RNA–Protein interactions for RNA: ENST00000607772.5

CNKSR3-205, Transcript of CNKSR family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNKSR3, Length 21,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-205ENST00000607772 TRIM6-TRIM34B2RNG4 842 aa8.61□□□□□ -1.03
CNKSR3-205ENST00000607772 KIAA0754O94854 1291 aa8.61□□□□□ -1.03
CNKSR3-205ENST00000607772 RALBP1Q15311 655 aa8.61□□□□□ -1.03
CNKSR3-205ENST00000607772 PAK3O75914 559 aaPredicted RBP8.6□□□□□ -1.03
CNKSR3-205ENST00000607772 ZHX1Q9UKY1 873 aaPredicted RBP8.6□□□□□ -1.03
CNKSR3-205ENST00000607772 KANK1Q14678 1352 aa8.6□□□□□ -1.03
CNKSR3-205ENST00000607772 PDE3BQ13370 1112 aa8.6□□□□□ -1.03
CNKSR3-205ENST00000607772 MEX3CQ5U5Q3 659 aaKnown RBP8.6□□□□□ -1.03
CNKSR3-205ENST00000607772 CCDC9Q9Y3X0 531 aaKnown RBP8.6□□□□□ -1.03
CNKSR3-205ENST00000607772 GGT6Q6P531 493 aa8.6□□□□□ -1.03
CNKSR3-205ENST00000607772 HOMER1Q86YM7 354 aa8.6□□□□□ -1.03
CNKSR3-205ENST00000607772 MNS1Q8NEH6 495 aa8.6□□□□□ -1.03
CNKSR3-205ENST00000607772 ATP6V1DQ9Y5K8 247 aa8.6□□□□□ -1.03
CNKSR3-205ENST00000607772 PRDM2Q13029 1718 aa8.6□□□□□ -1.03
CNKSR3-205ENST00000607772 PMFBP1Q8TBY8 1022 aa8.6□□□□□ -1.03
CNKSR3-205ENST00000607772 CGNQ9P2M7 1197 aaKnown RBP8.6□□□□□ -1.03
CNKSR3-205ENST00000607772 ZBED9Q6R2W3 1325 aa8.6□□□□□ -1.03
CNKSR3-205ENST00000607772 RUFY1Q96T51 708 aa8.59□□□□□ -1.03
CNKSR3-205ENST00000607772 DNAJC2Q99543 621 aaKnown RBP8.59□□□□□ -1.03
CNKSR3-205ENST00000607772 ERCC6Q03468 1493 aa8.59□□□□□ -1.03
CNKSR3-205ENST00000607772 CENPQQ7L2Z9 268 aaPredicted RBP8.59□□□□□ -1.03
CNKSR3-205ENST00000607772 CHMP5Q9NZZ3 219 aa8.59□□□□□ -1.03
CNKSR3-205ENST00000607772 PDCL2Q8N4E4 241 aa8.59□□□□□ -1.03
CNKSR3-205ENST00000607772 L3MBTL2Q969R5 705 aa8.59□□□□□ -1.03
CNKSR3-205ENST00000607772 ERICH4A6NGS2 130 aa8.59□□□□□ -1.03
CNKSR3-205ENST00000607772 LTV1Q96GA3 475 aaPredicted RBP8.59□□□□□ -1.03
CNKSR3-205ENST00000607772 SMC4Q9NTJ3 1288 aa8.59□□□□□ -1.03
CNKSR3-205ENST00000607772 MYH6P13533 1939 aa8.59□□□□□ -1.03
CNKSR3-205ENST00000607772 CACNA1CQ13936 2221 aa8.58□□□□□ -1.04
CNKSR3-205ENST00000607772 CREBRFQ8IUR6 639 aa8.58□□□□□ -1.04
CNKSR3-205ENST00000607772 FHAD1B1AJZ9 1412 aa8.58□□□□□ -1.04
CNKSR3-205ENST00000607772 SLC4A10Q6U841 1118 aa8.58□□□□□ -1.04
CNKSR3-205ENST00000607772 HOMEZQ8IX15 550 aa8.58□□□□□ -1.04
CNKSR3-205ENST00000607772 CRBNQ96SW2 442 aa8.58□□□□□ -1.04
CNKSR3-205ENST00000607772 SSR1P43307 286 aaKnown RBP8.58□□□□□ -1.04
CNKSR3-205ENST00000607772 CHMP3Q9Y3E7 222 aa8.58□□□□□ -1.04
CNKSR3-205ENST00000607772 AXDND1Q5T1B0 1012 aaPredicted RBP8.58□□□□□ -1.04
CNKSR3-205ENST00000607772 ERCC4Q92889 916 aaPredicted RBP8.58□□□□□ -1.04
CNKSR3-205ENST00000607772 FAM107BQ9H098 131 aa8.57□□□□□ -1.04
CNKSR3-205ENST00000607772 NACADO15069 1562 aa8.57□□□□□ -1.04
CNKSR3-205ENST00000607772 BECN2A8MW95 431 aa8.57□□□□□ -1.04
CNKSR3-205ENST00000607772 CCP110O43303 1012 aa8.57□□□□□ -1.04
CNKSR3-205ENST00000607772 NUTM2FA1L443 756 aa8.57□□□□□ -1.04
CNKSR3-205ENST00000607772 CAVIN1Q6NZI2 390 aaKnown RBP8.57□□□□□ -1.04
CNKSR3-205ENST00000607772 TIGD1Q96MW7 591 aa8.57□□□□□ -1.04
CNKSR3-205ENST00000607772 PHLDB1Q86UU1 1377 aa8.57□□□□□ -1.04
CNKSR3-205ENST00000607772 PRDM10Q9NQV6 1147 aa8.57□□□□□ -1.04
CNKSR3-205ENST00000607772 BCL2L13Q9BXK5 485 aa8.56□□□□□ -1.04
CNKSR3-205ENST00000607772 GTF2A1P52655 376 aaPredicted RBP8.56□□□□□ -1.04
CNKSR3-205ENST00000607772 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.56□□□□□ -1.041e-6■□□□□ 11.3
CNKSR3-205ENST00000607772 PANK3Q9H999 370 aa8.56□□□□□ -1.04
CNKSR3-205ENST00000607772 EXOC6Q8TAG9 804 aa8.56□□□□□ -1.04
CNKSR3-205ENST00000607772 GOLGA6L7A0A1B0GV03 622 aa8.56□□□□□ -1.04
CNKSR3-205ENST00000607772 NUCB2P80303 420 aa8.56□□□□□ -1.04
CNKSR3-205ENST00000607772 HDGFL2Q7Z4V5 671 aaPredicted RBP8.56□□□□□ -1.04
CNKSR3-205ENST00000607772 TSR1Q2NL82 804 aaKnown RBP8.56□□□□□ -1.04
CNKSR3-205ENST00000607772 E9PSI1 815 aa8.56□□□□□ -1.04
CNKSR3-205ENST00000607772 CHMP4AQ9BY43 222 aa8.56□□□□□ -1.04
CNKSR3-205ENST00000607772 DDX11Q96FC9 970 aa8.56□□□□□ -1.04
CNKSR3-205ENST00000607772 PAXIP1Q6ZW49 1069 aaPredicted RBP8.56□□□□□ -1.04
CNKSR3-205ENST00000607772 VPS8Q8N3P4 1428 aa8.56□□□□□ -1.04
CNKSR3-205ENST00000607772 TPM1P09493 284 aa8.56□□□□□ -1.04
CNKSR3-205ENST00000607772 CTR9Q6PD62 1173 aa8.55□□□□□ -1.04
CNKSR3-205ENST00000607772 NUP155O75694 1391 aa8.55□□□□□ -1.04
CNKSR3-205ENST00000607772 ZRSR2Q15696 482 aaKnown RBP8.55□□□□□ -1.04
CNKSR3-205ENST00000607772 EVPLQ92817 2033 aa8.55□□□□□ -1.04
CNKSR3-205ENST00000607772 ZNF526Q8TF50 670 aaPredicted RBP8.55□□□□□ -1.04
CNKSR3-205ENST00000607772 ABCA1O95477 2261 aa8.55□□□□□ -1.04
CNKSR3-205ENST00000607772 DYNC1I1O14576 645 aa8.54□□□□□ -1.04
CNKSR3-205ENST00000607772 CSB-PGBD3P0DP91 1061 aa8.54□□□□□ -1.04
CNKSR3-205ENST00000607772 GPATCH11Q8N954 259 aa8.54□□□□□ -1.04
CNKSR3-205ENST00000607772 CENPJQ9HC77 1338 aaPredicted RBP8.54□□□□□ -1.04
CNKSR3-205ENST00000607772 CCDC88BA6NC98 1476 aa8.54□□□□□ -1.04
CNKSR3-205ENST00000607772 IPO7O95373 1038 aaKnown RBP8.54□□□□□ -1.04
CNKSR3-205ENST00000607772 CEP290O15078 2479 aa8.54□□□□□ -1.04
CNKSR3-205ENST00000607772 WWC1Q8IX03 1113 aa8.54□□□□□ -1.04
CNKSR3-205ENST00000607772 ANKRD45Q5TZF3 282 aa8.53□□□□□ -1.04
CNKSR3-205ENST00000607772 GPATCH3Q96I76 525 aa8.53□□□□□ -1.04
CNKSR3-205ENST00000607772 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.53□□□□□ -1.04
CNKSR3-205ENST00000607772 PLCD4Q9BRC7 762 aa8.53□□□□□ -1.04
CNKSR3-205ENST00000607772 GTPBP4Q9BZE4 634 aaKnown RBP8.53□□□□□ -1.04
CNKSR3-205ENST00000607772 BCL11BQ9C0K0 894 aaPredicted RBP8.53□□□□□ -1.04
CNKSR3-205ENST00000607772 CLGNO14967 610 aa8.53□□□□□ -1.04
CNKSR3-205ENST00000607772 LETM1O95202 739 aaPredicted RBP8.53□□□□□ -1.04
CNKSR3-205ENST00000607772 HNRNPMP52272 730 aaKnown RBP eCLIP8.53□□□□□ -1.046e-7■■■□□ 16.5
CNKSR3-205ENST00000607772 CCDC112Q8NEF3 446 aa8.53□□□□□ -1.04
CNKSR3-205ENST00000607772 RNF20Q5VTR2 975 aa8.52□□□□□ -1.05
CNKSR3-205ENST00000607772 ELL2O00472 640 aaPredicted RBP8.52□□□□□ -1.05
CNKSR3-205ENST00000607772 SASS6Q6UVJ0 657 aa8.52□□□□□ -1.05
CNKSR3-205ENST00000607772 ZSCAN30Q86W11 494 aa8.52□□□□□ -1.05
CNKSR3-205ENST00000607772 GRPEL1Q9HAV7 217 aa8.52□□□□□ -1.05
CNKSR3-205ENST00000607772 BAZ1AQ9NRL2 1556 aaPredicted RBP8.52□□□□□ -1.05
CNKSR3-205ENST00000607772 TRAK2O60296 914 aa8.52□□□□□ -1.05
CNKSR3-205ENST00000607772 EIF3JO75822 258 aaKnown RBP8.52□□□□□ -1.05
CNKSR3-205ENST00000607772 MROH2BQ7Z745 1585 aa8.52□□□□□ -1.05
CNKSR3-205ENST00000607772 GORABQ5T7V8 394 aa8.52□□□□□ -1.05
CNKSR3-205ENST00000607772 FRAT2O75474 233 aaPredicted RBP8.52□□□□□ -1.05
CNKSR3-205ENST00000607772 IPO4Q8TEX9 1081 aaKnown RBP8.52□□□□□ -1.05
CNKSR3-205ENST00000607772 ST20-MTHFSA0A0A6YYL1 179 aa8.51□□□□□ -1.05
CNKSR3-205ENST00000607772 DHX8Q14562 1220 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms