RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 RMDN3Q96TC7 470 aa6.02□□□□□ -1.45
HMGB1P10-201ENST00000395823 CHST8Q9H2A9 424 aa6.02□□□□□ -1.45
HMGB1P10-201ENST00000395823 BRD9Q9H8M2 597 aa6.02□□□□□ -1.45
HMGB1P10-201ENST00000395823 CFAP97Q9P2B7 532 aa6.02□□□□□ -1.45
HMGB1P10-201ENST00000395823 MAGED2Q9UNF1 606 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P10-201ENST00000395823 GTF2A1LQ9UNN4 478 aa6.02□□□□□ -1.45
HMGB1P10-201ENST00000395823 MAN2B2Q9Y2E5 1009 aa6.02□□□□□ -1.45
HMGB1P10-201ENST00000395823 ZDHHC9Q9Y397 364 aa6.02□□□□□ -1.45
HMGB1P10-201ENST00000395823 NR2E1Q9Y466 385 aa6.02□□□□□ -1.45
HMGB1P10-201ENST00000395823 UBE2QL1A1L167 161 aa6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 ZNF785A8K8V0 405 aa6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 PYCARD-AS1I3L0S3 204 aa6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 M0R3H8 397 aa6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 TBC1D4O60343 1298 aa6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 GNAI3P08754 354 aa6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 CD53P19397 219 aa6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 SLC11A2P49281 568 aa6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 NPEPPSP55786 919 aa6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 UCP3P55916 312 aa6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 PSMC1P62191 440 aaKnown RBP6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 GNAI1P63096 354 aa6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 RIN1Q13671 783 aa6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 ATP2B3Q16720 1220 aa6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 PFKFB4Q16877 469 aa6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 ALFQ53S48 1182 aa6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 PRR16Q569H4 304 aa6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 DCAF12L1Q5VU92 463 aa6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 RRAGBQ5VZM2 374 aa6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 CATSPERGQ6ZRH7 1159 aa6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 ZNF761Q86XN6 746 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 PDSS2Q86YH6 399 aa6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 GPR135Q8IZ08 494 aa6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 DNAJC5GQ8N7S2 189 aa6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 TP53I13Q8NBR0 393 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 DACT3Q96B18 629 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 TBC1D20Q96BZ9 403 aa6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 NAP1L4Q99733 375 aaKnown RBP6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 TMEM120AQ9BXJ8 343 aa6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 TINAGL1Q9GZM7 467 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 MAGEH1Q9H213 219 aa6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 OBP2BQ9NPH6 170 aa6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 SERHLQ9NQF3 203 aa6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 MRPS18AQ9NVS2 196 aaKnown RBP6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 C9orf78Q9NZ63 289 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 RGS17Q9UGC6 210 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 CEP83Q9Y592 693 aa6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 SLC4A7Q9Y6M7 1214 aa6.01□□□□□ -1.45
HMGB1P10-201ENST00000395823 PMS2P1A4D2B8 440 aa6□□□□□ -1.45
HMGB1P10-201ENST00000395823 MBD3L4A6NDZ8 208 aaPredicted RBP6□□□□□ -1.45
HMGB1P10-201ENST00000395823 MBD3L3A6NE82 208 aaPredicted RBP6□□□□□ -1.45
HMGB1P10-201ENST00000395823 GOLGA6L3A6NEY3 463 aa6□□□□□ -1.45
HMGB1P10-201ENST00000395823 AQP12BA6NM10 295 aa6□□□□□ -1.45
HMGB1P10-201ENST00000395823 LGALS16A8MUM7 142 aa6□□□□□ -1.45
HMGB1P10-201ENST00000395823 E9PLN8 166 aa6□□□□□ -1.45
HMGB1P10-201ENST00000395823 ACKR2O00590 384 aa6□□□□□ -1.45
HMGB1P10-201ENST00000395823 NPC1O15118 1278 aa6□□□□□ -1.45
HMGB1P10-201ENST00000395823 PJA2O43164 708 aa6□□□□□ -1.45
HMGB1P10-201ENST00000395823 HOXA3O43365 443 aaPredicted RBP6□□□□□ -1.45
HMGB1P10-201ENST00000395823 SKAP2O75563 359 aaPredicted RBP6□□□□□ -1.45
HMGB1P10-201ENST00000395823 HAUS5O94927 633 aa6□□□□□ -1.45
HMGB1P10-201ENST00000395823 NDST3O95803 873 aa6□□□□□ -1.45
HMGB1P10-201ENST00000395823 SNRPA1P09661 255 aaKnown RBP6□□□□□ -1.45
HMGB1P10-201ENST00000395823 SLC6A2P23975 617 aa6□□□□□ -1.45
HMGB1P10-201ENST00000395823 KLRC1P26715 233 aa6□□□□□ -1.45
HMGB1P10-201ENST00000395823 CARSP49589 748 aaKnown RBP6□□□□□ -1.45
HMGB1P10-201ENST00000395823 ZNF135P52742 658 aaPredicted RBP6□□□□□ -1.45
HMGB1P10-201ENST00000395823 PTTG1IPP53801 180 aa6□□□□□ -1.45
HMGB1P10-201ENST00000395823 CLRN1P58418 232 aa6□□□□□ -1.45
HMGB1P10-201ENST00000395823 PTH1RQ03431 593 aa6□□□□□ -1.45
HMGB1P10-201ENST00000395823 ZACNQ401N2 412 aa6□□□□□ -1.45
HMGB1P10-201ENST00000395823 ZFYVE27Q5T4F4 411 aa6□□□□□ -1.45
HMGB1P10-201ENST00000395823 LMBRD2Q68DH5 695 aaPredicted RBP6□□□□□ -1.45
HMGB1P10-201ENST00000395823 BEND5Q7L4P6 421 aa6□□□□□ -1.45
HMGB1P10-201ENST00000395823 XYLT1Q86Y38 959 aa6□□□□□ -1.45
HMGB1P10-201ENST00000395823 SUGP1Q8IWZ8 645 aaKnown RBP6□□□□□ -1.45
HMGB1P10-201ENST00000395823 SLC15A4Q8N697 577 aa6□□□□□ -1.45
HMGB1P10-201ENST00000395823 TMIEQ8NEW7 156 aa6□□□□□ -1.45
HMGB1P10-201ENST00000395823 CYP2W1Q8TAV3 490 aa6□□□□□ -1.45
HMGB1P10-201ENST00000395823 MUL1Q969V5 352 aa6□□□□□ -1.45
HMGB1P10-201ENST00000395823 LCORQ96JN0 433 aaPredicted RBP6□□□□□ -1.45
HMGB1P10-201ENST00000395823 NELL2Q99435 816 aa6□□□□□ -1.45
HMGB1P10-201ENST00000395823 VKORC1Q9BQB6 163 aa6□□□□□ -1.45
HMGB1P10-201ENST00000395823 HEPHQ9BQS7 1158 aa6□□□□□ -1.45
HMGB1P10-201ENST00000395823 LSM14BQ9BX40 385 aaKnown RBP6□□□□□ -1.45
HMGB1P10-201ENST00000395823 A1CFQ9NQ94 594 aaKnown RBP6□□□□□ -1.45
HMGB1P10-201ENST00000395823 KCTD3Q9Y597 815 aa6□□□□□ -1.45
HMGB1P10-201ENST00000395823 FAM234BA2RU67 622 aa5.99□□□□□ -1.45
HMGB1P10-201ENST00000395823 B5MCH6 92 aa5.99□□□□□ -1.45
HMGB1P10-201ENST00000395823 THAP12O43422 761 aa5.99□□□□□ -1.45
HMGB1P10-201ENST00000395823 CNOT4O95628 575 aaKnown RBP5.99□□□□□ -1.45
HMGB1P10-201ENST00000395823 GRPP07492 148 aa5.99□□□□□ -1.45
HMGB1P10-201ENST00000395823 TXNP10599 105 aaKnown RBP5.99□□□□□ -1.45
HMGB1P10-201ENST00000395823 PIM1P11309 404 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P10-201ENST00000395823 GABRB3P28472 473 aa5.99□□□□□ -1.45
HMGB1P10-201ENST00000395823 CCT5P48643 541 aa5.99□□□□□ -1.45
HMGB1P10-201ENST00000395823 RAP2BP61225 183 aa5.99□□□□□ -1.45
HMGB1P10-201ENST00000395823 TCF15Q12870 199 aa5.99□□□□□ -1.45
HMGB1P10-201ENST00000395823 RAB32Q13637 225 aa5.99□□□□□ -1.45
HMGB1P10-201ENST00000395823 BMT2Q1RMZ1 405 aa5.99□□□□□ -1.45
HMGB1P10-201ENST00000395823 RNF44Q7L0R7 432 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms