RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 H3BRJ5 948 aa13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 ACO1P21399 889 aaKnown RBP13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 SMTNL2Q2TAL5 461 aa13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 GDAP1Q8TB36 358 aa13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 BCAS4Q8TDM0 211 aa13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 L3MBTL3Q96JM7 780 aaPredicted RBP13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 GSTA1P08263 222 aa13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 GSTA2P09210 222 aa13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 FAM200BP0CF97 657 aa13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 TROVE2P10155 538 aaKnown RBP eCLIP13.84□□□□□ -0.191e-7■■□□□ 11.8
PTPRN2-202ENST00000389416 RAP1GAPP47736 663 aa13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 MDM2Q00987 491 aaPredicted RBP13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 SH3TC2Q8TF17 1288 aa13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 FAM118BQ9BPY3 351 aa13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 TRPC7Q9HCX4 862 aa13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 SLC8A2Q9UPR5 921 aa13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 FAM208AQ9UK61 1670 aaKnown RBP13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 CASTOR2A6NHX0 329 aa13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 MT-ND3P03897 115 aa13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 SPATA31C1P0DKV0 1188 aa13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 CYP11B1P15538 503 aa13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 ARL4CP56559 192 aa13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 MYBPC2Q14324 1141 aa13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 ZKSCAN8Q15776 578 aaPredicted RBP13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 CD302Q8IX05 232 aa13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 DCP1BQ8IZD4 617 aaKnown RBP13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 DNAJC19Q96DA6 116 aa13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 HPCAL4Q9UM19 191 aa13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 AHDC1Q5TGY3 1603 aaPredicted RBP13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 SPATA31C2B4DYI2 1134 aa13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 POMCP01189 267 aa13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 MAPTP10636 758 aaKnown RBP13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 BMP6P22004 513 aa13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 RECQLP46063 649 aaPredicted RBP13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 HSD17B4P51659 736 aa13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 RNF219Q5W0B1 726 aaPredicted RBP13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 PID1Q7Z2X4 250 aa13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 FSD1LQ9BXM9 530 aa13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 CISHQ9NSE2 258 aa13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.84□□□□□ -0.197e-7■■■■■ 36.3
PTPRN2-202ENST00000389416 TJP2Q9UDY2 1190 aa13.84□□□□□ -0.19
PTPRN2-202ENST00000389416 IGKV6D-41A0A0C4DH26 115 aa13.83□□□□□ -0.2
PTPRN2-202ENST00000389416 CYB561D2O14569 222 aa13.83□□□□□ -0.2
PTPRN2-202ENST00000389416 KRT14P02533 472 aa13.83□□□□□ -0.2
PTPRN2-202ENST00000389416 SKIP12755 728 aa13.83□□□□□ -0.2
PTPRN2-202ENST00000389416 CDR2Q01850 454 aa13.83□□□□□ -0.2
PTPRN2-202ENST00000389416 HSDL1Q3SXM5 330 aa13.83□□□□□ -0.2
PTPRN2-202ENST00000389416 ASAP3Q8TDY4 903 aa13.83□□□□□ -0.2
PTPRN2-202ENST00000389416 INPP4AQ96PE3 977 aaPredicted RBP13.83□□□□□ -0.2
PTPRN2-202ENST00000389416 EPAS1Q99814 870 aa13.83□□□□□ -0.2
PTPRN2-202ENST00000389416 TIMM13Q9Y5L4 95 aaPredicted RBP13.83□□□□□ -0.2
PTPRN2-202ENST00000389416 TPI1P60174 286 aa13.83□□□□□ -0.2
PTPRN2-202ENST00000389416 COG7P83436 770 aa13.83□□□□□ -0.2
PTPRN2-202ENST00000389416 SKIV2LQ15477 1246 aaKnown RBP13.83□□□□□ -0.2
PTPRN2-202ENST00000389416 UGCGQ16739 394 aa13.83□□□□□ -0.2
PTPRN2-202ENST00000389416 SYCP2LQ5T4T6 812 aa13.83□□□□□ -0.2
PTPRN2-202ENST00000389416 PARD3BQ8TEW8 1205 aa13.83□□□□□ -0.2
PTPRN2-202ENST00000389416 DNAJC7Q99615 494 aa13.83□□□□□ -0.2
PTPRN2-202ENST00000389416 PLEKHA5Q9HAU0 1116 aa13.83□□□□□ -0.2
PTPRN2-202ENST00000389416 BTBD7Q9P203 1132 aa13.83□□□□□ -0.2
PTPRN2-202ENST00000389416 SNCAIPQ9Y6H5 919 aa13.83□□□□□ -0.2
PTPRN2-202ENST00000389416 LRRC37A3O60309 1634 aa13.83□□□□□ -0.2
PTPRN2-202ENST00000389416 FLT3LGP49771 235 aa13.83□□□□□ -0.2
PTPRN2-202ENST00000389416 EIF3EP60228 445 aaKnown RBP13.83□□□□□ -0.2
PTPRN2-202ENST00000389416 ROR1Q01973 937 aa13.83□□□□□ -0.2
PTPRN2-202ENST00000389416 DEUP1Q05D60 604 aa13.83□□□□□ -0.2
PTPRN2-202ENST00000389416 PIGHQ14442 188 aaPredicted RBP13.83□□□□□ -0.2
PTPRN2-202ENST00000389416 ZPBP2Q6X784 338 aa13.83□□□□□ -0.2
PTPRN2-202ENST00000389416 SDCCAG8Q86SQ7 713 aaPredicted RBP13.83□□□□□ -0.2
PTPRN2-202ENST00000389416 ZNF677Q86XU0 584 aa13.83□□□□□ -0.2
PTPRN2-202ENST00000389416 WDR49Q8IV35 697 aa13.83□□□□□ -0.2
PTPRN2-202ENST00000389416 LRRC8CQ8TDW0 803 aa13.83□□□□□ -0.2
PTPRN2-202ENST00000389416 PACSIN1Q9BY11 444 aa13.83□□□□□ -0.2
PTPRN2-202ENST00000389416 FAM237AA0A1B0GTK4 181 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 F8VZ95 297 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 PMLP29590 882 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 NNTQ13423 1086 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 ECM1Q16610 540 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 FIGNQ5HY92 759 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 MAP4K3Q8IVH8 894 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 SLC7A14Q8TBB6 771 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 CYFIP2Q96F07 1278 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 LRRC1Q9BTT6 524 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 TRIM62Q9BVG3 475 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 LACRTQ9GZZ8 138 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 UBN1Q9NPG3 1134 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 METTL5Q9NRN9 209 aaKnown RBP13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 ARHGAP20Q9P2F6 1191 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 TLK1Q9UKI8 766 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 GTF3C4Q9UKN8 822 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 GRID2IPA4D2P6 1211 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 KLRC4O43908 158 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 GLRA2P23416 452 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 SLC47A2Q86VL8 602 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 GANCQ8TET4 914 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 SLC20A1Q8WUM9 679 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 INTS13Q9NVM9 706 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 LRP6O75581 1613 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 DFFAO00273 331 aa13.82□□□□□ -0.2
PTPRN2-202ENST00000389416 GJB1P08034 283 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms