RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 NPTX2P47972 431 aa18.03■□□□□ 0.48
SLC1A4-201ENST00000234256 OVGP1Q12889 678 aa18.03■□□□□ 0.48
SLC1A4-201ENST00000234256 SLC47A2Q86VL8 602 aa18.03■□□□□ 0.48
SLC1A4-201ENST00000234256 CCDC33Q8N5R6 958 aa18.03■□□□□ 0.48
SLC1A4-201ENST00000234256 FAM71DQ8N9W8 422 aa18.03■□□□□ 0.48
SLC1A4-201ENST00000234256 FEZF2Q8TBJ5 459 aa18.03■□□□□ 0.48
SLC1A4-201ENST00000234256 RAPGEF5Q92565 580 aa18.03■□□□□ 0.48
SLC1A4-201ENST00000234256 ALKBH8Q96BT7 664 aaKnown RBP18.03■□□□□ 0.48
SLC1A4-201ENST00000234256 RNF181Q9P0P0 153 aa18.03■□□□□ 0.48
SLC1A4-201ENST00000234256 SLC4A7Q9Y6M7 1214 aa18.03■□□□□ 0.48
SLC1A4-201ENST00000234256 GOLGA8QA0A0J9YX86 632 aa18.03■□□□□ 0.48
SLC1A4-201ENST00000234256 GOLGA8OA6NCC3 632 aa18.03■□□□□ 0.48
SLC1A4-201ENST00000234256 GOLGA8NF8WBI6 632 aa18.03■□□□□ 0.48
SLC1A4-201ENST00000234256 FASTKD1Q53R41 847 aaKnown RBP18.03■□□□□ 0.48
SLC1A4-201ENST00000234256 SH3RF1Q7Z6J0 888 aa18.03■□□□□ 0.48
SLC1A4-201ENST00000234256 APOBEC3FQ8IUX4 373 aaKnown RBP18.03■□□□□ 0.48
SLC1A4-201ENST00000234256 TIPINQ9BVW5 301 aa18.03■□□□□ 0.48
SLC1A4-201ENST00000234256 TSSK1BQ9BXA7 367 aa18.03■□□□□ 0.48
SLC1A4-201ENST00000234256 SUDS3Q9H7L9 328 aaPredicted RBP18.03■□□□□ 0.48
SLC1A4-201ENST00000234256 PIN4Q9Y237 131 aaKnown RBP18.03■□□□□ 0.48
SLC1A4-201ENST00000234256 IGSF9BQ9UPX0 1349 aa18.03■□□□□ 0.48
SLC1A4-201ENST00000234256 FAM86B1E9PN63 330 aa18.03■□□□□ 0.48
SLC1A4-201ENST00000234256 EPHB6O15197 1021 aa18.03■□□□□ 0.48
SLC1A4-201ENST00000234256 FAM86B2P0C5J1 330 aa18.03■□□□□ 0.48
SLC1A4-201ENST00000234256 CYP11B1P15538 503 aa18.03■□□□□ 0.48
SLC1A4-201ENST00000234256 CDK17Q00537 523 aa18.03■□□□□ 0.48
SLC1A4-201ENST00000234256 YWHAHQ04917 246 aaPredicted RBP18.03■□□□□ 0.48
SLC1A4-201ENST00000234256 TRIML2Q8N7C3 387 aa18.03■□□□□ 0.48
SLC1A4-201ENST00000234256 NCAPGQ9BPX3 1015 aa18.03■□□□□ 0.48
SLC1A4-201ENST00000234256 GCOM2Q9BZD3 368 aaPredicted RBP18.03■□□□□ 0.48
SLC1A4-201ENST00000234256 SARS2Q9NP81 518 aaKnown RBP18.03■□□□□ 0.48
SLC1A4-201ENST00000234256 GGA3Q9NZ52 723 aa18.03■□□□□ 0.48
SLC1A4-201ENST00000234256 LRFN2Q9ULH4 789 aa18.03■□□□□ 0.48
SLC1A4-201ENST00000234256 KPNA7A9QM74 516 aa18.02■□□□□ 0.48
SLC1A4-201ENST00000234256 PFDN1O60925 122 aa18.02■□□□□ 0.48
SLC1A4-201ENST00000234256 SHMT1P34896 483 aa18.02■□□□□ 0.48
SLC1A4-201ENST00000234256 CDKL3Q8IVW4 592 aaPredicted RBP18.02■□□□□ 0.48
SLC1A4-201ENST00000234256 TSC22D3Q99576 134 aa18.02■□□□□ 0.48
SLC1A4-201ENST00000234256 PCMTD2Q9NV79 361 aa18.02■□□□□ 0.48
SLC1A4-201ENST00000234256 LRRC10BA6NIK2 292 aa18.02■□□□□ 0.48
SLC1A4-201ENST00000234256 S100BP04271 92 aaPredicted RBP18.02■□□□□ 0.48
SLC1A4-201ENST00000234256 ANKRD20A4Q4UJ75 823 aa18.02■□□□□ 0.48
SLC1A4-201ENST00000234256 ANKRD20A8PQ5CZ79 823 aa18.02■□□□□ 0.48
SLC1A4-201ENST00000234256 ANKRD20A2Q5SQ80 823 aa18.02■□□□□ 0.48
SLC1A4-201ENST00000234256 ANKRD20A1Q5TYW2 823 aa18.02■□□□□ 0.48
SLC1A4-201ENST00000234256 ACAD10Q6JQN1 1059 aa18.02■□□□□ 0.48
SLC1A4-201ENST00000234256 LVRNQ6Q4G3 990 aa18.02■□□□□ 0.48
SLC1A4-201ENST00000234256 SGSM3Q96HU1 749 aa18.02■□□□□ 0.48
SLC1A4-201ENST00000234256 CCDC138Q96M89 665 aa18.02■□□□□ 0.48
SLC1A4-201ENST00000234256 UPF3AQ9H1J1 476 aaKnown RBP18.02■□□□□ 0.48
SLC1A4-201ENST00000234256 LOC100653049A0A140TA62 436 aa18.02■□□□□ 0.47
SLC1A4-201ENST00000234256 NEMP1O14524 444 aa18.02■□□□□ 0.47
SLC1A4-201ENST00000234256 CSDE1O75534 798 aaKnown RBP18.02■□□□□ 0.47
SLC1A4-201ENST00000234256 KRT34O76011 436 aa18.02■□□□□ 0.47
SLC1A4-201ENST00000234256 AP3M2P53677 418 aa18.02■□□□□ 0.47
SLC1A4-201ENST00000234256 ESRRGP62508 458 aa18.02■□□□□ 0.47
SLC1A4-201ENST00000234256 NSUN2Q08J23 767 aaKnown RBP eCLIP18.02■□□□□ 0.47
SLC1A4-201ENST00000234256 PIGHQ14442 188 aaPredicted RBP18.02■□□□□ 0.47
SLC1A4-201ENST00000234256 FOXR1Q6PIV2 292 aa18.02■□□□□ 0.47
SLC1A4-201ENST00000234256 SV2AQ7L0J3 742 aa18.02■□□□□ 0.47
SLC1A4-201ENST00000234256 ZFPM1Q8IX07 1006 aa18.02■□□□□ 0.47
SLC1A4-201ENST00000234256 USP33Q8TEY7 942 aa18.02■□□□□ 0.47
SLC1A4-201ENST00000234256 ATXN3P54252 364 aaPredicted RBP18.01■□□□□ 0.47
SLC1A4-201ENST00000234256 TAP1Q03518 808 aa18.01■□□□□ 0.47
SLC1A4-201ENST00000234256 MEI1Q5TIA1 1274 aa18.01■□□□□ 0.47
SLC1A4-201ENST00000234256 DYNC1LI2O43237 492 aaPredicted RBP18.01■□□□□ 0.47
SLC1A4-201ENST00000234256 XPAP23025 273 aaPredicted RBP18.01■□□□□ 0.47
SLC1A4-201ENST00000234256 HNRNPH1P31943 449 aaKnown RBP18.01■□□□□ 0.47
SLC1A4-201ENST00000234256 MORF4L2Q15014 288 aa18.01■□□□□ 0.47
SLC1A4-201ENST00000234256 NIF3L1Q9GZT8 377 aa18.01■□□□□ 0.47
SLC1A4-201ENST00000234256 SLC40A1Q9NP59 571 aa18.01■□□□□ 0.47
SLC1A4-201ENST00000234256 ANKEF1Q9NU02 776 aa18.01■□□□□ 0.47
SLC1A4-201ENST00000234256 PSMC3IPQ9P2W1 217 aaPredicted RBP18.01■□□□□ 0.47
SLC1A4-201ENST00000234256 SMG5Q9UPR3 1016 aaKnown RBP18.01■□□□□ 0.47
SLC1A4-201ENST00000234256 FSCBQ5H9T9 825 aa18.01■□□□□ 0.47
SLC1A4-201ENST00000234256 EP400NLQ6ZTU2 488 aa18.01■□□□□ 0.47
SLC1A4-201ENST00000234256 ACAD11Q709F0 780 aa18.01■□□□□ 0.47
SLC1A4-201ENST00000234256 SLC35C1Q96A29 364 aa18.01■□□□□ 0.47
SLC1A4-201ENST00000234256 CLMNQ96JQ2 1002 aa18.01■□□□□ 0.47
SLC1A4-201ENST00000234256 ZDHHC15Q96MV8 337 aa18.01■□□□□ 0.47
SLC1A4-201ENST00000234256 RAB21Q9UL25 225 aa18.01■□□□□ 0.47
SLC1A4-201ENST00000234256 TYW5A2RUC4 315 aaKnown RBP18.01■□□□□ 0.47
SLC1A4-201ENST00000234256 SHCBP1LQ9BZQ2 653 aa18.01■□□□□ 0.47
SLC1A4-201ENST00000234256 KIF9Q9HAQ2 790 aa18.01■□□□□ 0.47
SLC1A4-201ENST00000234256 EML1O00423 815 aa18■□□□□ 0.47
SLC1A4-201ENST00000234256 P4HA2O15460 535 aa18■□□□□ 0.47
SLC1A4-201ENST00000234256 CAP2P40123 477 aa18■□□□□ 0.47
SLC1A4-201ENST00000234256 GMPSP49915 693 aaPredicted RBP18■□□□□ 0.47
SLC1A4-201ENST00000234256 RBP5P82980 135 aa18■□□□□ 0.47
SLC1A4-201ENST00000234256 ZNF200P98182 395 aaPredicted RBP18■□□□□ 0.47
SLC1A4-201ENST00000234256 PTK7Q13308 1070 aa18■□□□□ 0.47
SLC1A4-201ENST00000234256 MXD4Q14582 209 aaPredicted RBP18■□□□□ 0.47
SLC1A4-201ENST00000234256 SYDE1Q6ZW31 735 aaPredicted RBP18■□□□□ 0.47
SLC1A4-201ENST00000234256 NVLO15381 856 aaKnown RBP18■□□□□ 0.47
SLC1A4-201ENST00000234256 TMEM132DQ14C87 1099 aa18■□□□□ 0.47
SLC1A4-201ENST00000234256 COBLL1Q53SF7 1204 aa18■□□□□ 0.47
SLC1A4-201ENST00000234256 ATF7IP2Q5U623 682 aa18■□□□□ 0.47
SLC1A4-201ENST00000234256 KCNQ5Q9NR82 932 aa18■□□□□ 0.47
SLC1A4-201ENST00000234256 RCCD1A6NED2 376 aa18■□□□□ 0.47
SLC1A4-201ENST00000234256 EXTL3O43909 919 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms