RNA–Protein interactions for RNA: ENST00000610452.1

COL15A1-205, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL15A1, Length 5,422 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-205ENST00000610452 PDCL2Q8N4E4 241 aa24.52■■□□□ 1.52
COL15A1-205ENST00000610452 STK31Q9BXU1 1019 aa24.52■■□□□ 1.52
COL15A1-205ENST00000610452 DDX19BQ9UMR2 479 aa24.52■■□□□ 1.52
COL15A1-205ENST00000610452 TAF7LQ5H9L4 462 aa24.52■■□□□ 1.52
COL15A1-205ENST00000610452 MCM4P33991 863 aa24.51■■□□□ 1.51
COL15A1-205ENST00000610452 ERICH4A6NGS2 130 aa24.51■■□□□ 1.51
COL15A1-205ENST00000610452 CBX1P83916 185 aa24.51■■□□□ 1.51
COL15A1-205ENST00000610452 RASSF8Q8NHQ8 419 aa24.51■■□□□ 1.51
COL15A1-205ENST00000610452 PRPF40AO75400 957 aaKnown RBP24.5■■□□□ 1.51
COL15A1-205ENST00000610452 DEF6Q9H4E7 631 aa24.5■■□□□ 1.51
COL15A1-205ENST00000610452 NPHP1O15259 732 aa24.5■■□□□ 1.51
COL15A1-205ENST00000610452 AEBP1Q8IUX7 1158 aa24.5■■□□□ 1.51
COL15A1-205ENST00000610452 CCDC112Q8NEF3 446 aa24.5■■□□□ 1.51
COL15A1-205ENST00000610452 LETM1O95202 739 aaPredicted RBP24.49■■□□□ 1.51
COL15A1-205ENST00000610452 HSP90AB3PQ58FF7 597 aa24.49■■□□□ 1.51
COL15A1-205ENST00000610452 IPO7O95373 1038 aaKnown RBP24.49■■□□□ 1.51
COL15A1-205ENST00000610452 RRP12Q5JTH9 1297 aaKnown RBP24.49■■□□□ 1.51
COL15A1-205ENST00000610452 ERCC4Q92889 916 aaPredicted RBP24.49■■□□□ 1.51
COL15A1-205ENST00000610452 TSPYL1Q9H0U9 437 aa24.49■■□□□ 1.51
COL15A1-205ENST00000610452 CCDC191Q8NCU4 936 aa24.48■■□□□ 1.51
COL15A1-205ENST00000610452 TRIM5Q9C035 493 aa24.48■■□□□ 1.51
COL15A1-205ENST00000610452 EIF3AQ14152 1382 aaKnown RBP24.47■■□□□ 1.51
COL15A1-205ENST00000610452 CGNQ9P2M7 1197 aaKnown RBP24.47■■□□□ 1.51
COL15A1-205ENST00000610452 VPS37CA5D8V6 355 aaPredicted RBP24.46■■□□□ 1.51
COL15A1-205ENST00000610452 CDR1P51861 262 aa24.46■■□□□ 1.51
COL15A1-205ENST00000610452 SAFB2Q14151 953 aaKnown RBP eCLIP24.46■■□□□ 1.51
COL15A1-205ENST00000610452 SMC3Q9UQE7 1217 aa24.46■■□□□ 1.51
COL15A1-205ENST00000610452 DZIP1LQ8IYY4 767 aaKnown RBP24.46■■□□□ 1.51
COL15A1-205ENST00000610452 PANK3Q9H999 370 aa24.46■■□□□ 1.51
COL15A1-205ENST00000610452 ST20-MTHFSA0A0A6YYL1 179 aa24.45■■□□□ 1.5
COL15A1-205ENST00000610452 APAF1O14727 1248 aa24.45■■□□□ 1.5
COL15A1-205ENST00000610452 RUSC2Q8N2Y8 1516 aa24.45■■□□□ 1.5
COL15A1-205ENST00000610452 GORABQ5T7V8 394 aa24.45■■□□□ 1.5
COL15A1-205ENST00000610452 INTS3Q68E01 1043 aaKnown RBP24.45■■□□□ 1.5
COL15A1-205ENST00000610452 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.45■■□□□ 1.5
COL15A1-205ENST00000610452 AAMPQ13685 434 aa24.45■■□□□ 1.5
COL15A1-205ENST00000610452 KANK1Q14678 1352 aa24.44■■□□□ 1.5
COL15A1-205ENST00000610452 CHMP4CQ96CF2 233 aa24.44■■□□□ 1.5
COL15A1-205ENST00000610452 BBXQ8WY36 941 aaPredicted RBP24.43■■□□□ 1.5
COL15A1-205ENST00000610452 ANKRD30AQ9BXX3 1397 aa24.43■■□□□ 1.5
COL15A1-205ENST00000610452 CEP89Q96ST8 783 aa24.43■■□□□ 1.5
COL15A1-205ENST00000610452 LNPKQ9C0E8 428 aa24.43■■□□□ 1.5
COL15A1-205ENST00000610452 MPNDQ8N594 471 aa24.42■■□□□ 1.5
COL15A1-205ENST00000610452 WIZO95785 1651 aa24.42■■□□□ 1.5
COL15A1-205ENST00000610452 SPC24Q8NBT2 197 aa24.42■■□□□ 1.5
COL15A1-205ENST00000610452 USP8P40818 1118 aa24.41■■□□□ 1.5
COL15A1-205ENST00000610452 HDGFL2Q7Z4V5 671 aaPredicted RBP24.41■■□□□ 1.5
COL15A1-205ENST00000610452 HDAC5Q9UQL6 1122 aa24.41■■□□□ 1.5
COL15A1-205ENST00000610452 FBXW7Q969H0 707 aa24.4■■□□□ 1.5
COL15A1-205ENST00000610452 SOX12O15370 315 aa24.4■■□□□ 1.5
COL15A1-205ENST00000610452 ANO2Q9NQ90 1003 aa24.4■■□□□ 1.5
COL15A1-205ENST00000610452 FHOD3Q2V2M9 1422 aa24.4■■□□□ 1.5
COL15A1-205ENST00000610452 CCDC73Q6ZRK6 1079 aa24.39■■□□□ 1.5
COL15A1-205ENST00000610452 DCTN1Q14203 1278 aa24.39■■□□□ 1.49
COL15A1-205ENST00000610452 AKNAQ7Z591 1439 aa24.38■■□□□ 1.49
COL15A1-205ENST00000610452 CNTLNQ9NXG0 1405 aa24.38■■□□□ 1.49
COL15A1-205ENST00000610452 ZKSCAN1P17029 563 aaPredicted RBP24.38■■□□□ 1.49
COL15A1-205ENST00000610452 CALCOCO1Q9P1Z2 691 aa24.38■■□□□ 1.49
COL15A1-205ENST00000610452 NGEFQ8N5V2 710 aa24.38■■□□□ 1.49
COL15A1-205ENST00000610452 TOP2AP11388 1531 aaKnown RBP24.37■■□□□ 1.49
COL15A1-205ENST00000610452 PANK1Q8TE04 598 aa24.37■■□□□ 1.49
COL15A1-205ENST00000610452 NAT10Q9H0A0 1025 aaKnown RBP24.37■■□□□ 1.49
COL15A1-205ENST00000610452 CDC45O75419 566 aa24.36■■□□□ 1.49
COL15A1-205ENST00000610452 SKIDA1Q1XH10 827 aa24.36■■□□□ 1.49
COL15A1-205ENST00000610452 ANKRD20A12PQ8NF67 263 aa24.36■■□□□ 1.49
COL15A1-205ENST00000610452 CCDC7Q96M83 1385 aa24.35■■□□□ 1.49
COL15A1-205ENST00000610452 LMOD3Q0VAK6 560 aa24.35■■□□□ 1.49
COL15A1-205ENST00000610452 CCP110O43303 1012 aa24.35■■□□□ 1.49
COL15A1-205ENST00000610452 SPAG9O60271 1321 aaKnown RBP24.35■■□□□ 1.49
COL15A1-205ENST00000610452 CHMP4AQ9BY43 222 aa24.34■■□□□ 1.49
COL15A1-205ENST00000610452 USP47Q96K76 1375 aa24.34■■□□□ 1.49
COL15A1-205ENST00000610452 RUFY2Q8WXA3 655 aa24.34■■□□□ 1.49
COL15A1-205ENST00000610452 AXDND1Q5T1B0 1012 aaPredicted RBP24.33■■□□□ 1.49
COL15A1-205ENST00000610452 ELL2O00472 640 aaPredicted RBP24.33■■□□□ 1.49
COL15A1-205ENST00000610452 KIAA0754O94854 1291 aa24.32■■□□□ 1.48
COL15A1-205ENST00000610452 PLCD4Q9BRC7 762 aa24.31■■□□□ 1.48
COL15A1-205ENST00000610452 CIZ1Q9ULV3 898 aaPredicted RBP24.31■■□□□ 1.48
COL15A1-205ENST00000610452 PCMTD1Q96MG8 357 aaPredicted RBP24.31■■□□□ 1.48
COL15A1-205ENST00000610452 STK26Q9P289 416 aa24.31■■□□□ 1.48
COL15A1-205ENST00000610452 HOOK1Q9UJC3 728 aaKnown RBP24.3■■□□□ 1.48
COL15A1-205ENST00000610452 XPCQ01831 940 aaPredicted RBP24.3■■□□□ 1.48
COL15A1-205ENST00000610452 PDZRN3Q9UPQ7 1066 aa24.3■■□□□ 1.48
COL15A1-205ENST00000610452 NCBP3Q53F19 620 aaKnown RBP24.3■■□□□ 1.48
COL15A1-205ENST00000610452 RABEP1Q15276 862 aa24.29■■□□□ 1.48
COL15A1-205ENST00000610452 PDILTQ8N807 584 aa24.29■■□□□ 1.48
COL15A1-205ENST00000610452 CDCA7LQ96GN5 454 aa24.29■■□□□ 1.48
COL15A1-205ENST00000610452 CLCN1P35523 988 aa24.28■■□□□ 1.48
COL15A1-205ENST00000610452 KIF7Q2M1P5 1343 aa24.28■■□□□ 1.48
COL15A1-205ENST00000610452 TRERF1Q96PN7 1200 aa24.27■■□□□ 1.48
COL15A1-205ENST00000610452 TDRD9Q8NDG6 1382 aaKnown RBP24.27■■□□□ 1.48
COL15A1-205ENST00000610452 EIF3JO75822 258 aaKnown RBP24.27■■□□□ 1.48
COL15A1-205ENST00000610452 CWC22Q9HCG8 908 aaKnown RBP24.27■■□□□ 1.48
COL15A1-205ENST00000610452 CCDC18Q5T9S5 1454 aa24.26■■□□□ 1.47
COL15A1-205ENST00000610452 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.26■■□□□ 1.47
COL15A1-205ENST00000610452 CAGE1Q8TC20 777 aa24.26■■□□□ 1.47
COL15A1-205ENST00000610452 CT47B1P0C2W7 299 aaPredicted RBP24.25■■□□□ 1.47
COL15A1-205ENST00000610452 SMC2O95347 1197 aa24.25■■□□□ 1.47
COL15A1-205ENST00000610452 SDF4Q9BRK5 362 aa24.25■■□□□ 1.47
COL15A1-205ENST00000610452 DYNC1I1O14576 645 aa24.25■■□□□ 1.47
COL15A1-205ENST00000610452 CCDC192P0DO97 292 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms