RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 SLMAPQ14BN4 828 aa14.19□□□□□ -0.14
COL6A2-204ENST00000409416 LIN9Q5TKA1 542 aa14.19□□□□□ -0.14
COL6A2-204ENST00000409416 RBBP8NLQ8NC74 664 aaPredicted RBP14.19□□□□□ -0.14
COL6A2-204ENST00000409416 LMO3Q8TAP4 145 aa14.19□□□□□ -0.14
COL6A2-204ENST00000409416 SPATA33Q96N06 139 aa14.19□□□□□ -0.14
COL6A2-204ENST00000409416 EPB41L4BQ9H329 900 aa14.19□□□□□ -0.14
COL6A2-204ENST00000409416 PDGFCQ9NRA1 345 aa14.19□□□□□ -0.14
COL6A2-204ENST00000409416 HOMER3Q9NSC5 361 aa14.19□□□□□ -0.14
COL6A2-204ENST00000409416 TJP2Q9UDY2 1190 aa14.19□□□□□ -0.14
COL6A2-204ENST00000409416 TPX2Q9ULW0 747 aaKnown RBP14.19□□□□□ -0.14
COL6A2-204ENST00000409416 CNTNAP1P78357 1384 aa14.19□□□□□ -0.14
COL6A2-204ENST00000409416 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.19□□□□□ -0.14
COL6A2-204ENST00000409416 PIK3CDO00329 1044 aa14.19□□□□□ -0.14
COL6A2-204ENST00000409416 CETN2P41208 172 aa14.19□□□□□ -0.14
COL6A2-204ENST00000409416 ITGA8P53708 1063 aa14.19□□□□□ -0.14
COL6A2-204ENST00000409416 C6orf89Q6UWU4 347 aa14.19□□□□□ -0.14
COL6A2-204ENST00000409416 YTHDF3Q7Z739 585 aaKnown RBP14.19□□□□□ -0.14
COL6A2-204ENST00000409416 NLRP7Q8WX94 980 aa14.19□□□□□ -0.14
COL6A2-204ENST00000409416 DCPSQ96C86 337 aaKnown RBP14.19□□□□□ -0.14
COL6A2-204ENST00000409416 AS3MTQ9HBK9 375 aa14.19□□□□□ -0.14
COL6A2-204ENST00000409416 SLC38A10Q9HBR0 1119 aa14.19□□□□□ -0.14
COL6A2-204ENST00000409416 HES2Q9Y543 173 aa14.19□□□□□ -0.14
COL6A2-204ENST00000409416 HSPA6P17066 643 aa14.18□□□□□ -0.14
COL6A2-204ENST00000409416 ZNF131P52739 623 aa14.18□□□□□ -0.14
COL6A2-204ENST00000409416 NCOA4Q13772 614 aa14.18□□□□□ -0.14
COL6A2-204ENST00000409416 DNAJC24Q6P3W2 148 aa14.18□□□□□ -0.14
COL6A2-204ENST00000409416 RFX8Q6ZV50 586 aa14.18□□□□□ -0.14
COL6A2-204ENST00000409416 OLIG1Q8TAK6 271 aa14.18□□□□□ -0.14
COL6A2-204ENST00000409416 RNF217Q8TC41 542 aa14.18□□□□□ -0.14
COL6A2-204ENST00000409416 TLCD1Q96CP7 247 aa14.18□□□□□ -0.14
COL6A2-204ENST00000409416 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.18□□□□□ -0.14
COL6A2-204ENST00000409416 ZNF541Q9H0D2 1346 aa14.18□□□□□ -0.14
COL6A2-204ENST00000409416 GAS8O95995 478 aa14.18□□□□□ -0.14
COL6A2-204ENST00000409416 CST3P01034 146 aaPredicted RBP14.18□□□□□ -0.14
COL6A2-204ENST00000409416 GH1P01241 217 aa14.18□□□□□ -0.14
COL6A2-204ENST00000409416 BRAFP15056 766 aa14.18□□□□□ -0.14
COL6A2-204ENST00000409416 PTPRAP18433 802 aa14.18□□□□□ -0.14
COL6A2-204ENST00000409416 PHKA2P46019 1235 aa14.18□□□□□ -0.14
COL6A2-204ENST00000409416 GPS1Q13098 491 aa14.18□□□□□ -0.14
COL6A2-204ENST00000409416 AUHQ13825 339 aaKnown RBP14.18□□□□□ -0.14
COL6A2-204ENST00000409416 EML3Q32P44 896 aa14.18□□□□□ -0.14
COL6A2-204ENST00000409416 C11orf63Q6NUN7 778 aa14.18□□□□□ -0.14
COL6A2-204ENST00000409416 TMEM161BQ8NDZ6 487 aa14.18□□□□□ -0.14
COL6A2-204ENST00000409416 N4BP2L2Q92802 583 aaPredicted RBP14.18□□□□□ -0.14
COL6A2-204ENST00000409416 SGSM3Q96HU1 749 aa14.18□□□□□ -0.14
COL6A2-204ENST00000409416 HEXIM2Q96MH2 286 aaKnown RBP14.18□□□□□ -0.14
COL6A2-204ENST00000409416 KLK14Q9P0G3 267 aa14.18□□□□□ -0.14
COL6A2-204ENST00000409416 PFASO15067 1338 aa14.18□□□□□ -0.14
COL6A2-204ENST00000409416 AGTP01019 485 aa14.18□□□□□ -0.14
COL6A2-204ENST00000409416 ZNF286BP0CG31 522 aa14.18□□□□□ -0.14
COL6A2-204ENST00000409416 CALRP27797 417 aaKnown RBP14.18□□□□□ -0.14
COL6A2-204ENST00000409416 YARSP54577 528 aaKnown RBP14.18□□□□□ -0.14
COL6A2-204ENST00000409416 KCTD2Q14681 263 aa14.18□□□□□ -0.14
COL6A2-204ENST00000409416 BTNL9Q6UXG8 535 aa14.18□□□□□ -0.14
COL6A2-204ENST00000409416 F8VP50 259 aa14.17□□□□□ -0.14
COL6A2-204ENST00000409416 IRF6O14896 467 aa14.17□□□□□ -0.14
COL6A2-204ENST00000409416 PDGFRBP09619 1106 aa14.17□□□□□ -0.14
COL6A2-204ENST00000409416 HSDL1Q3SXM5 330 aa14.17□□□□□ -0.14
COL6A2-204ENST00000409416 CASC4Q6P4E1 433 aa14.17□□□□□ -0.14
COL6A2-204ENST00000409416 C1orf228Q6PIY5 440 aa14.17□□□□□ -0.14
COL6A2-204ENST00000409416 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.17□□□□□ -0.14
COL6A2-204ENST00000409416 NKIRAS1Q9NYS0 192 aa14.17□□□□□ -0.14
COL6A2-204ENST00000409416 SEPT10Q9P0V9 454 aa14.17□□□□□ -0.14
COL6A2-204ENST00000409416 NR2E3Q9Y5X4 410 aa14.17□□□□□ -0.14
COL6A2-204ENST00000409416 KLRG2A4D1S0 409 aaPredicted RBP14.17□□□□□ -0.14
COL6A2-204ENST00000409416 UBOX5O94941 541 aa14.17□□□□□ -0.14
COL6A2-204ENST00000409416 OR6B2Q6IFH4 312 aa14.17□□□□□ -0.14
COL6A2-204ENST00000409416 ZNF449Q6P9G9 518 aa14.17□□□□□ -0.14
COL6A2-204ENST00000409416 TRPM8Q7Z2W7 1104 aa14.17□□□□□ -0.14
COL6A2-204ENST00000409416 ARMC9Q7Z3E5 817 aa14.17□□□□□ -0.14
COL6A2-204ENST00000409416 EXOC3L1Q86VI1 746 aa14.17□□□□□ -0.14
COL6A2-204ENST00000409416 SYT11Q9BT88 431 aa14.17□□□□□ -0.14
COL6A2-204ENST00000409416 TMEM121Q9BTD3 319 aa14.17□□□□□ -0.14
COL6A2-204ENST00000409416 MYO9BQ13459 2157 aa14.17□□□□□ -0.14
COL6A2-204ENST00000409416 CITO14578 2027 aa14.17□□□□□ -0.14
COL6A2-204ENST00000409416 LAMA2P24043 3122 aaKnown RBP14.16□□□□□ -0.14
COL6A2-204ENST00000409416 TXNP10599 105 aaKnown RBP14.16□□□□□ -0.14
COL6A2-204ENST00000409416 JAK3P52333 1124 aa14.16□□□□□ -0.14
COL6A2-204ENST00000409416 RABGGTBP53611 331 aa14.16□□□□□ -0.14
COL6A2-204ENST00000409416 GPAT2Q6NUI2 795 aa14.16□□□□□ -0.14
COL6A2-204ENST00000409416 RFX6Q8HWS3 928 aa14.16□□□□□ -0.14
COL6A2-204ENST00000409416 FAM149B1Q96BN6 582 aa14.16□□□□□ -0.14
COL6A2-204ENST00000409416 CEP41Q9BYV8 373 aa14.16□□□□□ -0.14
COL6A2-204ENST00000409416 TRIM6Q9C030 488 aaPredicted RBP14.16□□□□□ -0.14
COL6A2-204ENST00000409416 DONSONQ9NYP3 566 aa14.16□□□□□ -0.14
COL6A2-204ENST00000409416 SLX4Q8IY92 1834 aa14.16□□□□□ -0.14
COL6A2-204ENST00000409416 NFKBIEO00221 500 aa14.16□□□□□ -0.14
COL6A2-204ENST00000409416 DHX15O43143 795 aaKnown RBP14.16□□□□□ -0.14
COL6A2-204ENST00000409416 CXCL8P10145 99 aa14.16□□□□□ -0.14
COL6A2-204ENST00000409416 RARGP13631 454 aa14.16□□□□□ -0.14
COL6A2-204ENST00000409416 SAT1P21673 171 aa14.16□□□□□ -0.14
COL6A2-204ENST00000409416 PEX5P50542 639 aa14.16□□□□□ -0.14
COL6A2-204ENST00000409416 NAA25Q14CX7 972 aa14.16□□□□□ -0.14
COL6A2-204ENST00000409416 CLUL1Q15846 466 aa14.16□□□□□ -0.14
COL6A2-204ENST00000409416 ZNF699Q32M78 642 aa14.16□□□□□ -0.14
COL6A2-204ENST00000409416 P3H1Q32P28 736 aa14.16□□□□□ -0.14
COL6A2-204ENST00000409416 C1orf220Q5T0J3 134 aa14.16□□□□□ -0.14
COL6A2-204ENST00000409416 CCT6BQ92526 530 aa14.16□□□□□ -0.14
COL6A2-204ENST00000409416 RUNDC3BQ96NL0 473 aa14.16□□□□□ -0.14
COL6A2-204ENST00000409416 NOCTQ9UK39 431 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms