RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 EDRF1Q3B7T1 1238 aa13.51□□□□□ -0.25
HERC3-203ENST00000407637 ANKRD20A4Q4UJ75 823 aa13.51□□□□□ -0.25
HERC3-203ENST00000407637 TRIM50Q86XT4 487 aa13.51□□□□□ -0.25
HERC3-203ENST00000407637 RIN3Q8TB24 985 aa13.51□□□□□ -0.25
HERC3-203ENST00000407637 FAM172AQ8WUF8 416 aa13.51□□□□□ -0.25
HERC3-203ENST00000407637 BTBD6Q96KE9 485 aa13.51□□□□□ -0.25
HERC3-203ENST00000407637 TYW1Q9NV66 732 aaKnown RBP13.51□□□□□ -0.25
HERC3-203ENST00000407637 TMEM260Q9NX78 707 aa13.51□□□□□ -0.25
HERC3-203ENST00000407637 SLAIN2Q9P270 581 aa13.51□□□□□ -0.25
HERC3-203ENST00000407637 TELO2Q9Y4R8 837 aa13.51□□□□□ -0.25
HERC3-203ENST00000407637 FRMPD4Q14CM0 1322 aa13.51□□□□□ -0.25
HERC3-203ENST00000407637 TYROBPO43914 113 aa13.51□□□□□ -0.25
HERC3-203ENST00000407637 ADAMTS2O95450 1211 aa13.51□□□□□ -0.25
HERC3-203ENST00000407637 ATP6V1B1P15313 513 aa13.51□□□□□ -0.25
HERC3-203ENST00000407637 KCNA6P17658 529 aa13.51□□□□□ -0.25
HERC3-203ENST00000407637 SLC5A2P31639 672 aa13.51□□□□□ -0.25
HERC3-203ENST00000407637 CASP4P49662 377 aa13.51□□□□□ -0.25
HERC3-203ENST00000407637 PTK6Q13882 451 aa13.51□□□□□ -0.25
HERC3-203ENST00000407637 ZNF362Q5T0B9 420 aaPredicted RBP13.51□□□□□ -0.25
HERC3-203ENST00000407637 PATL1Q86TB9 770 aaKnown RBP13.51□□□□□ -0.25
HERC3-203ENST00000407637 GJA10Q969M2 543 aa13.51□□□□□ -0.25
HERC3-203ENST00000407637 NMUR2Q9GZQ4 415 aa13.51□□□□□ -0.25
HERC3-203ENST00000407637 COL1A1P02452 1464 aaPredicted RBP13.51□□□□□ -0.25
HERC3-203ENST00000407637 SMCO2A6NFE2 343 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 NDC80O14777 642 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 SORBS3O60504 671 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 PSMD7P51665 324 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 GEMIN4P57678 1058 aaKnown RBP13.5□□□□□ -0.25
HERC3-203ENST00000407637 MAP7D1Q3KQU3 841 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 TMCO4Q5TGY1 634 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 RNF111Q6ZNA4 994 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 NLRX1Q86UT6 975 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 ALYREFQ86V81 257 aaKnown RBP13.5□□□□□ -0.25
HERC3-203ENST00000407637 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.5□□□□□ -0.25
HERC3-203ENST00000407637 SLC35C1Q96A29 364 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 MTBPQ96DY7 904 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 BRIP1Q9BX63 1249 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 MAK16Q9BXY0 300 aaKnown RBP13.5□□□□□ -0.25
HERC3-203ENST00000407637 KLHL4Q9C0H6 718 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 ANKRD2Q9GZV1 360 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 KCNK13Q9HB14 408 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 UBAP1Q9NZ09 502 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 DMTF1Q9Y222 760 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 TMED5Q9Y3A6 229 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 NEU2Q9Y3R4 380 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 UBR2Q8IWV8 1755 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 KANSL1LA0AUZ9 987 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 BIRC5O15392 142 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 SPOPO43791 374 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 STRNO43815 780 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 DKC1O60832 514 aaKnown RBP eCLIP13.5□□□□□ -0.25
HERC3-203ENST00000407637 TM7SF2O76062 418 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 GOLGA8HP0CJ92 632 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 PCP11498 1178 aaKnown RBP13.5□□□□□ -0.25
HERC3-203ENST00000407637 PLS3P13797 630 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 GYS1P13807 737 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 SMARCA1P28370 1054 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 SLC18A1P54219 525 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 PPIDQ08752 370 aaKnown RBP13.5□□□□□ -0.25
HERC3-203ENST00000407637 RASA2Q15283 850 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 HP1BP3Q5SSJ5 553 aaPredicted RBP13.5□□□□□ -0.25
HERC3-203ENST00000407637 PPP4R3CPQ6ZMV5 832 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 TMPRSS6Q8IU80 811 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 DEPTORQ8TB45 409 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 DQX1Q8TE96 717 aaKnown RBP13.5□□□□□ -0.25
HERC3-203ENST00000407637 GDPD5Q8WTR4 605 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 SLCO2A1Q92959 643 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 GPAMQ9HCL2 828 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 ADAMTS6Q9UKP5 1117 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 STX8Q9UNK0 236 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 FAF1Q9UNN5 650 aaPredicted RBP13.5□□□□□ -0.25
HERC3-203ENST00000407637 PLA2G4CQ9UP65 541 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 HEMK1Q9Y5R4 338 aaPredicted RBP13.5□□□□□ -0.25
HERC3-203ENST00000407637 CACNA1SQ13698 1873 aa13.5□□□□□ -0.25
HERC3-203ENST00000407637 DCCP43146 1447 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 E9PBE3 544 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 E9PMD0 336 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 SERPINB7O75635 380 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 POLD1P28340 1107 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 GRM4Q14833 912 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 BBS5Q8N3I7 341 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 GSTCDQ8NEC7 633 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 SLC20A1Q8WUM9 679 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 CD101Q93033 1021 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 OXNAD1Q96HP4 312 aaPredicted RBP13.49□□□□□ -0.25
HERC3-203ENST00000407637 AGAP3Q96P47 875 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 MPHOSPH6Q99547 160 aaKnown RBP13.49□□□□□ -0.25
HERC3-203ENST00000407637 GPR88Q9GZN0 384 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 S100A14Q9HCY8 104 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 BMP2KQ9NSY1 1161 aaPredicted RBP13.49□□□□□ -0.25
HERC3-203ENST00000407637 DNAJC12Q9UKB3 198 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 ZNF148Q9UQR1 794 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 MROH5Q6ZUA9 1318 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 MYOCOSA0A1B0GUC4 107 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 LSM1O15116 133 aaKnown RBP13.49□□□□□ -0.25
HERC3-203ENST00000407637 CYP26A1O43174 497 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 TRMUO75648 421 aaKnown RBP13.49□□□□□ -0.25
HERC3-203ENST00000407637 KRT4P19013 534 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 MAGEA4P43358 317 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 ARL4CP56559 192 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms