RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 MTMR12Q9C0I1 747 aa13.42□□□□□ -0.26
PPP4R1-202ENST00000400555 DEFB129Q9H1M3 183 aa13.42□□□□□ -0.26
PPP4R1-202ENST00000400555 MRPL47Q9HD33 250 aaKnown RBP13.42□□□□□ -0.26
PPP4R1-202ENST00000400555 ZNRF3Q9ULT6 936 aa13.42□□□□□ -0.26
PPP4R1-202ENST00000400555 MAST2Q6P0Q8 1798 aa13.42□□□□□ -0.26
PPP4R1-202ENST00000400555 ZBTB7AO95365 584 aa13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 HSD17B4P51659 736 aa13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 HIRAP54198 1017 aaPredicted RBP13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 BPIFB4P59827 614 aa13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 GNPTABQ3T906 1256 aa13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 ACCSLQ4AC99 568 aa13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 RFX8Q6ZV50 586 aa13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 CROCCP2Q86T23 111 aa13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 TRIM50Q86XT4 487 aa13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 PALM2Q8IXS6 379 aa13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 MCPH1Q8NEM0 835 aa13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 TMEM237Q96Q45 408 aa13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 FAM167BQ9BTA0 163 aa13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 GINM1Q9NU53 330 aa13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 IKBKGQ9Y6K9 419 aa13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 COL5A3P25940 1745 aaPredicted RBP13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 MROH7Q68CQ1 1323 aa13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 DGAT1O75907 488 aa13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 CETPP11597 493 aa13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 TNFSF9P41273 254 aa13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 IL9RQ01113 521 aa13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 NFX1Q12986 1120 aaKnown RBP13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 CUL2Q13617 745 aa13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 TXNRD3NBQ6F5E7 133 aa13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 ARHGEF18Q6ZSZ5 1173 aa13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 ERICH1Q86X53 443 aa13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 LRRC8CQ8TDW0 803 aa13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 MAIP1Q8WWC4 291 aa13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 ZNF317Q96PQ6 595 aaPredicted RBP13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 SMC6Q96SB8 1091 aa13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 SLC38A10Q9HBR0 1119 aa13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 NUB1Q9Y5A7 615 aa13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 GJB1P08034 283 aa13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 TMEM191BP0C7N4 346 aa13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 RAP1GAPP47736 663 aa13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 GPC3P51654 580 aa13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 ELF3P78545 371 aaPredicted RBP13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 RNASELQ05823 741 aaKnown RBP13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 PKN2Q16513 984 aaKnown RBP13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 VTI1AQ96AJ9 217 aa13.41□□□□□ -0.26
PPP4R1-202ENST00000400555 SNX3O60493 162 aa13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 DIAPH2O60879 1101 aa13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 PSMA2P25787 234 aa13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 TARSP26639 723 aaKnown RBP13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 IRX4P78413 519 aa13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 GPAT2Q6NUI2 795 aa13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 MIS18BP1Q6P0N0 1132 aa13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 ERP27Q96DN0 273 aa13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 TRABDQ9H4I3 376 aa13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 ZNF302Q9NR11 478 aa13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 PTPRJQ12913 1337 aa13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 VWA5AO00534 786 aa13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 SKAP2O75563 359 aaPredicted RBP13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 PROSCO94903 275 aa13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 MAPTP10636 758 aaKnown RBP13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 PECAM1P16284 738 aaPredicted RBP13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 DRG2P55039 364 aaKnown RBP13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 MYL6P60660 151 aa13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 FSTL1Q12841 308 aa13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 NEDD9Q14511 834 aa13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 YTHDF3Q7Z739 585 aaKnown RBP13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 ASAP3Q8TDY4 903 aa13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 NCAPGQ9BPX3 1015 aa13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 XPNPEP1Q9NQW7 623 aa13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 AAASQ9NRG9 546 aa13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 ANKEF1Q9NU02 776 aa13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 RNF19AQ9NV58 838 aa13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 A0A0G2JND7 137 aa13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 FSCN2O14926 492 aa13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 CST3P01034 146 aaPredicted RBP13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 SSTR1P30872 391 aa13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 GCLCP48506 637 aaPredicted RBP13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 CDH8P55286 799 aa13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 RFX6Q8HWS3 928 aa13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 SEC14L1Q92503 715 aa13.4□□□□□ -0.26
PPP4R1-202ENST00000400555 NOP56O00567 594 aaKnown RBP13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 CDH16O75309 829 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 STAM2O75886 525 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 NCKAP1LP55160 1127 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 YWHAGP61981 247 aaKnown RBP eCLIP13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 MAMLD1Q13495 774 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 BSPRYQ5W0U4 402 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 RHPN2Q8IUC4 686 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 MICALL2Q8IY33 904 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 RTKN2Q8IZC4 609 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 MORC4Q8TE76 937 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 FBF1Q8TES7 1133 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 ZNF526Q8TF50 670 aaPredicted RBP13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 PYROXD1Q8WU10 500 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 ZNF606Q8WXB4 792 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 RMDN2Q96LZ7 410 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 CXorf56Q9H5V9 222 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 LRRC19Q9H756 370 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 APOBEC3GQ9HC16 384 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms