RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 GRIN1Q05586 938 aa17.67■□□□□ 0.42
PCDHA13-202ENST00000409494 RBBP5Q15291 538 aaKnown RBP17.67■□□□□ 0.42
PCDHA13-202ENST00000409494 VSIG10LQ86VR7 867 aa17.67■□□□□ 0.42
PCDHA13-202ENST00000409494 ZNF512Q96ME7 567 aaPredicted RBP17.67■□□□□ 0.42
PCDHA13-202ENST00000409494 HAUS8Q9BT25 410 aa17.67■□□□□ 0.42
PCDHA13-202ENST00000409494 A1CFQ9NQ94 594 aaKnown RBP17.67■□□□□ 0.42
PCDHA13-202ENST00000409494 NFASCO94856 1347 aa17.67■□□□□ 0.42
PCDHA13-202ENST00000409494 PHLPP1O60346 1717 aa17.67■□□□□ 0.42
PCDHA13-202ENST00000409494 SLC9A1P19634 815 aa17.67■□□□□ 0.42
PCDHA13-202ENST00000409494 TMEM62Q0P6H9 643 aa17.67■□□□□ 0.42
PCDHA13-202ENST00000409494 MMEL1Q495T6 779 aa17.67■□□□□ 0.42
PCDHA13-202ENST00000409494 IL17RAQ96F46 866 aa17.67■□□□□ 0.42
PCDHA13-202ENST00000409494 TAF1DQ9H5J8 278 aaPredicted RBP17.67■□□□□ 0.42
PCDHA13-202ENST00000409494 THP07101 528 aa17.67■□□□□ 0.42
PCDHA13-202ENST00000409494 CLCN3P51790 818 aa17.67■□□□□ 0.42
PCDHA13-202ENST00000409494 ACVR2BQ13705 512 aa17.67■□□□□ 0.42
PCDHA13-202ENST00000409494 MAGED2Q9UNF1 606 aaPredicted RBP17.67■□□□□ 0.42
PCDHA13-202ENST00000409494 MOCS2O96007 188 aaPredicted RBP17.67■□□□□ 0.42
PCDHA13-202ENST00000409494 GPD1P21695 349 aa17.67■□□□□ 0.42
PCDHA13-202ENST00000409494 PDK1Q15118 436 aa17.67■□□□□ 0.42
PCDHA13-202ENST00000409494 TDRD10Q5VZ19 366 aaKnown RBP17.67■□□□□ 0.42
PCDHA13-202ENST00000409494 RGMBQ6NW40 437 aa17.67■□□□□ 0.42
PCDHA13-202ENST00000409494 TTC8Q8TAM2 541 aa17.67■□□□□ 0.42
PCDHA13-202ENST00000409494 KLHL29Q96CT2 875 aa17.67■□□□□ 0.42
PCDHA13-202ENST00000409494 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.67■□□□□ 0.42
PCDHA13-202ENST00000409494 C3orf70A6NLC5 250 aaPredicted RBP17.66■□□□□ 0.42
PCDHA13-202ENST00000409494 MUM1Q2TAK8 710 aa17.66■□□□□ 0.42
PCDHA13-202ENST00000409494 PID1Q7Z2X4 250 aa17.66■□□□□ 0.42
PCDHA13-202ENST00000409494 ITGA11Q9UKX5 1188 aa17.66■□□□□ 0.42
PCDHA13-202ENST00000409494 LSM8O95777 96 aaKnown RBP17.66■□□□□ 0.42
PCDHA13-202ENST00000409494 INSRRP14616 1297 aa17.66■□□□□ 0.42
PCDHA13-202ENST00000409494 EIF3EP60228 445 aaKnown RBP17.66■□□□□ 0.42
PCDHA13-202ENST00000409494 SPARCL1Q14515 664 aa17.66■□□□□ 0.42
PCDHA13-202ENST00000409494 GRIK4Q16099 956 aa17.66■□□□□ 0.42
PCDHA13-202ENST00000409494 SLC35G2Q8TBE7 412 aa17.66■□□□□ 0.42
PCDHA13-202ENST00000409494 ZNF507Q8TCN5 953 aa17.66■□□□□ 0.42
PCDHA13-202ENST00000409494 MRPL9Q9BYD2 267 aaKnown RBP17.66■□□□□ 0.42
PCDHA13-202ENST00000409494 TRIM54Q9BYV2 358 aa17.66■□□□□ 0.42
PCDHA13-202ENST00000409494 ZC3H4Q9UPT8 1303 aaKnown RBP17.66■□□□□ 0.42
PCDHA13-202ENST00000409494 COPEO14579 308 aa17.66■□□□□ 0.42
PCDHA13-202ENST00000409494 BNIP3LO60238 219 aa17.66■□□□□ 0.42
PCDHA13-202ENST00000409494 UGP2Q16851 508 aa17.66■□□□□ 0.42
PCDHA13-202ENST00000409494 TMEM119Q4V9L6 283 aa17.66■□□□□ 0.42
PCDHA13-202ENST00000409494 MMS22LQ6ZRQ5 1243 aa17.66■□□□□ 0.42
PCDHA13-202ENST00000409494 FEZF2Q8TBJ5 459 aa17.66■□□□□ 0.42
PCDHA13-202ENST00000409494 TRAF3IP3Q9Y228 551 aa17.66■□□□□ 0.42
PCDHA13-202ENST00000409494 FRMPD4Q14CM0 1322 aa17.66■□□□□ 0.42
PCDHA13-202ENST00000409494 CYP3A7-CYP3A51PA0A087WV96 503 aa17.66■□□□□ 0.42
PCDHA13-202ENST00000409494 ITGB3P05106 788 aa17.66■□□□□ 0.42
PCDHA13-202ENST00000409494 CYP3A7P24462 503 aa17.66■□□□□ 0.42
PCDHA13-202ENST00000409494 PRAMEP78395 509 aa17.66■□□□□ 0.42
PCDHA13-202ENST00000409494 AP1B1Q10567 949 aa17.66■□□□□ 0.42
PCDHA13-202ENST00000409494 GPAT2Q6NUI2 795 aa17.66■□□□□ 0.42
PCDHA13-202ENST00000409494 MTHFD1LQ6UB35 978 aa17.66■□□□□ 0.42
PCDHA13-202ENST00000409494 AGPAT5Q9NUQ2 364 aa17.66■□□□□ 0.42
PCDHA13-202ENST00000409494 KRT33BQ14525 404 aa17.65■□□□□ 0.42
PCDHA13-202ENST00000409494 DBN1Q16643 649 aa17.65■□□□□ 0.42
PCDHA13-202ENST00000409494 TTI2Q6NXR4 508 aa17.65■□□□□ 0.42
PCDHA13-202ENST00000409494 SPAG6O75602 509 aa17.65■□□□□ 0.42
PCDHA13-202ENST00000409494 LAMTOR4Q0VGL1 99 aa17.65■□□□□ 0.42
PCDHA13-202ENST00000409494 GPS1Q13098 491 aa17.65■□□□□ 0.42
PCDHA13-202ENST00000409494 ACAD10Q6JQN1 1059 aa17.65■□□□□ 0.42
PCDHA13-202ENST00000409494 ATP6V0D2Q8N8Y2 350 aa17.65■□□□□ 0.42
PCDHA13-202ENST00000409494 KIF13AQ9H1H9 1805 aa17.65■□□□□ 0.42
PCDHA13-202ENST00000409494 GLTPD2A6NH11 291 aa17.65■□□□□ 0.42
PCDHA13-202ENST00000409494 ACKR2O00590 384 aa17.65■□□□□ 0.42
PCDHA13-202ENST00000409494 PDGFRBP09619 1106 aa17.65■□□□□ 0.42
PCDHA13-202ENST00000409494 TLK2Q86UE8 772 aa17.65■□□□□ 0.42
PCDHA13-202ENST00000409494 HOMEZQ8IX15 550 aa17.65■□□□□ 0.42
PCDHA13-202ENST00000409494 MCUQ8NE86 351 aa17.65■□□□□ 0.42
PCDHA13-202ENST00000409494 LRRC1Q9BTT6 524 aa17.65■□□□□ 0.42
PCDHA13-202ENST00000409494 SH3BP1Q9Y3L3 701 aa17.65■□□□□ 0.42
PCDHA13-202ENST00000409494 SLC4A1P02730 911 aa17.65■□□□□ 0.42
PCDHA13-202ENST00000409494 CDR2Q01850 454 aa17.65■□□□□ 0.42
PCDHA13-202ENST00000409494 SFSWAPQ12872 951 aaKnown RBP17.65■□□□□ 0.42
PCDHA13-202ENST00000409494 TMEM132BQ14DG7 1078 aa17.65■□□□□ 0.42
PCDHA13-202ENST00000409494 HIBCHQ6NVY1 386 aaPredicted RBP17.65■□□□□ 0.42
PCDHA13-202ENST00000409494 ANKRD23Q86SG2 305 aa17.65■□□□□ 0.42
PCDHA13-202ENST00000409494 USP13Q92995 863 aaPredicted RBP17.65■□□□□ 0.42
PCDHA13-202ENST00000409494 DDX47Q9H0S4 455 aaKnown RBP17.65■□□□□ 0.42
PCDHA13-202ENST00000409494 XPNPEP3Q9NQH7 507 aa17.65■□□□□ 0.42
PCDHA13-202ENST00000409494 HARS2P49590 506 aaKnown RBP17.64■□□□□ 0.41
PCDHA13-202ENST00000409494 TSTA3Q13630 321 aaPredicted RBP17.64■□□□□ 0.41
PCDHA13-202ENST00000409494 MGAT5BQ3V5L5 792 aa17.64■□□□□ 0.41
PCDHA13-202ENST00000409494 JADE1Q6IE81 842 aa17.64■□□□□ 0.41
PCDHA13-202ENST00000409494 TRIM65Q6PJ69 517 aa17.64■□□□□ 0.41
PCDHA13-202ENST00000409494 LRP10Q7Z4F1 713 aa17.64■□□□□ 0.41
PCDHA13-202ENST00000409494 WDR75Q8IWA0 830 aaKnown RBP17.64■□□□□ 0.41
PCDHA13-202ENST00000409494 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.64■□□□□ 0.41
PCDHA13-202ENST00000409494 AKAP12Q02952 1782 aa17.64■□□□□ 0.41
PCDHA13-202ENST00000409494 B3GAT3O94766 335 aa17.64■□□□□ 0.41
PCDHA13-202ENST00000409494 UPP2O95045 317 aa17.64■□□□□ 0.41
PCDHA13-202ENST00000409494 ITIH2P19823 946 aa17.64■□□□□ 0.41
PCDHA13-202ENST00000409494 PSEN2P49810 448 aa17.64■□□□□ 0.41
PCDHA13-202ENST00000409494 CENPCQ03188 943 aa17.64■□□□□ 0.41
PCDHA13-202ENST00000409494 ADCY1Q08828 1119 aa17.64■□□□□ 0.41
PCDHA13-202ENST00000409494 SLC30A10Q6XR72 485 aa17.64■□□□□ 0.41
PCDHA13-202ENST00000409494 RRN3Q9NYV6 651 aa17.64■□□□□ 0.41
PCDHA13-202ENST00000409494 MFSD10Q14728 455 aa17.64■□□□□ 0.41
PCDHA13-202ENST00000409494 STAT4Q14765 748 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms