RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 C2CD2LO14523 706 aa13.02□□□□□ -0.32
ARFGEF1-201ENST00000262215 TADA2AO75478 443 aa13.02□□□□□ -0.32
ARFGEF1-201ENST00000262215 ALDH1A1P00352 501 aa13.02□□□□□ -0.32
ARFGEF1-201ENST00000262215 TFE3P19532 575 aaPredicted RBP13.02□□□□□ -0.32
ARFGEF1-201ENST00000262215 NMT1P30419 496 aaKnown RBP13.02□□□□□ -0.32
ARFGEF1-201ENST00000262215 GSSP48637 474 aa13.02□□□□□ -0.32
ARFGEF1-201ENST00000262215 OVGP1Q12889 678 aa13.02□□□□□ -0.32
ARFGEF1-201ENST00000262215 FLAD1Q8NFF5 587 aa13.02□□□□□ -0.32
ARFGEF1-201ENST00000262215 ERLEC1Q96DZ1 483 aa13.02□□□□□ -0.32
ARFGEF1-201ENST00000262215 CD248Q9HCU0 757 aa13.02□□□□□ -0.32
ARFGEF1-201ENST00000262215 AGAP1Q9UPQ3 857 aa13.02□□□□□ -0.32
ARFGEF1-201ENST00000262215 TMA7Q9Y2S6 64 aaKnown RBP13.02□□□□□ -0.32
ARFGEF1-201ENST00000262215 NEDD4P46934 1319 aa13.02□□□□□ -0.32
ARFGEF1-201ENST00000262215 CC2D2AQ9P2K1 1620 aa13.02□□□□□ -0.32
ARFGEF1-201ENST00000262215 ATMINO43313 823 aaPredicted RBP13.02□□□□□ -0.32
ARFGEF1-201ENST00000262215 USP1O94782 785 aa13.02□□□□□ -0.32
ARFGEF1-201ENST00000262215 ALBP02768 609 aa13.02□□□□□ -0.32
ARFGEF1-201ENST00000262215 PTK7Q13308 1070 aa13.02□□□□□ -0.32
ARFGEF1-201ENST00000262215 C16orf89Q6UX73 402 aa13.02□□□□□ -0.32
ARFGEF1-201ENST00000262215 RBM15Q96T37 977 aaKnown RBP eCLIP13.02□□□□□ -0.32
ARFGEF1-201ENST00000262215 ENDOD1O94919 500 aa13.02□□□□□ -0.33
ARFGEF1-201ENST00000262215 ZCCHC18P0CG32 403 aa13.02□□□□□ -0.33
ARFGEF1-201ENST00000262215 MTHFD1LQ6UB35 978 aa13.02□□□□□ -0.33
ARFGEF1-201ENST00000262215 RNF146Q9NTX7 359 aa13.02□□□□□ -0.33
ARFGEF1-201ENST00000262215 PNMA3Q9UL41 463 aa13.02□□□□□ -0.33
ARFGEF1-201ENST00000262215 DHX40Q8IX18 779 aaKnown RBP13.02□□□□□ -0.33
ARFGEF1-201ENST00000262215 KIRREL3Q8IZU9 778 aa13.02□□□□□ -0.33
ARFGEF1-201ENST00000262215 ZNF512Q96ME7 567 aaPredicted RBP13.02□□□□□ -0.33
ARFGEF1-201ENST00000262215 WDR24Q96S15 920 aa13.02□□□□□ -0.33
ARFGEF1-201ENST00000262215 SENP7Q9BQF6 1050 aa13.02□□□□□ -0.33
ARFGEF1-201ENST00000262215 MAP3K6O95382 1288 aa13.02□□□□□ -0.33
ARFGEF1-201ENST00000262215 SERPINB5P36952 375 aa13.02□□□□□ -0.33
ARFGEF1-201ENST00000262215 DALRD3Q5D0E6 543 aaKnown RBP13.02□□□□□ -0.33
ARFGEF1-201ENST00000262215 KLHL24Q6TFL4 600 aa13.02□□□□□ -0.33
ARFGEF1-201ENST00000262215 C2orf69Q8N8R5 385 aa13.02□□□□□ -0.33
ARFGEF1-201ENST00000262215 DNAJC9Q8WXX5 260 aa13.02□□□□□ -0.33
ARFGEF1-201ENST00000262215 GINS4Q9BRT9 223 aa13.02□□□□□ -0.33
ARFGEF1-201ENST00000262215 GPR63Q9BZJ6 419 aa13.02□□□□□ -0.33
ARFGEF1-201ENST00000262215 FAM129AQ9BZQ8 928 aa13.02□□□□□ -0.33
ARFGEF1-201ENST00000262215 RANBP17Q9H2T7 1088 aaKnown RBP13.02□□□□□ -0.33
ARFGEF1-201ENST00000262215 TRIM10Q9UDY6 481 aa13.02□□□□□ -0.33
ARFGEF1-201ENST00000262215 MRC2Q9UBG0 1479 aa13.02□□□□□ -0.33
ARFGEF1-201ENST00000262215 E9PBE3 544 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 PYGMP11217 842 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 ALOX15P16050 662 aaPredicted RBP13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 CYLC2Q14093 348 aaPredicted RBP13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 TAF5Q15542 800 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 CHI3L2Q15782 390 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 CNGA2Q16280 664 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 PGS1Q32NB8 556 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 NARS2Q96I59 477 aaKnown RBP13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 POLG2Q9UHN1 485 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 SLC39A10Q9ULF5 831 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 ZBTB5O15062 677 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 NUDT2P50583 147 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 OTUD4Q01804 1114 aaKnown RBP13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 SPP2Q13103 211 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 GPD1LQ8N335 351 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 SLAIN2Q9P270 581 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 PRRG1O14668 218 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 PDGFRAP16234 1089 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 COMMD2Q86X83 199 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 SPIRE2Q8WWL2 714 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 INTS13Q9NVM9 706 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 NEU2Q9Y3R4 380 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 FAM25AB3EWG3 89 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 FAM25CB3EWG5 89 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 FAM25GB3EWG6 89 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 TDP2O95551 362 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 WEE2P0C1S8 567 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 TARSP26639 723 aaKnown RBP13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 CHI3L1P36222 383 aaPredicted RBP13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 MDH1P40925 334 aaKnown RBP13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 MGAT5BQ3V5L5 792 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 TMC5Q6UXY8 1006 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 CYB5R4Q7L1T6 521 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 SIX5Q8N196 739 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 PCYOX1LQ8NBM8 494 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 TMEM143Q96AN5 459 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 CALR3Q96L12 384 aaKnown RBP13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 HDHD2Q9H0R4 259 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 KIAA1586Q9HCI6 787 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 EVPLLA8MZ36 301 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 ATP6V1C1P21283 382 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 TTLL4Q14679 1199 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 C3orf62Q6ZUJ4 267 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 UBA3Q8TBC4 463 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 ANKRD7Q92527 254 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 NACC2Q96BF6 587 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 AGPAT1Q99943 283 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 hCG_1984214I3L0E3 225 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 TRIM13O60858 407 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 CLASP2O75122 1294 aaKnown RBP13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 CDC27P30260 824 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 PSMC6P62333 389 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 ZNF200P98182 395 aaPredicted RBP13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 COG2Q14746 738 aa13.01□□□□□ -0.33
ARFGEF1-201ENST00000262215 DGKKQ5KSL6 1271 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms