RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 SCINQ9Y6U3 715 aa20.22■□□□□ 0.83
VBP1-201ENST00000286428 EVPLQ92817 2033 aa20.22■□□□□ 0.83
VBP1-201ENST00000286428 XPOTO43592 962 aaKnown RBP20.22■□□□□ 0.83
VBP1-201ENST00000286428 ITGB3P05106 788 aa20.22■□□□□ 0.83
VBP1-201ENST00000286428 PAEPP09466 180 aa20.22■□□□□ 0.83
VBP1-201ENST00000286428 SLC1A1P43005 524 aa20.22■□□□□ 0.83
VBP1-201ENST00000286428 SP3Q02447 781 aa20.22■□□□□ 0.83
VBP1-201ENST00000286428 C1QBPQ07021 282 aaKnown RBP20.22■□□□□ 0.83
VBP1-201ENST00000286428 C2orf54Q08AI8 447 aa20.22■□□□□ 0.83
VBP1-201ENST00000286428 WDR72Q3MJ13 1102 aa20.22■□□□□ 0.83
VBP1-201ENST00000286428 CYP4F22Q6NT55 531 aa20.22■□□□□ 0.83
VBP1-201ENST00000286428 CC2D1AQ6P1N0 951 aaPredicted RBP20.22■□□□□ 0.83
VBP1-201ENST00000286428 PHF13Q86YI8 300 aaPredicted RBP20.22■□□□□ 0.83
VBP1-201ENST00000286428 TMEM192Q8IY95 271 aa20.22■□□□□ 0.83
VBP1-201ENST00000286428 USP38Q8NB14 1042 aa20.22■□□□□ 0.83
VBP1-201ENST00000286428 TMEM35BQ8NCS4 154 aa20.22■□□□□ 0.83
VBP1-201ENST00000286428 ELMO3Q96BJ8 720 aa20.22■□□□□ 0.83
VBP1-201ENST00000286428 LENG1Q96BZ8 264 aaPredicted RBP20.22■□□□□ 0.83
VBP1-201ENST00000286428 EPC1Q9H2F5 836 aa20.22■□□□□ 0.83
VBP1-201ENST00000286428 NXF1Q9UBU9 619 aaKnown RBP20.22■□□□□ 0.83
VBP1-201ENST00000286428 COG5Q9UP83 839 aa20.22■□□□□ 0.83
VBP1-201ENST00000286428 CCDC66A2RUB6 948 aa20.21■□□□□ 0.83
VBP1-201ENST00000286428 TREHO43280 583 aa20.21■□□□□ 0.83
VBP1-201ENST00000286428 NPTXRO95502 500 aa20.21■□□□□ 0.83
VBP1-201ENST00000286428 TBC1D8O95759 1140 aa20.21■□□□□ 0.83
VBP1-201ENST00000286428 HOXA11P31270 313 aaPredicted RBP20.21■□□□□ 0.83
VBP1-201ENST00000286428 ASPAP45381 313 aa20.21■□□□□ 0.83
VBP1-201ENST00000286428 TMEM62Q0P6H9 643 aa20.21■□□□□ 0.83
VBP1-201ENST00000286428 DEFB115Q30KQ5 88 aa20.21■□□□□ 0.83
VBP1-201ENST00000286428 C8orf74Q6P047 294 aa20.21■□□□□ 0.83
VBP1-201ENST00000286428 CYFIP2Q96F07 1278 aa20.21■□□□□ 0.83
VBP1-201ENST00000286428 KIF12Q96FN5 646 aa20.21■□□□□ 0.83
VBP1-201ENST00000286428 BCO2Q9BYV7 579 aa20.21■□□□□ 0.83
VBP1-201ENST00000286428 DNAI2Q9GZS0 605 aa20.21■□□□□ 0.83
VBP1-201ENST00000286428 DPP3Q9NY33 737 aa20.21■□□□□ 0.83
VBP1-201ENST00000286428 ADAM22Q9P0K1 906 aa20.21■□□□□ 0.83
VBP1-201ENST00000286428 PCDHGC3Q9UN70 934 aa20.21■□□□□ 0.83
VBP1-201ENST00000286428 UMODL1Q5DID0 1318 aa20.21■□□□□ 0.83
VBP1-201ENST00000286428 MYH10P35580 1976 aa20.21■□□□□ 0.83
VBP1-201ENST00000286428 KAT6AQ92794 2004 aa20.21■□□□□ 0.83
VBP1-201ENST00000286428 CALB1P05937 261 aa20.2■□□□□ 0.82
VBP1-201ENST00000286428 ATF7P17544 494 aaPredicted RBP20.2■□□□□ 0.82
VBP1-201ENST00000286428 CTGFP29279 349 aa20.2■□□□□ 0.82
VBP1-201ENST00000286428 MESDQ14696 234 aa20.2■□□□□ 0.82
VBP1-201ENST00000286428 SNX17Q15036 470 aa20.2■□□□□ 0.82
VBP1-201ENST00000286428 NAA35Q5VZE5 725 aa20.2■□□□□ 0.82
VBP1-201ENST00000286428 RUFY4Q6ZNE9 571 aa20.2■□□□□ 0.82
VBP1-201ENST00000286428 BEST2Q8NFU1 509 aa20.2■□□□□ 0.82
VBP1-201ENST00000286428 TRIB2Q92519 343 aa20.2■□□□□ 0.82
VBP1-201ENST00000286428 MS4A14Q96JA4 679 aa20.2■□□□□ 0.82
VBP1-201ENST00000286428 SIX4Q9UIU6 781 aa20.2■□□□□ 0.82
VBP1-201ENST00000286428 MYO1FO00160 1098 aa20.19■□□□□ 0.82
VBP1-201ENST00000286428 HSPA6P17066 643 aa20.19■□□□□ 0.82
VBP1-201ENST00000286428 CD58P19256 250 aa20.19■□□□□ 0.82
VBP1-201ENST00000286428 NOMO3P69849 1222 aa20.19■□□□□ 0.82
VBP1-201ENST00000286428 CPA5Q8WXQ8 436 aa20.19■□□□□ 0.82
VBP1-201ENST00000286428 HPDLQ96IR7 371 aa20.19■□□□□ 0.82
VBP1-201ENST00000286428 CFHR5Q9BXR6 569 aa20.19■□□□□ 0.82
VBP1-201ENST00000286428 KIAA1257Q9ULG3 409 aa20.19■□□□□ 0.82
VBP1-201ENST00000286428 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.19■□□□□ 0.82
VBP1-201ENST00000286428 GOLGA6L10A0A0M3HER8 536 aa20.19■□□□□ 0.82
VBP1-201ENST00000286428 SPOPO43791 374 aa20.19■□□□□ 0.82
VBP1-201ENST00000286428 POLR2BP30876 1174 aaKnown RBP20.19■□□□□ 0.82
VBP1-201ENST00000286428 TAP1Q03518 808 aa20.19■□□□□ 0.82
VBP1-201ENST00000286428 MON1BQ7L1V2 547 aa20.19■□□□□ 0.82
VBP1-201ENST00000286428 TRPV1Q8NER1 839 aa20.19■□□□□ 0.82
VBP1-201ENST00000286428 ZIC5Q96T25 663 aa20.19■□□□□ 0.82
VBP1-201ENST00000286428 PNKPQ96T60 521 aa20.19■□□□□ 0.82
VBP1-201ENST00000286428 LHX5Q9H2C1 402 aa20.19■□□□□ 0.82
VBP1-201ENST00000286428 GOLPH3Q9H4A6 298 aa20.19■□□□□ 0.82
VBP1-201ENST00000286428 PARVAQ9NVD7 372 aa20.19■□□□□ 0.82
VBP1-201ENST00000286428 OGFRQ9NZT2 677 aa20.19■□□□□ 0.82
VBP1-201ENST00000286428 GTF2IRD1Q9UHL9 959 aa20.19■□□□□ 0.82
VBP1-201ENST00000286428 TMEM59LQ9UK28 342 aa20.19■□□□□ 0.82
VBP1-201ENST00000286428 GABRQQ9UN88 632 aa20.19■□□□□ 0.82
VBP1-201ENST00000286428 AGAP1Q9UPQ3 857 aa20.19■□□□□ 0.82
VBP1-201ENST00000286428 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.19■□□□□ 0.82
VBP1-201ENST00000286428 DDX3YO15523 660 aaKnown RBP20.18■□□□□ 0.82
VBP1-201ENST00000286428 ZRANB2O95218 330 aaKnown RBP eCLIP20.18■□□□□ 0.82
VBP1-201ENST00000286428 WEE2P0C1S8 567 aa20.18■□□□□ 0.82
VBP1-201ENST00000286428 PRKCZQ05513 592 aa20.18■□□□□ 0.82
VBP1-201ENST00000286428 CELF4Q9BZC1 486 aaKnown RBP20.18■□□□□ 0.82
VBP1-201ENST00000286428 RBM12Q9NTZ6 932 aaKnown RBP20.18■□□□□ 0.82
VBP1-201ENST00000286428 STRIP2Q9ULQ0 834 aa20.18■□□□□ 0.82
VBP1-201ENST00000286428 PIN4Q9Y237 131 aaKnown RBP20.18■□□□□ 0.82
VBP1-201ENST00000286428 TLR3O15455 904 aaKnown RBP20.17■□□□□ 0.82
VBP1-201ENST00000286428 GNRH1P01148 92 aa20.17■□□□□ 0.82
VBP1-201ENST00000286428 CD4P01730 458 aa20.17■□□□□ 0.82
VBP1-201ENST00000286428 COMTP21964 271 aa20.17■□□□□ 0.82
VBP1-201ENST00000286428 FGFR4P22455 802 aa20.17■□□□□ 0.82
VBP1-201ENST00000286428 CTNNA2P26232 953 aa20.17■□□□□ 0.82
VBP1-201ENST00000286428 CDH5P33151 784 aaPredicted RBP20.17■□□□□ 0.82
VBP1-201ENST00000286428 VSNL1P62760 191 aa20.17■□□□□ 0.82
VBP1-201ENST00000286428 SEL1L2Q5TEA6 688 aa20.17■□□□□ 0.82
VBP1-201ENST00000286428 HDXQ7Z353 690 aa20.17■□□□□ 0.82
VBP1-201ENST00000286428 HACE1Q8IYU2 909 aa20.17■□□□□ 0.82
VBP1-201ENST00000286428 LRRC52Q8N7C0 313 aa20.17■□□□□ 0.82
VBP1-201ENST00000286428 PCSK9Q8NBP7 692 aaKnown RBP20.17■□□□□ 0.82
VBP1-201ENST00000286428 CCDC26Q8TAB7 109 aa20.17■□□□□ 0.82
VBP1-201ENST00000286428 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms