RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 ANAPC5Q9UJX4 755 aa16.88■□□□□ 0.29
HOXD3-202ENST00000410016 LRRIQ4A6NIV6 560 aa16.87■□□□□ 0.29
HOXD3-202ENST00000410016 GHRP10912 638 aa16.87■□□□□ 0.29
HOXD3-202ENST00000410016 ICAM3P32942 547 aa16.87■□□□□ 0.29
HOXD3-202ENST00000410016 NOP14P78316 857 aaKnown RBP16.87■□□□□ 0.29
HOXD3-202ENST00000410016 C1QBPQ07021 282 aaKnown RBP16.87■□□□□ 0.29
HOXD3-202ENST00000410016 ITIH4Q14624 930 aa16.87■□□□□ 0.29
HOXD3-202ENST00000410016 CCDC50Q8IVM0 306 aa16.87■□□□□ 0.29
HOXD3-202ENST00000410016 RBBP8NLQ8NC74 664 aaPredicted RBP16.87■□□□□ 0.29
HOXD3-202ENST00000410016 EXD1Q8NHP7 514 aa16.87■□□□□ 0.29
HOXD3-202ENST00000410016 CGRRF1Q99675 332 aa16.87■□□□□ 0.29
HOXD3-202ENST00000410016 FAM118BQ9BPY3 351 aa16.87■□□□□ 0.29
HOXD3-202ENST00000410016 MSTO1Q9BUK6 570 aa16.87■□□□□ 0.29
HOXD3-202ENST00000410016 NIFKQ9BYG3 293 aaKnown RBP16.87■□□□□ 0.29
HOXD3-202ENST00000410016 CCDC113Q9H0I3 377 aa16.87■□□□□ 0.29
HOXD3-202ENST00000410016 CTNNAL1Q9UBT7 734 aa16.87■□□□□ 0.29
HOXD3-202ENST00000410016 IGKV6D-21A0A0A0MT36 114 aa16.87■□□□□ 0.29
HOXD3-202ENST00000410016 C19orf81C9J6K1 198 aa16.87■□□□□ 0.29
HOXD3-202ENST00000410016 TLR3O15455 904 aaKnown RBP16.87■□□□□ 0.29
HOXD3-202ENST00000410016 GJB6O95452 261 aa16.87■□□□□ 0.29
HOXD3-202ENST00000410016 LDHAP00338 332 aaKnown RBP16.87■□□□□ 0.29
HOXD3-202ENST00000410016 IFNAR2P48551 515 aa16.87■□□□□ 0.29
HOXD3-202ENST00000410016 RELL1Q8IUW5 271 aa16.87■□□□□ 0.29
HOXD3-202ENST00000410016 DEPTORQ8TB45 409 aa16.87■□□□□ 0.29
HOXD3-202ENST00000410016 SCLT1Q96NL6 688 aa16.87■□□□□ 0.29
HOXD3-202ENST00000410016 KLC4Q9NSK0 619 aa16.87■□□□□ 0.29
HOXD3-202ENST00000410016 NINJ2Q9NZG7 142 aa16.87■□□□□ 0.29
HOXD3-202ENST00000410016 TBXAS1P24557 533 aaPredicted RBP16.86■□□□□ 0.29
HOXD3-202ENST00000410016 KLRC2P26717 231 aa16.86■□□□□ 0.29
HOXD3-202ENST00000410016 VPS41P49754 854 aa16.86■□□□□ 0.29
HOXD3-202ENST00000410016 ZNF132P52740 706 aa16.86■□□□□ 0.29
HOXD3-202ENST00000410016 ZNF606Q8WXB4 792 aa16.86■□□□□ 0.29
HOXD3-202ENST00000410016 ELAC2Q9BQ52 826 aaKnown RBP16.86■□□□□ 0.29
HOXD3-202ENST00000410016 ANKFY1Q9P2R3 1169 aa16.86■□□□□ 0.29
HOXD3-202ENST00000410016 TMEM120BA0PK00 339 aa16.86■□□□□ 0.29
HOXD3-202ENST00000410016 FOXO6A8MYZ6 492 aa16.86■□□□□ 0.29
HOXD3-202ENST00000410016 MMP8P22894 467 aa16.86■□□□□ 0.29
HOXD3-202ENST00000410016 RPL7AP62424 266 aaKnown RBP16.86■□□□□ 0.29
HOXD3-202ENST00000410016 NCOA4Q13772 614 aa16.86■□□□□ 0.29
HOXD3-202ENST00000410016 MPP2Q14168 576 aa16.86■□□□□ 0.29
HOXD3-202ENST00000410016 STXBP2Q15833 593 aa16.86■□□□□ 0.29
HOXD3-202ENST00000410016 SEZ6Q53EL9 994 aa16.86■□□□□ 0.29
HOXD3-202ENST00000410016 SWT1Q5T5J6 900 aaKnown RBP16.86■□□□□ 0.29
HOXD3-202ENST00000410016 UBR7Q8N806 425 aa16.86■□□□□ 0.29
HOXD3-202ENST00000410016 ANKS4BQ8N8V4 417 aa16.86■□□□□ 0.29
HOXD3-202ENST00000410016 CCDC89Q8N998 374 aa16.86■□□□□ 0.29
HOXD3-202ENST00000410016 FEZF2Q8TBJ5 459 aa16.86■□□□□ 0.29
HOXD3-202ENST00000410016 FAM212AQ96EL1 285 aa16.86■□□□□ 0.29
HOXD3-202ENST00000410016 MAF1Q9H063 256 aa16.86■□□□□ 0.29
HOXD3-202ENST00000410016 SCINQ9Y6U3 715 aa16.86■□□□□ 0.29
HOXD3-202ENST00000410016 PHIPQ8WWQ0 1821 aa16.85■□□□□ 0.29
HOXD3-202ENST00000410016 DOCK1Q14185 1865 aa16.85■□□□□ 0.29
HOXD3-202ENST00000410016 TTLL13PA6NNM8 815 aa16.85■□□□□ 0.29
HOXD3-202ENST00000410016 SPDYE16A6NNV3 312 aaPredicted RBP16.85■□□□□ 0.29
HOXD3-202ENST00000410016 THAP12O43422 761 aa16.85■□□□□ 0.29
HOXD3-202ENST00000410016 CST3P01034 146 aaPredicted RBP16.85■□□□□ 0.29
HOXD3-202ENST00000410016 VIMP08670 466 aaKnown RBP16.85■□□□□ 0.29
HOXD3-202ENST00000410016 CD58P19256 250 aa16.85■□□□□ 0.29
HOXD3-202ENST00000410016 XRCC4Q13426 336 aa16.85■□□□□ 0.29
HOXD3-202ENST00000410016 TARBP2Q15633 366 aaKnown RBP16.85■□□□□ 0.29
HOXD3-202ENST00000410016 ATP13A4Q4VNC1 1196 aa16.85■□□□□ 0.29
HOXD3-202ENST00000410016 PRUNE1Q86TP1 453 aa16.85■□□□□ 0.29
HOXD3-202ENST00000410016 TAX1BP1Q86VP1 789 aa16.85■□□□□ 0.29
HOXD3-202ENST00000410016 FUKQ8N0W3 1084 aa16.85■□□□□ 0.29
HOXD3-202ENST00000410016 CYP4X1Q8N118 509 aa16.85■□□□□ 0.29
HOXD3-202ENST00000410016 SLC7A3Q8WY07 619 aa16.85■□□□□ 0.29
HOXD3-202ENST00000410016 PCYT2Q99447 389 aa16.85■□□□□ 0.29
HOXD3-202ENST00000410016 TMEM134Q9H6X4 195 aa16.85■□□□□ 0.29
HOXD3-202ENST00000410016 PARVAQ9NVD7 372 aa16.85■□□□□ 0.29
HOXD3-202ENST00000410016 CETPP11597 493 aa16.85■□□□□ 0.29
HOXD3-202ENST00000410016 TCF4P15884 667 aa16.85■□□□□ 0.29
HOXD3-202ENST00000410016 CNTN2Q02246 1040 aa16.85■□□□□ 0.29
HOXD3-202ENST00000410016 NFX1Q12986 1120 aaKnown RBP16.85■□□□□ 0.29
HOXD3-202ENST00000410016 LRRC14Q15048 493 aa16.85■□□□□ 0.29
HOXD3-202ENST00000410016 DALRD3Q5D0E6 543 aaKnown RBP16.85■□□□□ 0.29
HOXD3-202ENST00000410016 USTQ9Y2C2 406 aa16.85■□□□□ 0.29
HOXD3-202ENST00000410016 TCRBV5S1A1TA0A578 114 aa16.84■□□□□ 0.29
HOXD3-202ENST00000410016 TMEM191CA6NGB0 347 aa16.84■□□□□ 0.29
HOXD3-202ENST00000410016 FAM189A1O60320 539 aa16.84■□□□□ 0.29
HOXD3-202ENST00000410016 SNX3O60493 162 aa16.84■□□□□ 0.29
HOXD3-202ENST00000410016 TMEM191BP0C7N4 346 aa16.84■□□□□ 0.29
HOXD3-202ENST00000410016 POTEJP0CG39 1038 aa16.84■□□□□ 0.29
HOXD3-202ENST00000410016 TGFB2P61812 414 aa16.84■□□□□ 0.29
HOXD3-202ENST00000410016 SF3A3Q12874 501 aaKnown RBP eCLIP16.84■□□□□ 0.29
HOXD3-202ENST00000410016 HIBCHQ6NVY1 386 aaPredicted RBP16.84■□□□□ 0.29
HOXD3-202ENST00000410016 ZNF365Q70YC5 407 aa16.84■□□□□ 0.29
HOXD3-202ENST00000410016 HOXC10Q9NYD6 342 aa16.84■□□□□ 0.29
HOXD3-202ENST00000410016 EURLQ9NYK6 297 aa16.84■□□□□ 0.29
HOXD3-202ENST00000410016 SAMD15Q9P1V8 674 aa16.84■□□□□ 0.29
HOXD3-202ENST00000410016 LGALS13Q9UHV8 139 aa16.84■□□□□ 0.29
HOXD3-202ENST00000410016 MYH9P35579 1960 aaKnown RBP16.84■□□□□ 0.29
HOXD3-202ENST00000410016 GSTTP1A0A1W2PQM5 241 aa16.84■□□□□ 0.29
HOXD3-202ENST00000410016 ATP2C2O75185 946 aa16.84■□□□□ 0.29
HOXD3-202ENST00000410016 ASS1P00966 412 aaKnown RBP16.84■□□□□ 0.29
HOXD3-202ENST00000410016 OAS1P00973 400 aaKnown RBP16.84■□□□□ 0.29
HOXD3-202ENST00000410016 ATP5DP30049 168 aa16.84■□□□□ 0.29
HOXD3-202ENST00000410016 ZNF252P-AS1Q0IIN9 211 aa16.84■□□□□ 0.29
HOXD3-202ENST00000410016 CAPSQ13938 189 aa16.84■□□□□ 0.29
HOXD3-202ENST00000410016 TMEM63BQ5T3F8 832 aa16.84■□□□□ 0.29
HOXD3-202ENST00000410016 PPP1R2P3Q6NXS1 205 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms