RNA–Protein interactions for RNA: ENST00000608220.5

LINC00343-210, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 806 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-210ENST00000608220 MTRQ99707 1265 aa8.91□□□□□ -0.98
LINC00343-210ENST00000608220 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.9□□□□□ -0.98
LINC00343-210ENST00000608220 GPR37O15354 613 aa8.9□□□□□ -0.98
LINC00343-210ENST00000608220 PXYLP1Q8TE99 480 aa8.9□□□□□ -0.98
LINC00343-210ENST00000608220 CCDC180Q9P1Z9 1646 aa8.9□□□□□ -0.99
LINC00343-210ENST00000608220 TJAP1Q5JTD0 557 aa8.89□□□□□ -0.99
LINC00343-210ENST00000608220 METTL3Q86U44 580 aaKnown RBP8.89□□□□□ -0.99
LINC00343-210ENST00000608220 IL21Q9HBE4 155 aa8.89□□□□□ -0.99
LINC00343-210ENST00000608220 COPS2P61201 443 aa8.88□□□□□ -0.99
LINC00343-210ENST00000608220 PRR14Q9BWN1 585 aa8.88□□□□□ -0.99
LINC00343-210ENST00000608220 ZNF516Q92618 1163 aa8.86□□□□□ -0.99
LINC00343-210ENST00000608220 CFHP08603 1231 aa8.85□□□□□ -0.99
LINC00343-210ENST00000608220 KMT5BQ4FZB7 885 aa8.85□□□□□ -0.99
LINC00343-210ENST00000608220 NLRP7Q8WX94 980 aa8.85□□□□□ -0.99
LINC00343-210ENST00000608220 PCDHB3Q9Y5E6 796 aa8.85□□□□□ -0.99
LINC00343-210ENST00000608220 RGS20O76081 388 aa8.84□□□□□ -0.99
LINC00343-210ENST00000608220 RSPH4AQ5TD94 716 aa8.84□□□□□ -0.99
LINC00343-210ENST00000608220 SLC10A3P09131 477 aa8.83□□□□□ -1
LINC00343-210ENST00000608220 RDH13Q8NBN7 331 aa8.82□□□□□ -1
LINC00343-210ENST00000608220 ABCC9O60706 1549 aa8.81□□□□□ -1
LINC00343-210ENST00000608220 BLOC1S3Q6QNY0 202 aa8.81□□□□□ -1
LINC00343-210ENST00000608220 NKX2-3Q8TAU0 364 aa8.81□□□□□ -1
LINC00343-210ENST00000608220 DAXXQ9UER7 740 aaPredicted RBP8.81□□□□□ -1
LINC00343-210ENST00000608220 DDX11L8A8MPP1 907 aa8.8□□□□□ -1
LINC00343-210ENST00000608220 ACTN4O43707 911 aaKnown RBP8.8□□□□□ -1
LINC00343-210ENST00000608220 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.8□□□□□ -1
LINC00343-210ENST00000608220 ZPR1O75312 459 aa8.79□□□□□ -1
LINC00343-210ENST00000608220 MAP2K5Q13163 448 aa8.79□□□□□ -1
LINC00343-210ENST00000608220 PHOX2BQ99453 314 aa8.79□□□□□ -1
LINC00343-210ENST00000608220 PPP1R18Q6NYC8 613 aa8.78□□□□□ -1
LINC00343-210ENST00000608220 LMOD2Q6P5Q4 547 aa8.78□□□□□ -1
LINC00343-210ENST00000608220 IRF6O14896 467 aa8.76□□□□□ -1.01
LINC00343-210ENST00000608220 GGCXP38435 758 aa8.76□□□□□ -1.01
LINC00343-210ENST00000608220 SULF1Q8IWU6 871 aa8.76□□□□□ -1.01
LINC00343-210ENST00000608220 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.76□□□□□ -1.01
LINC00343-210ENST00000608220 MINK1Q8N4C8 1332 aaPredicted RBP8.76□□□□□ -1.01
LINC00343-210ENST00000608220 NR1I2O75469 434 aa8.75□□□□□ -1.01
LINC00343-210ENST00000608220 PUS10Q3MIT2 529 aaKnown RBP8.75□□□□□ -1.01
LINC00343-210ENST00000608220 KRI1Q8N9T8 703 aaKnown RBP8.75□□□□□ -1.01
LINC00343-210ENST00000608220 IRX2Q9BZI1 471 aaPredicted RBP8.75□□□□□ -1.01
LINC00343-210ENST00000608220 TLL1O43897 1013 aa8.74□□□□□ -1.01
LINC00343-210ENST00000608220 MDM2Q00987 491 aaPredicted RBP8.73□□□□□ -1.01
LINC00343-210ENST00000608220 CCDC102AQ96A19 550 aa8.73□□□□□ -1.01
LINC00343-210ENST00000608220 PRKD2Q9BZL6 878 aa8.72□□□□□ -1.01
LINC00343-210ENST00000608220 GCGRP47871 477 aa8.71□□□□□ -1.02
LINC00343-210ENST00000608220 SCUBE3Q8IX30 993 aa8.71□□□□□ -1.02
LINC00343-210ENST00000608220 FUT2Q10981 343 aa8.7□□□□□ -1.02
LINC00343-210ENST00000608220 TMUB1Q9BVT8 246 aa8.69□□□□□ -1.02
LINC00343-210ENST00000608220 S1PR4O95977 384 aa8.68□□□□□ -1.02
LINC00343-210ENST00000608220 ADH1BP00325 375 aa8.68□□□□□ -1.02
LINC00343-210ENST00000608220 ATP6V1AP38606 617 aa8.68□□□□□ -1.02
LINC00343-210ENST00000608220 RNF223E7ERA6 249 aa8.67□□□□□ -1.02
LINC00343-210ENST00000608220 MORN1Q5T089 497 aa8.67□□□□□ -1.02
LINC00343-210ENST00000608220 ZC3H15Q8WU90 426 aaKnown RBP8.67□□□□□ -1.02
LINC00343-210ENST00000608220 PPEF1O14829 653 aaPredicted RBP8.66□□□□□ -1.02
LINC00343-210ENST00000608220 CLCN1P35523 988 aa8.66□□□□□ -1.02
LINC00343-210ENST00000608220 GRIPAP1Q4V328 841 aa8.66□□□□□ -1.02
LINC00343-210ENST00000608220 BARGINQ6ZT62 677 aa8.66□□□□□ -1.02
LINC00343-210ENST00000608220 SPSB2Q99619 263 aa8.66□□□□□ -1.02
LINC00343-210ENST00000608220 SLC6A16Q9GZN6 736 aa8.66□□□□□ -1.02
LINC00343-210ENST00000608220 ZMYND10O75800 440 aa8.65□□□□□ -1.02
LINC00343-210ENST00000608220 CD46P15529 392 aa8.65□□□□□ -1.02
LINC00343-210ENST00000608220 GPCPD1Q9NPB8 672 aa8.65□□□□□ -1.02
LINC00343-210ENST00000608220 SLC27A5Q9Y2P5 690 aa8.65□□□□□ -1.02
LINC00343-210ENST00000608220 V9GY48 417 aaPredicted RBP8.65□□□□□ -1.02
LINC00343-210ENST00000608220 FMNL1O95466 1100 aaPredicted RBP8.63□□□□□ -1.03
LINC00343-210ENST00000608220 GFRA3O60609 400 aa8.62□□□□□ -1.03
LINC00343-210ENST00000608220 KDM4AO75164 1064 aa8.62□□□□□ -1.03
LINC00343-210ENST00000608220 SLC19A1P41440 591 aa8.62□□□□□ -1.03
LINC00343-210ENST00000608220 TTLL12Q14166 644 aaPredicted RBP8.62□□□□□ -1.03
LINC00343-210ENST00000608220 ANKLE1Q8NAG6 615 aa8.62□□□□□ -1.03
LINC00343-210ENST00000608220 Q6ZNB5 142 aa8.6□□□□□ -1.03
LINC00343-210ENST00000608220 FAM217BQ9NTX9 383 aaPredicted RBP8.6□□□□□ -1.03
LINC00343-210ENST00000608220 NUTM1Q86Y26 1132 aa8.59□□□□□ -1.03
LINC00343-210ENST00000608220 THAP11Q96EK4 314 aa8.59□□□□□ -1.03
LINC00343-210ENST00000608220 USP46P62068 366 aa8.58□□□□□ -1.04
LINC00343-210ENST00000608220 LAPTM4AQ15012 233 aa8.58□□□□□ -1.04
LINC00343-210ENST00000608220 Q3C1V9 767 aa8.58□□□□□ -1.04
LINC00343-210ENST00000608220 BRICD5Q6PL45 260 aa8.58□□□□□ -1.04
LINC00343-210ENST00000608220 RNF19BQ6ZMZ0 732 aa8.58□□□□□ -1.04
LINC00343-210ENST00000608220 REPIN1Q9BWE0 567 aaKnown RBP8.58□□□□□ -1.04
LINC00343-210ENST00000608220 SSTR3P32745 418 aaPredicted RBP8.57□□□□□ -1.04
LINC00343-210ENST00000608220 FAM160A2Q8N612 972 aaPredicted RBP8.57□□□□□ -1.04
LINC00343-210ENST00000608220 HLA-CQ95604 372 aa8.57□□□□□ -1.04
LINC00343-210ENST00000608220 PDZRN3Q9UPQ7 1066 aa8.57□□□□□ -1.04
LINC00343-210ENST00000608220 SALL2Q9Y467 1007 aaPredicted RBP8.57□□□□□ -1.04
LINC00343-210ENST00000608220 SLC24A1O60721 1099 aa8.56□□□□□ -1.04
LINC00343-210ENST00000608220 LIAT1Q6ZQX7 453 aa8.56□□□□□ -1.04
LINC00343-210ENST00000608220 EMID1Q96A84 441 aaPredicted RBP8.56□□□□□ -1.04
LINC00343-210ENST00000608220 HOXA2O43364 376 aa8.55□□□□□ -1.04
LINC00343-210ENST00000608220 AMHR2Q16671 573 aa8.55□□□□□ -1.04
LINC00343-210ENST00000608220 SPRYD7Q5W111 196 aa8.55□□□□□ -1.04
LINC00343-210ENST00000608220 PRDM9Q9NQV7 894 aa8.55□□□□□ -1.04
LINC00343-210ENST00000608220 FCF1Q9Y324 198 aaKnown RBP8.55□□□□□ -1.04
LINC00343-210ENST00000608220 GUCA2AQ02747 115 aa8.54□□□□□ -1.04
LINC00343-210ENST00000608220 PLA2G2CQ5R387 149 aa8.54□□□□□ -1.04
LINC00343-210ENST00000608220 GIGYF2Q6Y7W6 1299 aaKnown RBP8.54□□□□□ -1.04
LINC00343-210ENST00000608220 AK7Q96M32 723 aa8.54□□□□□ -1.04
LINC00343-210ENST00000608220 NRG2O14511 850 aaPredicted RBP8.53□□□□□ -1.04
LINC00343-210ENST00000608220 TRIM66O15016 1216 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms