RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 ZNF707Q96C28 371 aaPredicted RBP12.13□□□□□ -0.47
RFFL-204ENST00000414419 CHAMP1Q96JM3 812 aa12.13□□□□□ -0.47
RFFL-204ENST00000414419 CBWD1Q9BRT8 395 aa12.13□□□□□ -0.47
RFFL-204ENST00000414419 OXCT2Q9BYC2 517 aaPredicted RBP12.13□□□□□ -0.47
RFFL-204ENST00000414419 FBXL5Q9UKA1 691 aa12.13□□□□□ -0.47
RFFL-204ENST00000414419 R3HCC1Q9Y3T6 440 aaKnown RBP12.13□□□□□ -0.47
RFFL-204ENST00000414419 DOCK8Q8NF50 2099 aa12.13□□□□□ -0.47
RFFL-204ENST00000414419 UBE4BO95155 1302 aa12.12□□□□□ -0.47
RFFL-204ENST00000414419 GOLGA6L4A6NEF3 574 aa12.12□□□□□ -0.47
RFFL-204ENST00000414419 ZNF233A6NK53 670 aa12.12□□□□□ -0.47
RFFL-204ENST00000414419 PIRO00625 290 aa12.12□□□□□ -0.47
RFFL-204ENST00000414419 LRG1P02750 347 aa12.12□□□□□ -0.47
RFFL-204ENST00000414419 MYL1P05976 194 aa12.12□□□□□ -0.47
RFFL-204ENST00000414419 ATF2P15336 505 aa12.12□□□□□ -0.47
RFFL-204ENST00000414419 TAF6P49848 677 aa12.12□□□□□ -0.47
RFFL-204ENST00000414419 TFAMQ00059 246 aaKnown RBP12.12□□□□□ -0.47
RFFL-204ENST00000414419 MTMR3Q13615 1198 aa12.12□□□□□ -0.47
RFFL-204ENST00000414419 TPGS2Q68CL5 300 aa12.12□□□□□ -0.47
RFFL-204ENST00000414419 OVOS1Q6IE37 1185 aa12.12□□□□□ -0.47
RFFL-204ENST00000414419 GET4Q7L5D6 327 aaPredicted RBP12.12□□□□□ -0.47
RFFL-204ENST00000414419 HS2ST1Q7LGA3 356 aa12.12□□□□□ -0.47
RFFL-204ENST00000414419 GRASPQ7Z6J2 395 aaPredicted RBP12.12□□□□□ -0.47
RFFL-204ENST00000414419 METTL23Q86XA0 190 aa12.12□□□□□ -0.47
RFFL-204ENST00000414419 NELFCDQ8IXH7 590 aa12.12□□□□□ -0.47
RFFL-204ENST00000414419 GRAMD1CQ8IYS0 662 aa12.12□□□□□ -0.47
RFFL-204ENST00000414419 TMEM130Q8N3G9 435 aa12.12□□□□□ -0.47
RFFL-204ENST00000414419 GLIS3Q8NEA6 775 aa12.12□□□□□ -0.47
RFFL-204ENST00000414419 CCDC47Q96A33 483 aaKnown RBP12.12□□□□□ -0.47
RFFL-204ENST00000414419 PAGE5Q96GU1 130 aa12.12□□□□□ -0.47
RFFL-204ENST00000414419 CCDC34Q96HJ3 373 aa12.12□□□□□ -0.47
RFFL-204ENST00000414419 SENP8Q96LD8 212 aa12.12□□□□□ -0.47
RFFL-204ENST00000414419 ZNF560Q96MR9 790 aa12.12□□□□□ -0.47
RFFL-204ENST00000414419 CYP4F11Q9HBI6 524 aa12.12□□□□□ -0.47
RFFL-204ENST00000414419 KIAA1586Q9HCI6 787 aa12.12□□□□□ -0.47
RFFL-204ENST00000414419 SLC39A2Q9NP94 309 aa12.12□□□□□ -0.47
RFFL-204ENST00000414419 C11orf16Q9NQ32 467 aa12.12□□□□□ -0.47
RFFL-204ENST00000414419 EXOC1Q9NV70 894 aa12.12□□□□□ -0.47
RFFL-204ENST00000414419 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.12□□□□□ -0.47
RFFL-204ENST00000414419 SORCS3Q9UPU3 1222 aa12.12□□□□□ -0.47
RFFL-204ENST00000414419 TIMM13Q9Y5L4 95 aaPredicted RBP12.12□□□□□ -0.47
RFFL-204ENST00000414419 TECTAO75443 2155 aa12.12□□□□□ -0.47
RFFL-204ENST00000414419 TRIOO75962 3097 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 A0A1W2PQ27 194 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 A0A1W2PQ64 194 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 A0A1W2PQD8 194 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 ANO9A1A5B4 782 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 WDR27A2RRH5 827 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 OR6C75A6NL08 312 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 PPEF2O14830 753 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 ACTN4O43707 911 aaKnown RBP12.11□□□□□ -0.47
RFFL-204ENST00000414419 TBC1D4O60343 1298 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 ABLIM3O94929 683 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 OAZ2O95190 189 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 PAPLNO95428 1278 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 ASGR2P07307 311 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 TMEM191BP0C7N4 346 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 TYMPP19971 482 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 FSHRP23945 695 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 PNPLA4P41247 253 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 AARSP49588 968 aaKnown RBP eCLIP12.11□□□□□ -0.47
RFFL-204ENST00000414419 SNRPFP62306 86 aaKnown RBP12.11□□□□□ -0.47
RFFL-204ENST00000414419 ADCY1Q08828 1119 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 SIGLEC14Q08ET2 396 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 PSMD2Q13200 908 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 SURF1Q15526 300 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 SV2CQ496J9 727 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 TRIM67Q6ZTA4 783 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 EPM2AIP1Q7L775 607 aaPredicted RBP12.11□□□□□ -0.47
RFFL-204ENST00000414419 EFCAB13Q8IY85 973 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 UBALD2Q8IYN6 164 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 ELMOD1Q8N336 334 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 FSIP1Q8NA03 581 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 ZSWIM2Q8NEG5 633 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 ANKRD36BP1Q96IX9 119 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 HSPBP1Q9NZL4 362 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 CGNQ9P2M7 1197 aaKnown RBP12.11□□□□□ -0.47
RFFL-204ENST00000414419 AFF4Q9UHB7 1163 aaKnown RBP12.11□□□□□ -0.47
RFFL-204ENST00000414419 DSEQ9UL01 958 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 MAFFQ9ULX9 164 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 HPSEQ9Y251 543 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 HCN4Q9Y3Q4 1203 aa12.11□□□□□ -0.47
RFFL-204ENST00000414419 TMEM221A6NGB7 291 aa12.1□□□□□ -0.47
RFFL-204ENST00000414419 M0R296 226 aa12.1□□□□□ -0.47
RFFL-204ENST00000414419 CYB561D2O14569 222 aa12.1□□□□□ -0.47
RFFL-204ENST00000414419 CLIC2O15247 247 aa12.1□□□□□ -0.47
RFFL-204ENST00000414419 KRT19P08727 400 aa12.1□□□□□ -0.47
RFFL-204ENST00000414419 POU2F2P09086 479 aa12.1□□□□□ -0.47
RFFL-204ENST00000414419 NDUFA8P51970 172 aa12.1□□□□□ -0.47
RFFL-204ENST00000414419 EHHADHQ08426 723 aa12.1□□□□□ -0.47
RFFL-204ENST00000414419 KNOP1Q1ED39 458 aaKnown RBP12.1□□□□□ -0.47
RFFL-204ENST00000414419 PABPC1LQ4VXU2 614 aaKnown RBP12.1□□□□□ -0.47
RFFL-204ENST00000414419 TCEAL8Q8IYN2 117 aa12.1□□□□□ -0.47
RFFL-204ENST00000414419 THEM5Q8N1Q8 247 aa12.1□□□□□ -0.47
RFFL-204ENST00000414419 CSGALNACT2Q8N6G5 542 aa12.1□□□□□ -0.47
RFFL-204ENST00000414419 RDH13Q8NBN7 331 aa12.1□□□□□ -0.47
RFFL-204ENST00000414419 SCFD1Q8WVM8 642 aa12.1□□□□□ -0.47
RFFL-204ENST00000414419 PBXIP1Q96AQ6 731 aa12.1□□□□□ -0.47
RFFL-204ENST00000414419 MFSD14AQ96MC6 490 aa12.1□□□□□ -0.47
RFFL-204ENST00000414419 GDPD2Q9HCC8 539 aa12.1□□□□□ -0.47
RFFL-204ENST00000414419 PDE11AQ9HCR9 933 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms