RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 TUBB8Q3ZCM7 444 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 C2CD6Q53TS8 623 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 CEP85LQ5SZL2 805 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 LLGL2Q6P1M3 1020 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 MAMDC4Q6UXC1 1216 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 LRRC31Q6UY01 552 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 IFNLR1Q8IU57 520 aaPredicted RBP9.64□□□□□ -0.87
TDP1-202ENST00000393452 GPRC5AQ8NFJ5 357 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 SLC10A4Q96EP9 437 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 NLRP4Q96MN2 994 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 C11orf70Q9BRQ4 267 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 TRIM31Q9BZY9 425 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 INO80BQ9C086 356 aaPredicted RBP9.64□□□□□ -0.87
TDP1-202ENST00000393452 MINDY3Q9H8M7 445 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 IFT122Q9HBG6 1241 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 TMBIM4Q9HC24 238 aa9.64□□□□□ -0.87
TDP1-202ENST00000393452 MRPL47Q9HD33 250 aaKnown RBP9.64□□□□□ -0.87
TDP1-202ENST00000393452 GLTPD2A6NH11 291 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 HMGB1P1B2RPK0 211 aaPredicted RBP9.63□□□□□ -0.87
TDP1-202ENST00000393452 B4GALT5O43286 388 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 LSM8O95777 96 aaKnown RBP9.63□□□□□ -0.87
TDP1-202ENST00000393452 IQCF3P0C7M6 154 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 CCNA1P78396 465 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 ZNF568Q3ZCX4 644 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 ZNF484Q5JVG2 852 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 EEF1DP3Q658K8 133 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 MMS22LQ6ZRQ5 1243 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 PASD1Q8IV76 773 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 SH2D3CQ8N5H7 860 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 EMID1Q96A84 441 aaPredicted RBP9.63□□□□□ -0.87
TDP1-202ENST00000393452 MS4A4AQ96JQ5 239 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 FAM129AQ9BZQ8 928 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 VTA1Q9NP79 307 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.63□□□□□ -0.87
TDP1-202ENST00000393452 SCINQ9Y6U3 715 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 TCRBV5S1A1TA0A578 114 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 PSTPIP1O43586 416 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 GH1P01241 217 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 LGALS2P05162 132 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 INSRRP14616 1297 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 ADORA2AP29274 412 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 CDH5P33151 784 aaPredicted RBP9.63□□□□□ -0.87
TDP1-202ENST00000393452 MAN1A1P33908 653 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 ASPAP45381 313 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 RPL21P46778 160 aaKnown RBP9.63□□□□□ -0.87
TDP1-202ENST00000393452 IRAK1P51617 712 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 KCTD16Q68DU8 428 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 KDM7AQ6ZMT4 941 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 ZNF467Q7Z7K2 595 aaPredicted RBP9.63□□□□□ -0.87
TDP1-202ENST00000393452 THNSL1Q8IYQ7 743 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 CEP120Q8N960 986 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 PPTC7Q8NI37 304 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 FBXO25Q8TCJ0 367 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 UBLCP1Q8WVY7 318 aaPredicted RBP9.63□□□□□ -0.87
TDP1-202ENST00000393452 MAIP1Q8WWC4 291 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 ZBTB10Q96DT7 871 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 FAXDC2Q96IV6 333 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 CAPS2Q9BXY5 557 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 KATNBL1Q9H079 304 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 CDT1Q9H211 546 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 EPB41L4BQ9H329 900 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 CISHQ9NSE2 258 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 PRMT7Q9NVM4 692 aaPredicted RBP9.63□□□□□ -0.87
TDP1-202ENST00000393452 PARP2Q9UGN5 583 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 SNX24Q9Y343 169 aa9.63□□□□□ -0.87
TDP1-202ENST00000393452 GRIN2DO15399 1336 aa9.62□□□□□ -0.87
TDP1-202ENST00000393452 KAT6AQ92794 2004 aa9.62□□□□□ -0.87
TDP1-202ENST00000393452 MAGEB2O15479 319 aa9.62□□□□□ -0.87
TDP1-202ENST00000393452 IL18RAPO95256 599 aa9.62□□□□□ -0.87
TDP1-202ENST00000393452 IVLP07476 585 aa9.62□□□□□ -0.87
TDP1-202ENST00000393452 TMEM191BP0C7N4 346 aa9.62□□□□□ -0.87
TDP1-202ENST00000393452 TFAMQ00059 246 aaKnown RBP9.62□□□□□ -0.87
TDP1-202ENST00000393452 KLF1Q13351 362 aaPredicted RBP9.62□□□□□ -0.87
TDP1-202ENST00000393452 TRPC3Q13507 836 aa9.62□□□□□ -0.87
TDP1-202ENST00000393452 ZNF699Q32M78 642 aa9.62□□□□□ -0.87
TDP1-202ENST00000393452 GJC2Q5T442 439 aaPredicted RBP9.62□□□□□ -0.87
TDP1-202ENST00000393452 CCDC105Q8IYK2 499 aa9.62□□□□□ -0.87
TDP1-202ENST00000393452 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.62□□□□□ -0.87
TDP1-202ENST00000393452 FEZF2Q8TBJ5 459 aa9.62□□□□□ -0.87
TDP1-202ENST00000393452 FAM212AQ96EL1 285 aa9.62□□□□□ -0.87
TDP1-202ENST00000393452 ZNF518BQ9C0D4 1074 aa9.62□□□□□ -0.87
TDP1-202ENST00000393452 PARVAQ9NVD7 372 aa9.62□□□□□ -0.87
TDP1-202ENST00000393452 PCDHGC3Q9UN70 934 aa9.62□□□□□ -0.87
TDP1-202ENST00000393452 COL1A2P08123 1366 aa9.62□□□□□ -0.87
TDP1-202ENST00000393452 GOLGA6L10A6NI86 522 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 GPR25O00155 361 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 PDHXO00330 501 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 TLR3O15455 904 aaKnown RBP9.61□□□□□ -0.87
TDP1-202ENST00000393452 STRNO43815 780 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 ERLIN2O94905 339 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 TNNC2P02585 160 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 NUDT17P0C025 328 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 MYZAPP0CAP1 466 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 EIF4BP23588 611 aaKnown RBP9.61□□□□□ -0.87
TDP1-202ENST00000393452 PHKA2P46019 1235 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 PLTPP55058 493 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 AMHR2Q16671 573 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 SGO2Q562F6 1265 aa9.61□□□□□ -0.87
TDP1-202ENST00000393452 EAPPQ56P03 285 aaPredicted RBP9.61□□□□□ -0.87
TDP1-202ENST00000393452 RUFY4Q6ZNE9 571 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms