RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 PXYLP1Q8TE99 480 aa10.46□□□□□ -0.74
KARSP3-201ENST00000571212 ZNF516Q92618 1163 aa10.46□□□□□ -0.74
KARSP3-201ENST00000571212 GPIHBP1Q8IV16 184 aa10.44□□□□□ -0.74
KARSP3-201ENST00000571212 METTL3Q86U44 580 aaKnown RBP10.43□□□□□ -0.74
KARSP3-201ENST00000571212 NLRP7Q8WX94 980 aa10.43□□□□□ -0.74
KARSP3-201ENST00000571212 OATP04181 439 aa10.43□□□□□ -0.74
KARSP3-201ENST00000571212 COPS2P61201 443 aa10.43□□□□□ -0.74
KARSP3-201ENST00000571212 IL21Q9HBE4 155 aa10.42□□□□□ -0.74
KARSP3-201ENST00000571212 SLC4A3P48751 1232 aa10.41□□□□□ -0.74
KARSP3-201ENST00000571212 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.4□□□□□ -0.74
KARSP3-201ENST00000571212 SLC10A3P09131 477 aa10.4□□□□□ -0.74
KARSP3-201ENST00000571212 NKX2-3Q8TAU0 364 aa10.4□□□□□ -0.74
KARSP3-201ENST00000571212 NECTIN2Q92692 538 aa10.39□□□□□ -0.75
KARSP3-201ENST00000571212 PHOX2BQ99453 314 aa10.39□□□□□ -0.75
KARSP3-201ENST00000571212 CFHP08603 1231 aa10.36□□□□□ -0.75
KARSP3-201ENST00000571212 BLOC1S3Q6QNY0 202 aa10.36□□□□□ -0.75
KARSP3-201ENST00000571212 PCDHB3Q9Y5E6 796 aa10.36□□□□□ -0.75
KARSP3-201ENST00000571212 RGS20O76081 388 aa10.35□□□□□ -0.75
KARSP3-201ENST00000571212 PPP1R18Q6NYC8 613 aa10.34□□□□□ -0.75
KARSP3-201ENST00000571212 TULP1O00294 542 aaPredicted RBP10.33□□□□□ -0.76
KARSP3-201ENST00000571212 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.33□□□□□ -0.76
KARSP3-201ENST00000571212 PRR14Q9BWN1 585 aa10.33□□□□□ -0.76
KARSP3-201ENST00000571212 ACTN4O43707 911 aaKnown RBP10.32□□□□□ -0.76
KARSP3-201ENST00000571212 ZPR1O75312 459 aa10.32□□□□□ -0.76
KARSP3-201ENST00000571212 KMT5BQ4FZB7 885 aa10.32□□□□□ -0.76
KARSP3-201ENST00000571212 DAXXQ9UER7 740 aaPredicted RBP10.32□□□□□ -0.76
KARSP3-201ENST00000571212 DDX11L8A8MPP1 907 aa10.3□□□□□ -0.76
KARSP3-201ENST00000571212 TLL1O43897 1013 aa10.3□□□□□ -0.76
KARSP3-201ENST00000571212 PUS10Q3MIT2 529 aaKnown RBP10.29□□□□□ -0.76
KARSP3-201ENST00000571212 RDH13Q8NBN7 331 aa10.29□□□□□ -0.76
KARSP3-201ENST00000571212 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.28□□□□□ -0.76
KARSP3-201ENST00000571212 IRF6O14896 467 aa10.28□□□□□ -0.76
KARSP3-201ENST00000571212 MAP2K5Q13163 448 aa10.28□□□□□ -0.76
KARSP3-201ENST00000571212 LMOD2Q6P5Q4 547 aa10.27□□□□□ -0.77
KARSP3-201ENST00000571212 IRX2Q9BZI1 471 aaPredicted RBP10.25□□□□□ -0.77
KARSP3-201ENST00000571212 RSPH4AQ5TD94 716 aa10.24□□□□□ -0.77
KARSP3-201ENST00000571212 PRKD2Q9BZL6 878 aa10.24□□□□□ -0.77
KARSP3-201ENST00000571212 SCUBE3Q8IX30 993 aa10.23□□□□□ -0.77
KARSP3-201ENST00000571212 CCDC102AQ96A19 550 aa10.23□□□□□ -0.77
KARSP3-201ENST00000571212 MINK1Q8N4C8 1332 aaPredicted RBP10.23□□□□□ -0.77
KARSP3-201ENST00000571212 FUT2Q10981 343 aa10.23□□□□□ -0.77
KARSP3-201ENST00000571212 PPEF1O14829 653 aaPredicted RBP10.22□□□□□ -0.77
KARSP3-201ENST00000571212 MDM2Q00987 491 aaPredicted RBP10.22□□□□□ -0.77
KARSP3-201ENST00000571212 NR1I2O75469 434 aa10.21□□□□□ -0.78
KARSP3-201ENST00000571212 GCGRP47871 477 aa10.21□□□□□ -0.78
KARSP3-201ENST00000571212 RNF223E7ERA6 249 aa10.2□□□□□ -0.78
KARSP3-201ENST00000571212 S1PR4O95977 384 aa10.2□□□□□ -0.78
KARSP3-201ENST00000571212 SULF1Q8IWU6 871 aa10.2□□□□□ -0.78
KARSP3-201ENST00000571212 GGCXP38435 758 aa10.19□□□□□ -0.78
KARSP3-201ENST00000571212 MORN1Q5T089 497 aa10.17□□□□□ -0.78
KARSP3-201ENST00000571212 ADH1BP00325 375 aa10.17□□□□□ -0.78
KARSP3-201ENST00000571212 ATP6V1AP38606 617 aa10.17□□□□□ -0.78
KARSP3-201ENST00000571212 ZC3H15Q8WU90 426 aaKnown RBP10.17□□□□□ -0.78
KARSP3-201ENST00000571212 TMUB1Q9BVT8 246 aa10.17□□□□□ -0.78
KARSP3-201ENST00000571212 CD46P15529 392 aa10.16□□□□□ -0.78
KARSP3-201ENST00000571212 KRI1Q8N9T8 703 aaKnown RBP10.16□□□□□ -0.78
KARSP3-201ENST00000571212 EMID1Q96A84 441 aaPredicted RBP10.16□□□□□ -0.78
KARSP3-201ENST00000571212 SLC27A5Q9Y2P5 690 aa10.16□□□□□ -0.78
KARSP3-201ENST00000571212 V9GY48 417 aaPredicted RBP10.15□□□□□ -0.78
KARSP3-201ENST00000571212 ZMYND10O75800 440 aa10.14□□□□□ -0.79
KARSP3-201ENST00000571212 SPSB2Q99619 263 aa10.14□□□□□ -0.79
KARSP3-201ENST00000571212 SLC6A16Q9GZN6 736 aa10.14□□□□□ -0.79
KARSP3-201ENST00000571212 BARGINQ6ZT62 677 aa10.13□□□□□ -0.79
KARSP3-201ENST00000571212 REPIN1Q9BWE0 567 aaKnown RBP10.13□□□□□ -0.79
KARSP3-201ENST00000571212 THAP11Q96EK4 314 aa10.12□□□□□ -0.79
KARSP3-201ENST00000571212 RB1CC1Q8TDY2 1594 aa10.12□□□□□ -0.79
KARSP3-201ENST00000571212 GFRA3O60609 400 aa10.12□□□□□ -0.79
KARSP3-201ENST00000571212 HLA-CQ95604 372 aa10.12□□□□□ -0.79
KARSP3-201ENST00000571212 PLA2G2CQ5R387 149 aa10.11□□□□□ -0.79
KARSP3-201ENST00000571212 RNF19BQ6ZMZ0 732 aa10.11□□□□□ -0.79
KARSP3-201ENST00000571212 GPCPD1Q9NPB8 672 aa10.11□□□□□ -0.79
KARSP3-201ENST00000571212 SLC19A1P41440 591 aa10.1□□□□□ -0.79
KARSP3-201ENST00000571212 LIAT1Q6ZQX7 453 aa10.1□□□□□ -0.79
KARSP3-201ENST00000571212 ANKLE1Q8NAG6 615 aa10.1□□□□□ -0.79
KARSP3-201ENST00000571212 FAM217BQ9NTX9 383 aaPredicted RBP10.1□□□□□ -0.79
KARSP3-201ENST00000571212 CLCN1P35523 988 aa10.09□□□□□ -0.79
KARSP3-201ENST00000571212 Q6ZNB5 142 aa10.09□□□□□ -0.79
KARSP3-201ENST00000571212 FAM160A2Q8N612 972 aaPredicted RBP10.09□□□□□ -0.79
KARSP3-201ENST00000571212 KDM4AO75164 1064 aa10.08□□□□□ -0.8
KARSP3-201ENST00000571212 FMNL1O95466 1100 aaPredicted RBP10.08□□□□□ -0.8
KARSP3-201ENST00000571212 PRDM9Q9NQV7 894 aa10.08□□□□□ -0.8
KARSP3-201ENST00000571212 BRICD5Q6PL45 260 aa10.07□□□□□ -0.8
KARSP3-201ENST00000571212 GUCA2AQ02747 115 aa10.06□□□□□ -0.8
KARSP3-201ENST00000571212 GRIPAP1Q4V328 841 aa10.05□□□□□ -0.8
KARSP3-201ENST00000571212 SPRYD7Q5W111 196 aa10.05□□□□□ -0.8
KARSP3-201ENST00000571212 PDZRN3Q9UPQ7 1066 aa10.05□□□□□ -0.8
KARSP3-201ENST00000571212 TRIM67Q6ZTA4 783 aa10.04□□□□□ -0.8
KARSP3-201ENST00000571212 LCE2BO14633 110 aa10.03□□□□□ -0.8
KARSP3-201ENST00000571212 SSTR3P32745 418 aaPredicted RBP10.03□□□□□ -0.8
KARSP3-201ENST00000571212 TTLL12Q14166 644 aaPredicted RBP10.03□□□□□ -0.8
KARSP3-201ENST00000571212 FCF1Q9Y324 198 aaKnown RBP10.03□□□□□ -0.8
KARSP3-201ENST00000571212 SALL2Q9Y467 1007 aaPredicted RBP10.03□□□□□ -0.8
KARSP3-201ENST00000571212 NACADO15069 1562 aa10.03□□□□□ -0.8
KARSP3-201ENST00000571212 HOXA2O43364 376 aa10.02□□□□□ -0.8
KARSP3-201ENST00000571212 LAPTM4AQ15012 233 aa10.02□□□□□ -0.81
KARSP3-201ENST00000571212 NRG2O14511 850 aaPredicted RBP10.01□□□□□ -0.81
KARSP3-201ENST00000571212 AMHR2Q16671 573 aa10.01□□□□□ -0.81
KARSP3-201ENST00000571212 ZNF697Q5TEC3 545 aa10.01□□□□□ -0.81
KARSP3-201ENST00000571212 ZNF598Q86UK7 904 aaKnown RBP10.01□□□□□ -0.81
KARSP3-201ENST00000571212 SYMPKQ92797 1274 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms