RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 TATDN1Q6P1N9 297 aa6.23□□□□□ -1.41
RNU4-4P-201ENST00000364588 Q7L0L9 218 aa6.23□□□□□ -1.41
RNU4-4P-201ENST00000364588 AACSQ86V21 672 aa6.23□□□□□ -1.41
RNU4-4P-201ENST00000364588 OSTM1Q86WC4 334 aa6.23□□□□□ -1.41
RNU4-4P-201ENST00000364588 SYNPOQ8N3V7 929 aa6.23□□□□□ -1.41
RNU4-4P-201ENST00000364588 DDX1Q92499 740 aaKnown RBP6.23□□□□□ -1.41
RNU4-4P-201ENST00000364588 USP6NLQ92738 828 aa6.23□□□□□ -1.41
RNU4-4P-201ENST00000364588 C12orf42Q96LP6 360 aa6.23□□□□□ -1.41
RNU4-4P-201ENST00000364588 SMURF1Q9HCE7 757 aa6.23□□□□□ -1.41
RNU4-4P-201ENST00000364588 TRIM39Q9HCM9 518 aa6.23□□□□□ -1.41
RNU4-4P-201ENST00000364588 IL1RAPL2Q9NP60 686 aa6.23□□□□□ -1.41
RNU4-4P-201ENST00000364588 KCND1Q9NSA2 647 aa6.23□□□□□ -1.41
RNU4-4P-201ENST00000364588 FLRT1Q9NZU1 646 aa6.23□□□□□ -1.41
RNU4-4P-201ENST00000364588 RABGAP1Q9Y3P9 1069 aa6.23□□□□□ -1.41
RNU4-4P-201ENST00000364588 MYH8P13535 1937 aa6.23□□□□□ -1.41
RNU4-4P-201ENST00000364588 LAMA3Q16787 3333 aa6.22□□□□□ -1.41
RNU4-4P-201ENST00000364588 TCRBV16S1A1N1A0A5B0 115 aa6.22□□□□□ -1.41
RNU4-4P-201ENST00000364588 MPHOSPH10O00566 681 aaKnown RBP6.22□□□□□ -1.41
RNU4-4P-201ENST00000364588 PRICKLE3O43900 615 aaPredicted RBP6.22□□□□□ -1.41
RNU4-4P-201ENST00000364588 HIP1RO75146 1068 aa6.22□□□□□ -1.41
RNU4-4P-201ENST00000364588 COL6A1P12109 1028 aa6.22□□□□□ -1.41
RNU4-4P-201ENST00000364588 CNGA1P29973 690 aa6.22□□□□□ -1.41
RNU4-4P-201ENST00000364588 GUCY1A2P33402 732 aa6.22□□□□□ -1.41
RNU4-4P-201ENST00000364588 SHMT1P34896 483 aa6.22□□□□□ -1.41
RNU4-4P-201ENST00000364588 CCNA1P78396 465 aa6.22□□□□□ -1.41
RNU4-4P-201ENST00000364588 SEPT2Q15019 361 aa6.22□□□□□ -1.41
RNU4-4P-201ENST00000364588 CEP85Q6P2H3 762 aa6.22□□□□□ -1.41
RNU4-4P-201ENST00000364588 PKN3Q6P5Z2 889 aa6.22□□□□□ -1.41
RNU4-4P-201ENST00000364588 CATSPERGQ6ZRH7 1159 aa6.22□□□□□ -1.41
RNU4-4P-201ENST00000364588 FERMT3Q86UX7 667 aa6.22□□□□□ -1.41
RNU4-4P-201ENST00000364588 REXO1L1PQ8IX06 675 aa6.22□□□□□ -1.41
RNU4-4P-201ENST00000364588 TDHQ8IZJ6 230 aa6.22□□□□□ -1.41
RNU4-4P-201ENST00000364588 DEFB123Q8N688 67 aa6.22□□□□□ -1.41
RNU4-4P-201ENST00000364588 EDC3Q96F86 508 aaKnown RBP6.22□□□□□ -1.41
RNU4-4P-201ENST00000364588 SCLYQ96I15 445 aa6.22□□□□□ -1.41
RNU4-4P-201ENST00000364588 KIAA1683Q9H0B3 1180 aa6.22□□□□□ -1.41
RNU4-4P-201ENST00000364588 RPAP3Q9H6T3 665 aaPredicted RBP6.22□□□□□ -1.41
RNU4-4P-201ENST00000364588 CABP5Q9NP86 173 aa6.22□□□□□ -1.41
RNU4-4P-201ENST00000364588 BTBD7Q9P203 1132 aa6.22□□□□□ -1.41
RNU4-4P-201ENST00000364588 COQ6Q9Y2Z9 468 aa6.22□□□□□ -1.41
RNU4-4P-201ENST00000364588 BAZ2AQ9UIF9 1905 aaKnown RBP6.22□□□□□ -1.41
RNU4-4P-201ENST00000364588 A0A1W2PRG0 241 aa6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 SLC15A5A6NIM6 579 aa6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 FAM90A27PA6NNH2 459 aa6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 H0Y858 1186 aa6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 K7ESM1 405 aa6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 GOLIM4O00461 696 aa6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 IGSF3O75054 1194 aa6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 GLRX3O76003 335 aaKnown RBP6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 PLATP00750 562 aa6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 KNG1P01042 644 aa6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 CYP2D6P10635 497 aa6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 AOAHP28039 575 aa6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 CYP2C19P33261 490 aa6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 IGFALSP35858 605 aa6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 USP14P54578 494 aa6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 SLC9C2Q5TAH2 1124 aa6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 MFSD14CQ5VZR4 134 aa6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 ANO1Q5XXA6 986 aa6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 DDX53Q86TM3 631 aaKnown RBP6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 CERS3Q8IU89 383 aa6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 ERC1Q8IUD2 1116 aa6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 NOSTRINQ8IVI9 506 aa6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 SLC44A5Q8NCS7 719 aa6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 SDR42E1Q8WUS8 393 aa6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 RIOK1Q9BRS2 568 aaKnown RBP6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 SENP6Q9GZR1 1112 aaPredicted RBP6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 KCNH7Q9NS40 1196 aa6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 TMEM260Q9NX78 707 aa6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 MCM9Q9NXL9 1143 aa6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 DDX20Q9UHI6 824 aaKnown RBP6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 DUSP10Q9Y6W6 482 aa6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 ZNF532Q9HCE3 1301 aa6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 RLFQ13129 1914 aa6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 ZNFX1Q9P2E3 1918 aaKnown RBP6.21□□□□□ -1.42
RNU4-4P-201ENST00000364588 COL11A1P12107 1806 aaPredicted RBP6.2□□□□□ -1.42
RNU4-4P-201ENST00000364588 SLC12A8A0AV02 714 aa6.2□□□□□ -1.42
RNU4-4P-201ENST00000364588 LAMTOR5O43504 91 aa6.2□□□□□ -1.42
RNU4-4P-201ENST00000364588 C4BPAP04003 597 aaKnown RBP6.2□□□□□ -1.42
RNU4-4P-201ENST00000364588 PTGS1P23219 599 aa6.2□□□□□ -1.42
RNU4-4P-201ENST00000364588 GLRBP48167 497 aa6.2□□□□□ -1.42
RNU4-4P-201ENST00000364588 PLP2Q04941 152 aa6.2□□□□□ -1.42
RNU4-4P-201ENST00000364588 GABPAQ06546 454 aa6.2□□□□□ -1.42
RNU4-4P-201ENST00000364588 SQSTM1Q13501 440 aa6.2□□□□□ -1.42
RNU4-4P-201ENST00000364588 GRB14Q14449 540 aa6.2□□□□□ -1.42
RNU4-4P-201ENST00000364588 PLS1Q14651 629 aa6.2□□□□□ -1.42
RNU4-4P-201ENST00000364588 LRIT3Q3SXY7 679 aa6.2□□□□□ -1.42
RNU4-4P-201ENST00000364588 TMEM177Q53S58 311 aa6.2□□□□□ -1.42
RNU4-4P-201ENST00000364588 KIAA1755Q5JYT7 1200 aa6.2□□□□□ -1.42
RNU4-4P-201ENST00000364588 FGD2Q7Z6J4 655 aa6.2□□□□□ -1.42
RNU4-4P-201ENST00000364588 RALYLQ86SE5 291 aaKnown RBP6.2□□□□□ -1.42
RNU4-4P-201ENST00000364588 DPP9Q86TI2 863 aa6.2□□□□□ -1.42
RNU4-4P-201ENST00000364588 LCORLQ8N3X6 602 aa6.2□□□□□ -1.42
RNU4-4P-201ENST00000364588 STPG3Q8N7X2 389 aa6.2□□□□□ -1.42
RNU4-4P-201ENST00000364588 TRPV1Q8NER1 839 aa6.2□□□□□ -1.42
RNU4-4P-201ENST00000364588 MBD6Q96DN6 1003 aa6.2□□□□□ -1.42
RNU4-4P-201ENST00000364588 DYNLL2Q96FJ2 89 aa6.2□□□□□ -1.42
RNU4-4P-201ENST00000364588 MOV10L1Q9BXT6 1211 aaKnown RBP6.2□□□□□ -1.42
RNU4-4P-201ENST00000364588 CRNKL1Q9BZJ0 848 aaKnown RBP6.2□□□□□ -1.42
RNU4-4P-201ENST00000364588 ARMT1Q9H993 441 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms