RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 NELFBQ8WX92 580 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 RAPGEF4Q8WZA2 1011 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 INPP5DQ92835 1189 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 CYFIP2Q96F07 1278 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 CEP295NLQ96MC4 621 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 NSMCE3Q96MG7 304 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 GPR20Q99678 358 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 FTOQ9C0B1 505 aaKnown RBP eCLIP3.83□□□□□ -1.8
XRCC4-203ENST00000396027 ANKRD2Q9GZV1 360 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 INTS2Q9H0H0 1204 aaKnown RBP3.83□□□□□ -1.8
XRCC4-203ENST00000396027 KLHL25Q9H0H3 589 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 CDH19Q9H159 772 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 XYLT2Q9H1B5 865 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 NDST4Q9H3R1 872 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 SOX17Q9H6I2 414 aaPredicted RBP3.83□□□□□ -1.8
XRCC4-203ENST00000396027 RNPEPL1Q9HAU8 725 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 PRDM7Q9NQW5 492 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 FAM114A2Q9NRY5 505 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 TBC1D23Q9NUY8 699 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 HAUS2Q9NVX0 235 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 HYPKQ9NX55 129 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 KCTD5Q9NXV2 234 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 SEPT3Q9UH03 358 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 VANGL2Q9ULK5 521 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.83□□□□□ -1.8
XRCC4-203ENST00000396027 CDC42BPAQ5VT25 1732 aa3.83□□□□□ -1.8
XRCC4-203ENST00000396027 MBD5Q9P267 1494 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 CCDC163A0A0D9SF12 145 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 TEX51A0A1B0GUA7 166 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 TRIM64A6NGJ6 449 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 TRIM64BA6NI03 449 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 OR6C65A6NJZ3 312 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 F8W810 466 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 H3BNX3 289 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 BOLA2-SMG1P6H3BVE0 249 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 ZNF701M0R085 212 aaPredicted RBP3.82□□□□□ -1.8
XRCC4-203ENST00000396027 AP3B1O00203 1094 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 FBP2O00757 339 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 TRDMT1O14717 391 aaKnown RBP3.82□□□□□ -1.8
XRCC4-203ENST00000396027 ORC4O43929 436 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 ZNF862O60290 1169 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 RANBP6O60518 1105 aaKnown RBP3.82□□□□□ -1.8
XRCC4-203ENST00000396027 CNOT3O75175 753 aaKnown RBP3.82□□□□□ -1.8
XRCC4-203ENST00000396027 PDE5AO76074 875 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 UFL1O94874 794 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 FBXO21O94952 628 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 TJP3O95049 919 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 ZNF202O95125 648 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 KRT7P08729 469 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 PIM1P11309 404 aaPredicted RBP3.82□□□□□ -1.8
XRCC4-203ENST00000396027 NQO1P15559 274 aaKnown RBP3.82□□□□□ -1.8
XRCC4-203ENST00000396027 PCSK2P16519 638 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 POLR2CP19387 275 aaPredicted RBP3.82□□□□□ -1.8
XRCC4-203ENST00000396027 NR1D1P20393 614 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 PRKACBP22694 351 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 LRPAP1P30533 357 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 PRKAR2BP31323 418 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 GPD2P43304 727 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 CBX5P45973 191 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 ASMTP46597 345 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 PTDSS1P48651 473 aaKnown RBP3.82□□□□□ -1.8
XRCC4-203ENST00000396027 NEK4P51957 841 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 HNRNPFP52597 415 aaKnown RBP3.82□□□□□ -1.8
XRCC4-203ENST00000396027 STAT2P52630 851 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 ATP2B2Q01814 1243 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 CDR2Q01850 454 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 MCL1Q07820 350 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 BNIP1Q12981 228 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 ITGB3BPQ13352 177 aaPredicted RBP3.82□□□□□ -1.8
XRCC4-203ENST00000396027 SEMA3AQ14563 771 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 PSMD6Q15008 389 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 BBS9Q3SYG4 887 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 LIN52Q52LA3 116 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 CAVIN4Q5BKX8 364 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 C6orf10Q5SRN2 563 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 HYIQ5T013 277 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 AGBL2Q5U5Z8 902 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 C12orf60Q5U649 245 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 IQSEC1Q6DN90 963 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 SIGIRRQ6IA17 410 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 FAM122CQ6P4D5 195 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 SLC2A7Q6PXP3 512 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 CCNI2Q6ZMN8 369 aaPredicted RBP3.82□□□□□ -1.8
XRCC4-203ENST00000396027 IDO2Q6ZQW0 420 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 CCDC129Q6ZRS4 1044 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 ZNF572Q7Z3I7 529 aaPredicted RBP3.82□□□□□ -1.8
XRCC4-203ENST00000396027 RALYLQ86SE5 291 aaKnown RBP3.82□□□□□ -1.8
XRCC4-203ENST00000396027 PNMA8AQ86V59 439 aaPredicted RBP3.82□□□□□ -1.8
XRCC4-203ENST00000396027 CNGA4Q8IV77 575 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 PALM2Q8IXS6 379 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 TCP11L2Q8N4U5 519 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 AFAP1L2Q8N4X5 818 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 ATP6V0D2Q8N8Y2 350 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 USP38Q8NB14 1042 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 MDM1Q8TC05 714 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 SGCDQ92629 289 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 PEX13Q92968 403 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 SGK3Q96BR1 496 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 DHX58Q96C10 678 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 NUDT16Q96DE0 195 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms