RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 CBX1P83916 185 aa16.64■□□□□ 0.25
CHD1-212ENST00000614616 TIGD1Q96MW7 591 aa16.64■□□□□ 0.25
CHD1-212ENST00000614616 BICD2Q8TD16 824 aa16.64■□□□□ 0.25
CHD1-212ENST00000614616 CNTLNQ9NXG0 1405 aa16.64■□□□□ 0.25
CHD1-212ENST00000614616 HDAC5Q9UQL6 1122 aa16.63■□□□□ 0.25
CHD1-212ENST00000614616 INTS3Q68E01 1043 aaKnown RBP16.63■□□□□ 0.25
CHD1-212ENST00000614616 GOLGA6L7A0A1B0GV03 622 aa16.63■□□□□ 0.25
CHD1-212ENST00000614616 STK11IPQ8N1F8 1099 aa16.63■□□□□ 0.25
CHD1-212ENST00000614616 TRIM5Q9C035 493 aa16.63■□□□□ 0.25
CHD1-212ENST00000614616 DDX19BQ9UMR2 479 aa16.62■□□□□ 0.25
CHD1-212ENST00000614616 U2AF1L5P0DN76 240 aaPredicted RBP16.62■□□□□ 0.25
CHD1-212ENST00000614616 U2AF1Q01081 240 aaKnown RBP eCLIP16.62■□□□□ 0.25
CHD1-212ENST00000614616 RNF214Q8ND24 703 aa16.62■□□□□ 0.25
CHD1-212ENST00000614616 CHMP4AQ9BY43 222 aa16.62■□□□□ 0.25
CHD1-212ENST00000614616 ZKSCAN2Q63HK3 967 aa16.62■□□□□ 0.25
CHD1-212ENST00000614616 C14orf37Q86TY3 774 aa16.62■□□□□ 0.25
CHD1-212ENST00000614616 RASSF8Q8NHQ8 419 aa16.62■□□□□ 0.25
CHD1-212ENST00000614616 ZRSR2Q15696 482 aaKnown RBP16.62■□□□□ 0.25
CHD1-212ENST00000614616 FAM107BQ9H098 131 aa16.61■□□□□ 0.25
CHD1-212ENST00000614616 BCL11BQ9C0K0 894 aaPredicted RBP16.61■□□□□ 0.25
CHD1-212ENST00000614616 KIF7Q2M1P5 1343 aa16.61■□□□□ 0.25
CHD1-212ENST00000614616 CCDC146Q8IYE0 955 aa16.61■□□□□ 0.25
CHD1-212ENST00000614616 ROCK1Q13464 1354 aa16.61■□□□□ 0.25
CHD1-212ENST00000614616 MYO6Q9UM54 1294 aa16.61■□□□□ 0.25
CHD1-212ENST00000614616 NGEFQ8N5V2 710 aa16.6■□□□□ 0.25
CHD1-212ENST00000614616 CHMP3Q9Y3E7 222 aa16.6■□□□□ 0.25
CHD1-212ENST00000614616 ANKRD30AQ9BXX3 1397 aa16.6■□□□□ 0.25
CHD1-212ENST00000614616 AXDND1Q5T1B0 1012 aaPredicted RBP16.59■□□□□ 0.25
CHD1-212ENST00000614616 GPATCH11Q8N954 259 aa16.59■□□□□ 0.25
CHD1-212ENST00000614616 MPHOSPH9Q99550 1183 aa16.59■□□□□ 0.25
CHD1-212ENST00000614616 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.59■□□□□ 0.25
CHD1-212ENST00000614616 RILPL2Q969X0 211 aa16.59■□□□□ 0.25
CHD1-212ENST00000614616 CAGE1Q8TC20 777 aa16.59■□□□□ 0.25
CHD1-212ENST00000614616 CT47B1P0C2W7 299 aaPredicted RBP16.58■□□□□ 0.25
CHD1-212ENST00000614616 SOGA1O94964 1423 aa16.58■□□□□ 0.24
CHD1-212ENST00000614616 ERLIN1O75477 346 aa16.58■□□□□ 0.24
CHD1-212ENST00000614616 PLCD4Q9BRC7 762 aa16.58■□□□□ 0.24
CHD1-212ENST00000614616 CWC22Q9HCG8 908 aaKnown RBP16.58■□□□□ 0.24
CHD1-212ENST00000614616 POGKQ9P215 609 aa16.58■□□□□ 0.24
CHD1-212ENST00000614616 SMC3Q9UQE7 1217 aa16.58■□□□□ 0.24
CHD1-212ENST00000614616 GTPBP4Q9BZE4 634 aaKnown RBP16.58■□□□□ 0.24
CHD1-212ENST00000614616 CCDC18Q5T9S5 1454 aa16.57■□□□□ 0.24
CHD1-212ENST00000614616 SPAG9O60271 1321 aaKnown RBP16.57■□□□□ 0.24
CHD1-212ENST00000614616 MCM2P49736 904 aa16.57■□□□□ 0.24
CHD1-212ENST00000614616 GTF2A1P52655 376 aaPredicted RBP16.57■□□□□ 0.24
CHD1-212ENST00000614616 GORABQ5T7V8 394 aa16.57■□□□□ 0.24
CHD1-212ENST00000614616 GOLGA6L10A6NI86 522 aa16.57■□□□□ 0.24
CHD1-212ENST00000614616 SPC24Q8NBT2 197 aa16.57■□□□□ 0.24
CHD1-212ENST00000614616 AKNAQ7Z591 1439 aa16.57■□□□□ 0.24
CHD1-212ENST00000614616 WIZO95785 1651 aa16.56■□□□□ 0.24
CHD1-212ENST00000614616 MCM4P33991 863 aa16.56■□□□□ 0.24
CHD1-212ENST00000614616 RUFY2Q8WXA3 655 aa16.56■□□□□ 0.24
CHD1-212ENST00000614616 COG6Q9Y2V7 657 aa16.56■□□□□ 0.24
CHD1-212ENST00000614616 KANK1Q14678 1352 aa16.55■□□□□ 0.24
CHD1-212ENST00000614616 OLFM4Q6UX06 510 aa16.55■□□□□ 0.24
CHD1-212ENST00000614616 SMG6Q86US8 1419 aaKnown RBP16.55■□□□□ 0.24
CHD1-212ENST00000614616 CCDC192P0DO97 292 aa16.55■□□□□ 0.24
CHD1-212ENST00000614616 MCM5P33992 734 aa16.55■□□□□ 0.24
CHD1-212ENST00000614616 PPP4R3BQ5MIZ7 849 aa16.55■□□□□ 0.24
CHD1-212ENST00000614616 LMOD3Q0VAK6 560 aa16.55■□□□□ 0.24
CHD1-212ENST00000614616 CCDC73Q6ZRK6 1079 aa16.55■□□□□ 0.24
CHD1-212ENST00000614616 STK31Q9BXU1 1019 aa16.54■□□□□ 0.24
CHD1-212ENST00000614616 PLEKHD1A6NEE1 506 aa16.54■□□□□ 0.24
CHD1-212ENST00000614616 NBPF1Q3BBV0 1214 aa16.54■□□□□ 0.24
CHD1-212ENST00000614616 CIZ1Q9ULV3 898 aaPredicted RBP16.54■□□□□ 0.24
CHD1-212ENST00000614616 PRPF40AO75400 957 aaKnown RBP16.53■□□□□ 0.24
CHD1-212ENST00000614616 ZKSCAN1P17029 563 aaPredicted RBP16.53■□□□□ 0.24
CHD1-212ENST00000614616 PCMTD1Q96MG8 357 aaPredicted RBP16.53■□□□□ 0.24
CHD1-212ENST00000614616 USP47Q96K76 1375 aa16.52■□□□□ 0.23
CHD1-212ENST00000614616 KIF2AO00139 706 aaPredicted RBP16.52■□□□□ 0.23
CHD1-212ENST00000614616 CLCN1P35523 988 aa16.52■□□□□ 0.23
CHD1-212ENST00000614616 NEFHP12036 1026 aa16.51■□□□□ 0.23
CHD1-212ENST00000614616 NINLQ9Y2I6 1382 aa16.51■□□□□ 0.23
CHD1-212ENST00000614616 NPHP1O15259 732 aa16.5■□□□□ 0.23
CHD1-212ENST00000614616 SKIDA1Q1XH10 827 aa16.5■□□□□ 0.23
CHD1-212ENST00000614616 RABEP1Q15276 862 aa16.5■□□□□ 0.23
CHD1-212ENST00000614616 FOXD1Q16676 465 aa16.5■□□□□ 0.23
CHD1-212ENST00000614616 SMARCE1Q969G3 411 aa16.5■□□□□ 0.23
CHD1-212ENST00000614616 KAT6BQ8WYB5 2073 aa16.5■□□□□ 0.23
CHD1-212ENST00000614616 CTR9Q6PD62 1173 aa16.5■□□□□ 0.23
CHD1-212ENST00000614616 LRRCC1Q9C099 1032 aa16.5■□□□□ 0.23
CHD1-212ENST00000614616 VPS37CA5D8V6 355 aaPredicted RBP16.49■□□□□ 0.23
CHD1-212ENST00000614616 SRPK2P78362 688 aaKnown RBP16.49■□□□□ 0.23
CHD1-212ENST00000614616 PDILTQ8N807 584 aa16.49■□□□□ 0.23
CHD1-212ENST00000614616 BRD4O60885 1362 aaPredicted RBP16.49■□□□□ 0.23
CHD1-212ENST00000614616 PDIA4P13667 645 aaKnown RBP16.49■□□□□ 0.23
CHD1-212ENST00000614616 NEXNQ0ZGT2 675 aa16.49■□□□□ 0.23
CHD1-212ENST00000614616 TMCO3Q6UWJ1 677 aa16.49■□□□□ 0.23
CHD1-212ENST00000614616 SMC2O95347 1197 aa16.49■□□□□ 0.23
CHD1-212ENST00000614616 L3MBTL2Q969R5 705 aa16.49■□□□□ 0.23
CHD1-212ENST00000614616 IQCEQ6IPM2 695 aa16.48■□□□□ 0.23
CHD1-212ENST00000614616 PRIMPOLQ96LW4 560 aa16.48■□□□□ 0.23
CHD1-212ENST00000614616 NACADO15069 1562 aa16.48■□□□□ 0.23
CHD1-212ENST00000614616 CENPHQ9H3R5 247 aa16.48■□□□□ 0.23
CHD1-212ENST00000614616 DZIP1LQ8IYY4 767 aaKnown RBP16.48■□□□□ 0.23
CHD1-212ENST00000614616 ANO2Q9NQ90 1003 aa16.48■□□□□ 0.23
CHD1-212ENST00000614616 KANK4Q5T7N3 995 aaPredicted RBP16.47■□□□□ 0.23
CHD1-212ENST00000614616 SMAP1Q8IYB5 467 aaPredicted RBP16.47■□□□□ 0.23
CHD1-212ENST00000614616 CDC45O75419 566 aa16.47■□□□□ 0.23
CHD1-212ENST00000614616 TRIM29Q14134 588 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms