RNA–Protein interactions for RNA: ENST00000637613.1

CHD2-228, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-228ENST00000637613 NBPF26B4DH59 902 aa7.91□□□□□ -1.14
CHD2-228ENST00000637613 PRSS12P56730 875 aa7.91□□□□□ -1.14
CHD2-228ENST00000637613 TSR1Q2NL82 804 aaKnown RBP7.91□□□□□ -1.14
CHD2-228ENST00000637613 ZNF697Q5TEC3 545 aa7.91□□□□□ -1.14
CHD2-228ENST00000637613 FAM198AQ9UFP1 575 aa7.91□□□□□ -1.14
CHD2-228ENST00000637613 C3orf80F5H4A9 247 aa7.9□□□□□ -1.14
CHD2-228ENST00000637613 MAP3K7O43318 606 aa7.9□□□□□ -1.14
CHD2-228ENST00000637613 CRIPAKQ8N1N5 446 aa7.9□□□□□ -1.14
CHD2-228ENST00000637613 ANKLE1Q8NAG6 615 aa7.9□□□□□ -1.14
CHD2-228ENST00000637613 DDX12PQ92771 950 aa7.9□□□□□ -1.14
CHD2-228ENST00000637613 TNFRSF10AO00220 468 aa7.89□□□□□ -1.15
CHD2-228ENST00000637613 GTPBP6O43824 516 aaPredicted RBP7.89□□□□□ -1.15
CHD2-228ENST00000637613 PNMA3Q9UL41 463 aa7.89□□□□□ -1.15
CHD2-228ENST00000637613 NBR1Q14596 966 aa7.88□□□□□ -1.15
CHD2-228ENST00000637613 DPYSL4O14531 572 aa7.87□□□□□ -1.15
CHD2-228ENST00000637613 CAMK2BQ13554 666 aa7.87□□□□□ -1.15
CHD2-228ENST00000637613 LIAT1Q6ZQX7 453 aa7.87□□□□□ -1.15
CHD2-228ENST00000637613 CERKQ8TCT0 537 aa7.87□□□□□ -1.15
CHD2-228ENST00000637613 C11orf95C9JLR9 678 aaPredicted RBP7.85□□□□□ -1.15
CHD2-228ENST00000637613 SLF2Q8IX21 1173 aa7.84□□□□□ -1.15
CHD2-228ENST00000637613 DACH1Q9UI36 760 aa7.84□□□□□ -1.15
CHD2-228ENST00000637613 NUDT18Q6ZVK8 323 aa7.83□□□□□ -1.16
CHD2-228ENST00000637613 PRR14Q9BWN1 585 aa7.83□□□□□ -1.16
CHD2-228ENST00000637613 GMPR2Q9P2T1 348 aaKnown RBP7.83□□□□□ -1.16
CHD2-228ENST00000637613 AVPP01185 164 aa7.82□□□□□ -1.16
CHD2-228ENST00000637613 LMOD2Q6P5Q4 547 aa7.82□□□□□ -1.16
CHD2-228ENST00000637613 PCDHB3Q9Y5E6 796 aa7.82□□□□□ -1.16
CHD2-228ENST00000637613 SWT1Q5T5J6 900 aaKnown RBP7.81□□□□□ -1.16
CHD2-228ENST00000637613 PPEF1O14829 653 aaPredicted RBP7.8□□□□□ -1.16
CHD2-228ENST00000637613 LCE2CQ5TA81 110 aa7.8□□□□□ -1.16
CHD2-228ENST00000637613 RBM27Q9P2N5 1060 aaKnown RBP7.8□□□□□ -1.16
CHD2-228ENST00000637613 FAM181BA6NEQ2 426 aa7.79□□□□□ -1.16
CHD2-228ENST00000637613 AXIN1O15169 862 aa7.79□□□□□ -1.16
CHD2-228ENST00000637613 S1PR4O95977 384 aa7.79□□□□□ -1.16
CHD2-228ENST00000637613 SLC4A3P48751 1232 aa7.79□□□□□ -1.16
CHD2-228ENST00000637613 BLOC1S3Q6QNY0 202 aa7.79□□□□□ -1.16
CHD2-228ENST00000637613 TLL1O43897 1013 aa7.78□□□□□ -1.16
CHD2-228ENST00000637613 CTC1Q2NKJ3 1217 aa7.78□□□□□ -1.16
CHD2-228ENST00000637613 PKD2L1Q9P0L9 805 aa7.78□□□□□ -1.16
CHD2-228ENST00000637613 TERTO14746 1132 aaKnown RBP7.76□□□□□ -1.17
CHD2-228ENST00000637613 SMCPP49901 116 aaPredicted RBP7.76□□□□□ -1.17
CHD2-228ENST00000637613 SUZ12Q15022 739 aaKnown RBP7.76□□□□□ -1.17
CHD2-228ENST00000637613 PDIA6Q15084 440 aa7.75□□□□□ -1.17
CHD2-228ENST00000637613 FOXC1Q12948 553 aa7.74□□□□□ -1.17
CHD2-228ENST00000637613 PLA2G2CQ5R387 149 aa7.74□□□□□ -1.17
CHD2-228ENST00000637613 CADPS2Q86UW7 1296 aa7.74□□□□□ -1.17
CHD2-228ENST00000637613 TOR4AQ9NXH8 423 aa7.74□□□□□ -1.17
CHD2-228ENST00000637613 PRIM1P49642 420 aaKnown RBP7.72□□□□□ -1.17
CHD2-228ENST00000637613 TTC13Q8NBP0 860 aa7.72□□□□□ -1.17
CHD2-228ENST00000637613 SPDYE16A6NNV3 312 aaPredicted RBP7.71□□□□□ -1.18
CHD2-228ENST00000637613 ADH1BP00325 375 aa7.71□□□□□ -1.18
CHD2-228ENST00000637613 CYP4X1Q8N118 509 aa7.69□□□□□ -1.18
CHD2-228ENST00000637613 TIMELESSQ9UNS1 1208 aa7.69□□□□□ -1.18
CHD2-228ENST00000637613 SNRPBP14678 240 aaKnown RBP7.68□□□□□ -1.18
CHD2-228ENST00000637613 SLC6A16Q9GZN6 736 aa7.68□□□□□ -1.18
CHD2-228ENST00000637613 CDHR5Q9HBB8 845 aa7.68□□□□□ -1.18
CHD2-228ENST00000637613 ACTN4O43707 911 aaKnown RBP7.67□□□□□ -1.18
CHD2-228ENST00000637613 RPIAP49247 311 aa7.67□□□□□ -1.18
CHD2-228ENST00000637613 TRIM47Q96LD4 638 aa7.67□□□□□ -1.18
CHD2-228ENST00000637613 EYA1Q99502 592 aa7.67□□□□□ -1.18
CHD2-228ENST00000637613 SENP2Q9HC62 589 aa7.67□□□□□ -1.18
CHD2-228ENST00000637613 GTF3C3Q9Y5Q9 886 aa7.67□□□□□ -1.18
CHD2-228ENST00000637613 LORP23490 312 aaPredicted RBP7.66□□□□□ -1.18
CHD2-228ENST00000637613 P3H3Q8IVL6 736 aa7.66□□□□□ -1.18
CHD2-228ENST00000637613 ZSCAN1Q8NBB4 408 aa7.66□□□□□ -1.18
CHD2-228ENST00000637613 ATP13A2Q9NQ11 1180 aa7.66□□□□□ -1.18
CHD2-228ENST00000637613 TMEM132AQ24JP5 1023 aa7.65□□□□□ -1.18
CHD2-228ENST00000637613 PADI6Q6TGC4 694 aa7.65□□□□□ -1.18
CHD2-228ENST00000637613 TULP1O00294 542 aaPredicted RBP7.64□□□□□ -1.19
CHD2-228ENST00000637613 NR1I2O75469 434 aa7.64□□□□□ -1.19
CHD2-228ENST00000637613 KMT5BQ4FZB7 885 aa7.64□□□□□ -1.19
CHD2-228ENST00000637613 CD2BP2O95400 341 aaKnown RBP7.63□□□□□ -1.19
CHD2-228ENST00000637613 SLC16A10Q8TF71 515 aa7.63□□□□□ -1.19
CHD2-228ENST00000637613 GRXCR2A6NFK2 248 aa7.62□□□□□ -1.19
CHD2-228ENST00000637613 ERICH6Q7L0X2 663 aa7.62□□□□□ -1.19
CHD2-228ENST00000637613 OSBPP22059 807 aa7.61□□□□□ -1.19
CHD2-228ENST00000637613 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.61□□□□□ -1.19
CHD2-228ENST00000637613 KIFC2Q96AC6 838 aa7.61□□□□□ -1.19
CHD2-228ENST00000637613 GMPRP36959 345 aa7.6□□□□□ -1.19
CHD2-228ENST00000637613 KCNV2Q8TDN2 545 aa7.6□□□□□ -1.19
CHD2-228ENST00000637613 NPDC1Q9NQX5 325 aaPredicted RBP7.6□□□□□ -1.19
CHD2-228ENST00000637613 TTC24A2A3L6 582 aaPredicted RBP7.59□□□□□ -1.19
CHD2-228ENST00000637613 CFHP08603 1231 aa7.58□□□□□ -1.2
CHD2-228ENST00000637613 DNAJB2P25686 324 aa7.58□□□□□ -1.2
CHD2-228ENST00000637613 SMPD1P17405 629 aa7.57□□□□□ -1.2
CHD2-228ENST00000637613 IRF7Q92985 503 aa7.57□□□□□ -1.2
CHD2-228ENST00000637613 NXF1Q9UBU9 619 aaKnown RBP7.57□□□□□ -1.2
CHD2-228ENST00000637613 SCUBE3Q8IX30 993 aa7.56□□□□□ -1.2
CHD2-228ENST00000637613 NPAS3Q8IXF0 933 aa7.56□□□□□ -1.2
CHD2-228ENST00000637613 SPSB2Q99619 263 aa7.56□□□□□ -1.2
CHD2-228ENST00000637613 TMEM134Q9H6X4 195 aa7.56□□□□□ -1.2
CHD2-228ENST00000637613 SNIP1Q8TAD8 396 aaKnown RBP7.54□□□□□ -1.2
CHD2-228ENST00000637613 WDR70Q9NW82 654 aa7.54□□□□□ -1.2
CHD2-228ENST00000637613 ARIH1Q9Y4X5 557 aaPredicted RBP7.54□□□□□ -1.2
CHD2-228ENST00000637613 FCF1Q9Y324 198 aaKnown RBP7.53□□□□□ -1.2
CHD2-228ENST00000637613 WNT7AO00755 349 aa7.52□□□□□ -1.21
CHD2-228ENST00000637613 ARHGEF1Q92888 912 aaKnown RBP7.52□□□□□ -1.21
CHD2-228ENST00000637613 SLC10A3P09131 477 aa7.5□□□□□ -1.21
CHD2-228ENST00000637613 KCNMA1Q12791 1236 aa7.5□□□□□ -1.21
CHD2-228ENST00000637613 KCTD17Q8N5Z5 321 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms