa16.56■□□□□ 0.24
NUP50-204ENST00000417702 ZNF560Q96MR9 790 aa16.56■□□□□ 0.24
NUP50-204ENST00000417702 SCAND2PQ9GZW5 306 aaPredicted RBP16.56■□□□□ 0.24
NUP50-204ENST00000417702 DNMT3BQ9UBC3 853 aaKnown RBP16.56■□□□□ 0.24
NUP50-204ENST00000417702 USP25Q9UHP3 1055 aa16.56■□□□□ 0.24
NUP50-204ENST00000417702 SERTAD1Q9UHV2 236 aa16.56■□□□□ 0.24
NUP50-204ENST00000417702 CDH7Q9ULB5 785 aa16.56■□□□□ 0.24
NUP50-204ENST00000417702 DOCK8Q8NF50 2099 aa16.56■□□□□ 0.24
NUP50-204ENST00000417702 A0A1B0GVL5 298 aa16.55■□□□□ 0.24
NUP50-204ENST00000417702 ZNF233A6NK53 670 aa16.55■□□□□ 0.24
NUP50-204ENST00000417702 SPTLC1O15269 473 aa16.55■□□□□ 0.24
NUP50-204ENST00000417702 SEC24AO95486 1093 aa16.55■□□□□ 0.24
NUP50-204ENST00000417702 PFKFB1P16118 471 aa16.55■□□□□ 0.24
NUP50-204ENST00000417702 PTPN2P17706 415 aa16.55■□□□□ 0.24
NUP50-204ENST00000417702 CASP1P29466 404 aa16.55■□□□□ 0.24
NUP50-204ENST00000417702 PNPLA4P41247 253 aa16.55■□□□□ 0.24
NUP50-204ENST00000417702 CUL4BQ13620 913 aa16.55■□□□□ 0.24
NUP50-204ENST00000417702 MYBPC2Q14324 1141 aa16.55■□□□□ 0.24
NUP50-204ENST00000417702 SV2CQ496J9 727 aa16.55■□□□□ 0.24
NUP50-204ENST00000417702 EPM2AIP1Q7L775 607 aaPredicted RBP16.55■□□□□ 0.24
NUP50-204ENST00000417702 SMOC2Q9H3U7 446 aa16.55■□□□□ 0.24
NUP50-204ENST00000417702 KIAA1586Q9HCI6 787 aa16.55■□□□□ 0.24
NUP50-204ENST00000417702 HCFC1R1Q9NWW0 138 aa16.55■□□□□ 0.24
NUP50-204ENST00000417702 DUSP12Q9UNI6 340 aa16.55■□□□□ 0.24
NUP50-204ENST00000417702 MRPS23Q9Y3D9 190 aaKnown RBP16.55■□□□□ 0.24
NUP50-204ENST00000417702 INSL5Q9Y5Q6 135 aa16.55■□□□□ 0.24
NUP50-204ENST00000417702 MUC6Q6W4X9 2439 aa16.54■□□□□ 0.24
NUP50-204ENST00000417702 CYB561D2O14569 222 aa16.54■□□□□ 0.24
NUP50-204ENST00000417702 ACTN4O43707 911 aaKnown RBP16.54■□□□□ 0.24
NUP50-204ENST00000417702 CYP11A1P05108 521 aa16.54■□□□□ 0.24
NUP50-204ENST00000417702 RHOP08100 348 aa16.54■□□□□ 0.24
NUP50-204ENST00000417702 SNRPFP62306 86 aaKnown RBP16.54■□□□□ 0.24
NUP50-204ENST00000417702 EHHADHQ08426 723 aa16.54■□□□□ 0.24
NUP50-204ENST00000417702 GPR17Q13304 367 aa16.54■□□□□ 0.24
NUP50-204ENST00000417702 SURF1Q15526 300 aa16.54■□□□□ 0.24
NUP50-204ENST00000417702 IQCEQ6IPM2 695 aa16.54■□□□□ 0.24
NUP50-204ENST00000417702 RNF19BQ6ZMZ0 732 aa16.54■□□□□ 0.24
NUP50-204ENST00000417702 HS2ST1Q7LGA3 356 aa16.54■□□□□ 0.24
NUP50-204ENST00000417702 NELFCDQ8IXH7 590 aa16.54■□□□□ 0.24
NUP50-204ENST00000417702 GRAMD1CQ8IYS0 662 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms