RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 SSR1P43307 286 aaKnown RBP16.17■□□□□ 0.18
DDX56-201ENST00000258772 XKR3Q5GH77 459 aa16.17■□□□□ 0.18
DDX56-201ENST00000258772 PLCD3Q8N3E9 789 aa16.17■□□□□ 0.18
DDX56-201ENST00000258772 ZBTB45Q96K62 511 aaPredicted RBP16.17■□□□□ 0.18
DDX56-201ENST00000258772 C9orf72Q96LT7 481 aa16.17■□□□□ 0.18
DDX56-201ENST00000258772 SCINQ9Y6U3 715 aa16.17■□□□□ 0.18
DDX56-201ENST00000258772 SUN1O94901 812 aa16.17■□□□□ 0.18
DDX56-201ENST00000258772 UBOX5O94941 541 aa16.17■□□□□ 0.18
DDX56-201ENST00000258772 GJC1P36383 396 aa16.17■□□□□ 0.18
DDX56-201ENST00000258772 C1QBPQ07021 282 aaKnown RBP16.17■□□□□ 0.18
DDX56-201ENST00000258772 TNFAIP1Q13829 316 aa16.17■□□□□ 0.18
DDX56-201ENST00000258772 STAT4Q14765 748 aa16.17■□□□□ 0.18
DDX56-201ENST00000258772 EMC2Q15006 297 aa16.17■□□□□ 0.18
DDX56-201ENST00000258772 PREPLQ4J6C6 727 aaPredicted RBP16.17■□□□□ 0.18
DDX56-201ENST00000258772 WLSQ5T9L3 541 aa16.17■□□□□ 0.18
DDX56-201ENST00000258772 SNRNP48Q6IEG0 339 aaKnown RBP16.17■□□□□ 0.18
DDX56-201ENST00000258772 PRUNE1Q86TP1 453 aa16.17■□□□□ 0.18
DDX56-201ENST00000258772 REPS2Q8NFH8 660 aa16.17■□□□□ 0.18
DDX56-201ENST00000258772 GDAP1Q8TB36 358 aa16.17■□□□□ 0.18
DDX56-201ENST00000258772 FEZF2Q8TBJ5 459 aa16.17■□□□□ 0.18
DDX56-201ENST00000258772 CDHR1Q96JP9 859 aa16.17■□□□□ 0.18
DDX56-201ENST00000258772 CCDC77Q9BR77 488 aa16.17■□□□□ 0.18
DDX56-201ENST00000258772 AGAP1Q9UPQ3 857 aa16.17■□□□□ 0.18
DDX56-201ENST00000258772 CNTN6Q9UQ52 1028 aa16.17■□□□□ 0.18
DDX56-201ENST00000258772 GJB6O95452 261 aa16.16■□□□□ 0.18
DDX56-201ENST00000258772 KCNA3P22001 575 aa16.16■□□□□ 0.18
DDX56-201ENST00000258772 POLGP54098 1239 aaPredicted RBP16.16■□□□□ 0.18
DDX56-201ENST00000258772 GSTA5Q7RTV2 222 aa16.16■□□□□ 0.18
DDX56-201ENST00000258772 RBBP8NLQ8NC74 664 aaPredicted RBP16.16■□□□□ 0.18
DDX56-201ENST00000258772 TMEM143Q96AN5 459 aa16.16■□□□□ 0.18
DDX56-201ENST00000258772 NCAPGQ9BPX3 1015 aa16.16■□□□□ 0.18
DDX56-201ENST00000258772 RBAKQ9NYW8 714 aaPredicted RBP16.16■□□□□ 0.18
DDX56-201ENST00000258772 GGT7Q9UJ14 662 aa16.16■□□□□ 0.18
DDX56-201ENST00000258772 CFAP73A6NFT4 308 aa16.16■□□□□ 0.18
DDX56-201ENST00000258772 K7ERI5 159 aa16.16■□□□□ 0.18
DDX56-201ENST00000258772 EGFRP00533 1210 aa16.16■□□□□ 0.18
DDX56-201ENST00000258772 CLTAP09496 248 aa16.16■□□□□ 0.18
DDX56-201ENST00000258772 BACE1P56817 501 aa16.16■□□□□ 0.18
DDX56-201ENST00000258772 NFX1Q12986 1120 aaKnown RBP16.16■□□□□ 0.18
DDX56-201ENST00000258772 GALNTL6Q49A17 601 aa16.16■□□□□ 0.18
DDX56-201ENST00000258772 ATP13A4Q4VNC1 1196 aa16.16■□□□□ 0.18
DDX56-201ENST00000258772 ZBTB41Q5SVQ8 909 aa16.16■□□□□ 0.18
DDX56-201ENST00000258772 SLFN12LQ6IEE8 588 aa16.16■□□□□ 0.18
DDX56-201ENST00000258772 MIS18BP1Q6P0N0 1132 aa16.16■□□□□ 0.18
DDX56-201ENST00000258772 ARHGEF18Q6ZSZ5 1173 aa16.16■□□□□ 0.18
DDX56-201ENST00000258772 TBC1D1Q86TI0 1168 aaPredicted RBP16.16■□□□□ 0.18
DDX56-201ENST00000258772 SRRM1Q8IYB3 904 aaKnown RBP16.16■□□□□ 0.18
DDX56-201ENST00000258772 RBM15Q96T37 977 aaKnown RBP eCLIP16.16■□□□□ 0.184e-6■■■■□ 20.4
DDX56-201ENST00000258772 FOXP3Q9BZS1 431 aa16.16■□□□□ 0.18
DDX56-201ENST00000258772 PARVAQ9NVD7 372 aa16.16■□□□□ 0.18
DDX56-201ENST00000258772 EURLQ9NYK6 297 aa16.16■□□□□ 0.18
DDX56-201ENST00000258772 NUB1Q9Y5A7 615 aa16.16■□□□□ 0.18
DDX56-201ENST00000258772 LDHAP00338 332 aaKnown RBP16.15■□□□□ 0.18
DDX56-201ENST00000258772 PIGRP01833 764 aa16.15■□□□□ 0.18
DDX56-201ENST00000258772 ATP4AP20648 1035 aa16.15■□□□□ 0.18
DDX56-201ENST00000258772 TBXAS1P24557 533 aaPredicted RBP16.15■□□□□ 0.18
DDX56-201ENST00000258772 STX2P32856 288 aa16.15■□□□□ 0.18
DDX56-201ENST00000258772 CETN2P41208 172 aa16.15■□□□□ 0.18
DDX56-201ENST00000258772 MAGEA4P43358 317 aa16.15■□□□□ 0.18
DDX56-201ENST00000258772 NOP14P78316 857 aaKnown RBP16.15■□□□□ 0.18
DDX56-201ENST00000258772 LMNB2Q03252 620 aa16.15■□□□□ 0.18
DDX56-201ENST00000258772 P3H1Q32P28 736 aa16.15■□□□□ 0.18
DDX56-201ENST00000258772 TMEM63BQ5T3F8 832 aa16.15■□□□□ 0.18
DDX56-201ENST00000258772 CIAPIN1Q6FI81 312 aa16.15■□□□□ 0.18
DDX56-201ENST00000258772 PPP1R2P3Q6NXS1 205 aa16.15■□□□□ 0.18
DDX56-201ENST00000258772 SPATA21Q7Z572 469 aa16.15■□□□□ 0.18
DDX56-201ENST00000258772 CEP57Q86XR8 500 aa16.15■□□□□ 0.18
DDX56-201ENST00000258772 ZCCHC9Q8N567 271 aaKnown RBP16.15■□□□□ 0.18
DDX56-201ENST00000258772 ASAP3Q8TDY4 903 aa16.15■□□□□ 0.18
DDX56-201ENST00000258772 KCNN1Q92952 543 aa16.15■□□□□ 0.18
DDX56-201ENST00000258772 MAGEB18Q96M61 343 aa16.15■□□□□ 0.18
DDX56-201ENST00000258772 TGS1Q96RS0 853 aaKnown RBP16.15■□□□□ 0.18
DDX56-201ENST00000258772 ACTL7BQ9Y614 415 aa16.15■□□□□ 0.18
DDX56-201ENST00000258772 RLFQ13129 1914 aa16.15■□□□□ 0.18
DDX56-201ENST00000258772 GSTTP1A0A1W2PQM5 241 aa16.14■□□□□ 0.18
DDX56-201ENST00000258772 SPATA31C2B4DYI2 1134 aa16.14■□□□□ 0.18
DDX56-201ENST00000258772 ATP6V1G2O95670 118 aa16.14■□□□□ 0.18
DDX56-201ENST00000258772 SUPT20HL2P0C7V6 817 aa16.14■□□□□ 0.18
DDX56-201ENST00000258772 DPEP1P16444 411 aa16.14■□□□□ 0.18
DDX56-201ENST00000258772 GLRA2P23416 452 aa16.14■□□□□ 0.18
DDX56-201ENST00000258772 RPL7AP62424 266 aaKnown RBP16.14■□□□□ 0.18
DDX56-201ENST00000258772 MKRN3Q13064 507 aaKnown RBP16.14■□□□□ 0.18
DDX56-201ENST00000258772 SUPT20HL1Q3ZLR7 823 aa16.14■□□□□ 0.18
DDX56-201ENST00000258772 SEPT14Q6ZU15 432 aa16.14■□□□□ 0.18
DDX56-201ENST00000258772 RCOR2Q8IZ40 523 aa16.14■□□□□ 0.18
DDX56-201ENST00000258772 TCP11Q8WWU5 503 aa16.14■□□□□ 0.18
DDX56-201ENST00000258772 ZNF606Q8WXB4 792 aa16.14■□□□□ 0.18
DDX56-201ENST00000258772 CGRRF1Q99675 332 aa16.14■□□□□ 0.18
DDX56-201ENST00000258772 PORCNQ9H237 461 aa16.14■□□□□ 0.18
DDX56-201ENST00000258772 NKIRAS1Q9NYS0 192 aa16.14■□□□□ 0.18
DDX56-201ENST00000258772 PRKAG3Q9UGI9 489 aa16.14■□□□□ 0.18
DDX56-201ENST00000258772 IP6K2Q9UHH9 426 aa16.14■□□□□ 0.18
DDX56-201ENST00000258772 ARL2BPQ9Y2Y0 163 aa16.14■□□□□ 0.18
DDX56-201ENST00000258772 LRRIQ4A6NIV6 560 aa16.14■□□□□ 0.17
DDX56-201ENST00000258772 PI4K2BG5E9Z4 385 aa16.14■□□□□ 0.17
DDX56-201ENST00000258772 ABHD2P08910 425 aa16.14■□□□□ 0.17
DDX56-201ENST00000258772 KRT10P13645 584 aa16.14■□□□□ 0.17
DDX56-201ENST00000258772 SLC8A1P32418 973 aa16.14■□□□□ 0.17
DDX56-201ENST00000258772 MAP2K2P36507 400 aa16.14■□□□□ 0.17
DDX56-201ENST00000258772 NCALDP61601 193 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms