RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 IQGAP3Q86VI3 1631 aa22.53■■□□□ 1.2
SPG7-205ENST00000561945 E9PCH4 1651 aa22.53■■□□□ 1.2
SPG7-205ENST00000561945 FAM135BQ49AJ0 1406 aa22.52■■□□□ 1.2
SPG7-205ENST00000561945 SENP3Q9H4L4 574 aaPredicted RBP22.52■■□□□ 1.2
SPG7-205ENST00000561945 TMEM94Q12767 1356 aa22.5■■□□□ 1.19
SPG7-205ENST00000561945 CHD2O14647 1828 aaKnown RBP22.5■■□□□ 1.19
SPG7-205ENST00000561945 PLEKHG1Q9ULL1 1385 aa22.49■■□□□ 1.19
SPG7-205ENST00000561945 SLC26A8Q96RN1 970 aa22.47■■□□□ 1.19
SPG7-205ENST00000561945 RIMS2Q9UQ26 1411 aa22.45■■□□□ 1.18
SPG7-205ENST00000561945 ROBO1Q9Y6N7 1651 aa22.44■■□□□ 1.18
SPG7-205ENST00000561945 HDGFP51858 240 aaKnown RBP22.42■■□□□ 1.18
SPG7-205ENST00000561945 DIP2AQ14689 1571 aa22.42■■□□□ 1.18
SPG7-205ENST00000561945 NCOA3Q9Y6Q9 1424 aa22.4■■□□□ 1.18
SPG7-205ENST00000561945 PROSER2Q86WR7 435 aaPredicted RBP22.4■■□□□ 1.18
SPG7-205ENST00000561945 TBX22Q9Y458 520 aa22.39■■□□□ 1.17
SPG7-205ENST00000561945 ADAMTS13Q76LX8 1427 aa22.39■■□□□ 1.17
SPG7-205ENST00000561945 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.38■■□□□ 1.17
SPG7-205ENST00000561945 PIK3R4Q99570 1358 aa22.37■■□□□ 1.17
SPG7-205ENST00000561945 RBM33Q96EV2 1170 aaKnown RBP22.36■■□□□ 1.17
SPG7-205ENST00000561945 PHF23Q9BUL5 403 aaPredicted RBP22.36■■□□□ 1.17
SPG7-205ENST00000561945 NUP155O75694 1391 aa22.36■■□□□ 1.17
SPG7-205ENST00000561945 MSH6P52701 1360 aa22.36■■□□□ 1.17
SPG7-205ENST00000561945 RGS17Q9UGC6 210 aaPredicted RBP22.34■■□□□ 1.17
SPG7-205ENST00000561945 SPHKAPQ2M3C7 1700 aa22.34■■□□□ 1.17
SPG7-205ENST00000561945 PPP1R15AO75807 674 aaPredicted RBP22.32■■□□□ 1.16
SPG7-205ENST00000561945 BCANQ96GW7 911 aa22.31■■□□□ 1.16
SPG7-205ENST00000561945 SLAIN2Q9P270 581 aa22.3■■□□□ 1.16
SPG7-205ENST00000561945 NRXN3Q9Y4C0 1643 aa22.3■■□□□ 1.16
SPG7-205ENST00000561945 TRPM2O94759 1503 aa22.3■■□□□ 1.16
SPG7-205ENST00000561945 PHLPP1O60346 1717 aa22.29■■□□□ 1.16
SPG7-205ENST00000561945 RRBP1Q9P2E9 1410 aaKnown RBP22.29■■□□□ 1.16
SPG7-205ENST00000561945 SETBP1Q9Y6X0 1596 aa22.29■■□□□ 1.16
SPG7-205ENST00000561945 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.28■■□□□ 1.16
SPG7-205ENST00000561945 COL16A1Q07092 1604 aaPredicted RBP22.27■■□□□ 1.16
SPG7-205ENST00000561945 XRN1Q8IZH2 1706 aaKnown RBP22.26■■□□□ 1.15
SPG7-205ENST00000561945 CHGAP10645 457 aaKnown RBP22.25■■□□□ 1.15
SPG7-205ENST00000561945 PTPRUQ92729 1446 aa22.24■■□□□ 1.15
SPG7-205ENST00000561945 AHDC1Q5TGY3 1603 aaPredicted RBP22.23■■□□□ 1.15
SPG7-205ENST00000561945 ITGAEP38570 1179 aa22.22■■□□□ 1.15
SPG7-205ENST00000561945 CLTCL1P53675 1640 aa22.21■■□□□ 1.15
SPG7-205ENST00000561945 NUTM2DQ5VT03 806 aaPredicted RBP22.21■■□□□ 1.15
SPG7-205ENST00000561945 C19orf44Q9H6X5 657 aa22.21■■□□□ 1.15
SPG7-205ENST00000561945 JCADQ9P266 1359 aa22.21■■□□□ 1.15
SPG7-205ENST00000561945 NAIPQ13075 1403 aa22.21■■□□□ 1.15
SPG7-205ENST00000561945 DCCP43146 1447 aa22.2■■□□□ 1.14
SPG7-205ENST00000561945 NEXMIFQ5QGS0 1516 aa22.2■■□□□ 1.14
SPG7-205ENST00000561945 CADPS2Q86UW7 1296 aa22.19■■□□□ 1.14
SPG7-205ENST00000561945 AMOTL2Q9Y2J4 779 aa22.18■■□□□ 1.14
SPG7-205ENST00000561945 PPARGC1BQ86YN6 1023 aaKnown RBP22.17■■□□□ 1.14
SPG7-205ENST00000561945 KIF1BO60333 1816 aa22.17■■□□□ 1.14
SPG7-205ENST00000561945 SHPRHQ149N8 1683 aa22.17■■□□□ 1.14
SPG7-205ENST00000561945 POTEAQ6S8J7 498 aa22.15■■□□□ 1.14
SPG7-205ENST00000561945 HFM1A2PYH4 1435 aa22.13■■□□□ 1.13
SPG7-205ENST00000561945 SETD1AO15047 1707 aaKnown RBP22.12■■□□□ 1.13
SPG7-205ENST00000561945 ATF3P18847 181 aa22.12■■□□□ 1.13
SPG7-205ENST00000561945 METP08581 1390 aa22.12■■□□□ 1.13
SPG7-205ENST00000561945 SPATA31A6Q5VVP1 1343 aa22.11■■□□□ 1.13
SPG7-205ENST00000561945 C14orf37Q86TY3 774 aa22.11■■□□□ 1.13
SPG7-205ENST00000561945 LRP6O75581 1613 aa22.1■■□□□ 1.13
SPG7-205ENST00000561945 NHSL1Q5SYE7 1610 aa22.1■■□□□ 1.13
SPG7-205ENST00000561945 MST1RQ04912 1400 aa22.09■■□□□ 1.13
SPG7-205ENST00000561945 PRAG1Q86YV5 1406 aa22.09■■□□□ 1.13
SPG7-205ENST00000561945 ASXL1Q8IXJ9 1541 aa22.08■■□□□ 1.13
SPG7-205ENST00000561945 BRINP3Q76B58 766 aa22.08■■□□□ 1.13
SPG7-205ENST00000561945 NALCNQ8IZF0 1738 aa22.08■■□□□ 1.12
SPG7-205ENST00000561945 ZNF326Q5BKZ1 582 aaKnown RBP22.07■■□□□ 1.12
SPG7-205ENST00000561945 ADGRL3Q9HAR2 1447 aa22.06■■□□□ 1.12
SPG7-205ENST00000561945 SETD5Q9C0A6 1442 aa22.05■■□□□ 1.12
SPG7-205ENST00000561945 LAMC1P11047 1609 aa22.04■■□□□ 1.12
SPG7-205ENST00000561945 PPLO60437 1756 aa22.04■■□□□ 1.12
SPG7-205ENST00000561945 PTCH1Q13635 1447 aa22.04■■□□□ 1.12
SPG7-205ENST00000561945 RPGRIP1LQ68CZ1 1315 aa22.01■■□□□ 1.11
SPG7-205ENST00000561945 VGFO15240 615 aaPredicted RBP21.99■■□□□ 1.11
SPG7-205ENST00000561945 ZNF772Q68DY9 489 aaPredicted RBP21.96■■□□□ 1.11
SPG7-205ENST00000561945 SLC4A1APQ9BWU0 796 aaKnown RBP21.94■■□□□ 1.1
SPG7-205ENST00000561945 ROBO2Q9HCK4 1378 aa21.94■■□□□ 1.1
SPG7-205ENST00000561945 C1orf167Q5SNV9 1468 aa21.94■■□□□ 1.1
SPG7-205ENST00000561945 IFT172Q9UG01 1749 aa21.94■■□□□ 1.1
SPG7-205ENST00000561945 TRIM52Q96A61 297 aa21.93■■□□□ 1.1
SPG7-205ENST00000561945 LRRC59Q96AG4 307 aaKnown RBP21.93■■□□□ 1.1
SPG7-205ENST00000561945 CDK12Q9NYV4 1490 aaPredicted RBP21.91■■□□□ 1.1
SPG7-205ENST00000561945 PNPLA6Q8IY17 1366 aa21.9■■□□□ 1.1
SPG7-205ENST00000561945 MEX3CQ5U5Q3 659 aaKnown RBP21.9■■□□□ 1.1
SPG7-205ENST00000561945 SPATA31E1Q6ZUB1 1445 aa21.89■■□□□ 1.1
SPG7-205ENST00000561945 CDC42BPGQ6DT37 1551 aa21.88■■□□□ 1.09
SPG7-205ENST00000561945 CCDC144AA2RUR9 1427 aa21.86■■□□□ 1.09
SPG7-205ENST00000561945 TECPR2O15040 1411 aa21.86■■□□□ 1.09
SPG7-205ENST00000561945 SOS2Q07890 1332 aaPredicted RBP21.85■■□□□ 1.09
SPG7-205ENST00000561945 COL22A1Q8NFW1 1626 aaPredicted RBP21.85■■□□□ 1.09
SPG7-205ENST00000561945 KNDC1Q76NI1 1749 aa21.85■■□□□ 1.09
SPG7-205ENST00000561945 DDX17Q92841 729 aaKnown RBP21.84■■□□□ 1.09
SPG7-205ENST00000561945 ANKRD30BQ9BXX2 1392 aa21.83■■□□□ 1.08
SPG7-205ENST00000561945 NUTM2BA6NNL0 878 aaPredicted RBP21.82■■□□□ 1.08
SPG7-205ENST00000561945 NUTM2EB1AL46 878 aaPredicted RBP21.82■■□□□ 1.08
SPG7-205ENST00000561945 RXRBP28702 533 aa21.82■■□□□ 1.08
SPG7-205ENST00000561945 NUTM2AQ8IVF1 878 aaPredicted RBP21.82■■□□□ 1.08
SPG7-205ENST00000561945 AFF2P51816 1311 aa21.81■■□□□ 1.08
SPG7-205ENST00000561945 ADGRF5Q8IZF2 1346 aa21.81■■□□□ 1.08
SPG7-205ENST00000561945 FOXD1Q16676 465 aa21.81■■□□□ 1.08
SPG7-205ENST00000561945 MPHOSPH9Q99550 1183 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms