RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 GOLGA6AQ9NYA3 693 aa11.73□□□□□ -0.53
CDH1-205ENST00000562836 TULP2O00295 520 aa11.72□□□□□ -0.53
CDH1-205ENST00000562836 ZNF853P0CG23 659 aa11.72□□□□□ -0.53
CDH1-205ENST00000562836 BIRC2Q13490 618 aa11.72□□□□□ -0.53
CDH1-205ENST00000562836 TSPAN18Q96SJ8 248 aa11.72□□□□□ -0.53
CDH1-205ENST00000562836 RIPOR2Q9Y4F9 1068 aa11.72□□□□□ -0.53
CDH1-205ENST00000562836 ZC3H12AQ5D1E8 599 aaKnown RBP11.72□□□□□ -0.53
CDH1-205ENST00000562836 PROCA1Q8NCQ7 364 aaPredicted RBP11.72□□□□□ -0.53
CDH1-205ENST00000562836 CCDC97Q96F63 343 aaPredicted RBP11.72□□□□□ -0.53
CDH1-205ENST00000562836 DYNC1I1O14576 645 aa11.71□□□□□ -0.53
CDH1-205ENST00000562836 RBM5P52756 815 aaKnown RBP eCLIP11.71□□□□□ -0.54
CDH1-205ENST00000562836 MYBPC2Q14324 1141 aa11.71□□□□□ -0.54
CDH1-205ENST00000562836 ITFG2Q969R8 447 aa11.71□□□□□ -0.54
CDH1-205ENST00000562836 TSPYL1Q9H0U9 437 aa11.7□□□□□ -0.54
CDH1-205ENST00000562836 BSDC1Q9NW68 430 aaPredicted RBP11.7□□□□□ -0.54
CDH1-205ENST00000562836 MROH2BQ7Z745 1585 aa11.7□□□□□ -0.54
CDH1-205ENST00000562836 SSFA2P28290 1259 aa11.7□□□□□ -0.54
CDH1-205ENST00000562836 SPINK5Q9NQ38 1064 aaPredicted RBP11.7□□□□□ -0.54
CDH1-205ENST00000562836 EIF4G1Q04637 1599 aaKnown RBP11.69□□□□□ -0.54
CDH1-205ENST00000562836 ATP2B3Q16720 1220 aa11.69□□□□□ -0.54
CDH1-205ENST00000562836 TMX1Q9H3N1 280 aa11.69□□□□□ -0.54
CDH1-205ENST00000562836 MYH16Q9H6N6 1097 aa11.69□□□□□ -0.54
CDH1-205ENST00000562836 RBM28Q9NW13 759 aaKnown RBP11.69□□□□□ -0.54
CDH1-205ENST00000562836 KIF16BQ96L93 1317 aa11.69□□□□□ -0.54
CDH1-205ENST00000562836 DDX46Q7L014 1031 aaKnown RBP11.69□□□□□ -0.54
CDH1-205ENST00000562836 RPS6KL1Q9Y6S9 549 aa11.69□□□□□ -0.54
CDH1-205ENST00000562836 CECR2Q9BXF3 1484 aa11.68□□□□□ -0.54
CDH1-205ENST00000562836 C1QTNF12Q5T7M4 302 aa11.68□□□□□ -0.54
CDH1-205ENST00000562836 FAM212AQ96EL1 285 aa11.68□□□□□ -0.54
CDH1-205ENST00000562836 TRERF1Q96PN7 1200 aa11.68□□□□□ -0.54
CDH1-205ENST00000562836 NACADO15069 1562 aa11.68□□□□□ -0.54
CDH1-205ENST00000562836 NPM3O75607 178 aaKnown RBP11.68□□□□□ -0.54
CDH1-205ENST00000562836 DONSONQ9NYP3 566 aa11.68□□□□□ -0.54
CDH1-205ENST00000562836 CCER2I3L3R5 266 aa11.67□□□□□ -0.54
CDH1-205ENST00000562836 GET4Q7L5D6 327 aaPredicted RBP11.67□□□□□ -0.54
CDH1-205ENST00000562836 STK24Q9Y6E0 443 aa11.67□□□□□ -0.54
CDH1-205ENST00000562836 CADPSQ9ULU8 1353 aa11.67□□□□□ -0.54
CDH1-205ENST00000562836 CCDC66A2RUB6 948 aa11.67□□□□□ -0.54
CDH1-205ENST00000562836 FOXD4Q12950 439 aaPredicted RBP11.67□□□□□ -0.54
CDH1-205ENST00000562836 EVI5LQ96CN4 794 aa11.67□□□□□ -0.54
CDH1-205ENST00000562836 KIF3AQ9Y496 699 aa11.67□□□□□ -0.54
CDH1-205ENST00000562836 HDAC1Q13547 482 aaPredicted RBP11.67□□□□□ -0.54
CDH1-205ENST00000562836 APBB1IPQ7Z5R6 666 aaPredicted RBP11.66□□□□□ -0.54
CDH1-205ENST00000562836 NOL10Q9BSC4 688 aaKnown RBP11.66□□□□□ -0.54
CDH1-205ENST00000562836 BAZ1AQ9NRL2 1556 aaPredicted RBP11.66□□□□□ -0.54
CDH1-205ENST00000562836 NME8Q8N427 588 aa11.66□□□□□ -0.54
CDH1-205ENST00000562836 CCDC189A1A4V9 331 aa11.65□□□□□ -0.54
CDH1-205ENST00000562836 SF3A1Q15459 793 aaKnown RBP11.65□□□□□ -0.54
CDH1-205ENST00000562836 TOMM22Q9NS69 142 aa11.65□□□□□ -0.54
CDH1-205ENST00000562836 FEZ2Q9UHY8 353 aaPredicted RBP11.65□□□□□ -0.54
CDH1-205ENST00000562836 WIZO95785 1651 aa11.65□□□□□ -0.54
CDH1-205ENST00000562836 SPDYE4A6NLX3 237 aa11.64□□□□□ -0.55
CDH1-205ENST00000562836 NOP2P46087 812 aaKnown RBP11.64□□□□□ -0.55
CDH1-205ENST00000562836 LRCH2Q5VUJ6 765 aa11.64□□□□□ -0.55
CDH1-205ENST00000562836 CREBRFQ8IUR6 639 aa11.64□□□□□ -0.55
CDH1-205ENST00000562836 KDM4CQ9H3R0 1056 aa11.64□□□□□ -0.55
CDH1-205ENST00000562836 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.64□□□□□ -0.55
CDH1-205ENST00000562836 RSPH14Q9UHP6 348 aa11.64□□□□□ -0.55
CDH1-205ENST00000562836 FSD2A1L4K1 749 aa11.64□□□□□ -0.55
CDH1-205ENST00000562836 PDE4AP27815 886 aa11.63□□□□□ -0.55
CDH1-205ENST00000562836 TNPO1Q92973 898 aaKnown RBP11.63□□□□□ -0.55
CDH1-205ENST00000562836 MFSD4BQ5TF39 518 aa11.63□□□□□ -0.55
CDH1-205ENST00000562836 SUFUQ9UMX1 484 aa11.63□□□□□ -0.55
CDH1-205ENST00000562836 SIN3AQ96ST3 1273 aa11.62□□□□□ -0.55
CDH1-205ENST00000562836 PAIP2Q9BPZ3 127 aaKnown RBP11.62□□□□□ -0.55
CDH1-205ENST00000562836 RHBDL3P58872 404 aa11.62□□□□□ -0.55
CDH1-205ENST00000562836 RBM26Q5T8P6 1007 aaKnown RBP11.62□□□□□ -0.55
CDH1-205ENST00000562836 NOL8Q76FK4 1167 aaKnown RBP11.62□□□□□ -0.55
CDH1-205ENST00000562836 ERBB3P21860 1342 aa11.61□□□□□ -0.55
CDH1-205ENST00000562836 NRDCO43847 1150 aa11.61□□□□□ -0.55
CDH1-205ENST00000562836 PAX7P23759 505 aa11.61□□□□□ -0.55
CDH1-205ENST00000562836 MFAP1P55081 439 aaKnown RBP11.61□□□□□ -0.55
CDH1-205ENST00000562836 CEP162Q5TB80 1403 aa11.61□□□□□ -0.55
CDH1-205ENST00000562836 MICALL1Q8N3F8 863 aa11.6□□□□□ -0.55
CDH1-205ENST00000562836 TNIKQ9UKE5 1360 aa11.6□□□□□ -0.55
CDH1-205ENST00000562836 ICE2Q659A1 982 aa11.6□□□□□ -0.55
CDH1-205ENST00000562836 MSL3Q8N5Y2 521 aaKnown RBP11.6□□□□□ -0.55
CDH1-205ENST00000562836 ACRBPQ8NEB7 543 aa11.6□□□□□ -0.55
CDH1-205ENST00000562836 SDR16C5Q8N3Y7 309 aa11.59□□□□□ -0.55
CDH1-205ENST00000562836 COQ9O75208 318 aa11.59□□□□□ -0.55
CDH1-205ENST00000562836 SMC3Q9UQE7 1217 aa11.59□□□□□ -0.55
CDH1-205ENST00000562836 TPD52L2O43399 206 aaKnown RBP11.58□□□□□ -0.56
CDH1-205ENST00000562836 PAX3P23760 479 aa11.58□□□□□ -0.56
CDH1-205ENST00000562836 MRE11P49959 708 aa11.58□□□□□ -0.56
CDH1-205ENST00000562836 ZNF280DQ6N043 979 aa11.58□□□□□ -0.56
CDH1-205ENST00000562836 KIF1CO43896 1103 aaKnown RBP11.58□□□□□ -0.56
CDH1-205ENST00000562836 GUCY2CP25092 1073 aa11.58□□□□□ -0.56
CDH1-205ENST00000562836 CALCOCO1Q9P1Z2 691 aa11.58□□□□□ -0.56
CDH1-205ENST00000562836 PPP1R12AO14974 1030 aaPredicted RBP11.57□□□□□ -0.56
CDH1-205ENST00000562836 CADPS2Q86UW7 1296 aa11.57□□□□□ -0.56
CDH1-205ENST00000562836 BACH2Q9BYV9 841 aa11.57□□□□□ -0.56
CDH1-205ENST00000562836 GZF1Q9H116 711 aaPredicted RBP11.57□□□□□ -0.56
CDH1-205ENST00000562836 ZBED9Q6R2W3 1325 aa11.57□□□□□ -0.56
CDH1-205ENST00000562836 KLHL33A6NCF5 533 aa11.57□□□□□ -0.56
CDH1-205ENST00000562836 PPP2R5AQ15172 486 aa11.57□□□□□ -0.56
CDH1-205ENST00000562836 GAS2L2Q8NHY3 880 aa11.57□□□□□ -0.56
CDH1-205ENST00000562836 KCNV2Q8TDN2 545 aa11.57□□□□□ -0.56
CDH1-205ENST00000562836 SLC26A8Q96RN1 970 aa11.57□□□□□ -0.56
CDH1-205ENST00000562836 NBPF3Q9H094 633 aa11.57□□□□□ -0.56
CDH1-205ENST00000562836 EEA1Q15075 1411 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms