RNA–Protein interactions for RNA: ENST00000556356.1

LRP1-211, Transcript of LDL receptor related protein 1, humanhuman

TSL 2

Gene LRP1, Length 5,114 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-211ENST00000556356 CHMP3Q9Y3E7 222 aa19.35■□□□□ 0.69
LRP1-211ENST00000556356 NAIPQ13075 1403 aa19.35■□□□□ 0.69
LRP1-211ENST00000556356 GTF2E1P29083 439 aaPredicted RBP19.35■□□□□ 0.69
LRP1-211ENST00000556356 APBB1O00213 710 aa19.34■□□□□ 0.69
LRP1-211ENST00000556356 ABTB2Q8N961 1025 aa19.34■□□□□ 0.69
LRP1-211ENST00000556356 B4GALNT3Q6L9W6 998 aa19.34■□□□□ 0.69
LRP1-211ENST00000556356 ATP10BO94823 1461 aa19.33■□□□□ 0.69
LRP1-211ENST00000556356 NCLP19338 710 aaKnown RBP19.33■□□□□ 0.69
LRP1-211ENST00000556356 RWDD1Q9H446 243 aaPredicted RBP19.33■□□□□ 0.69
LRP1-211ENST00000556356 NLRP2Q9NX02 1062 aa19.33■□□□□ 0.68
LRP1-211ENST00000556356 CFAP44Q96MT7 982 aa19.33■□□□□ 0.68
LRP1-211ENST00000556356 PMFBP1Q8TBY8 1022 aa19.32■□□□□ 0.68
LRP1-211ENST00000556356 HMMRO75330 724 aa19.32■□□□□ 0.68
LRP1-211ENST00000556356 CDK19Q9BWU1 502 aa19.31■□□□□ 0.68
LRP1-211ENST00000556356 SYTL4Q96C24 671 aaPredicted RBP19.3■□□□□ 0.68
LRP1-211ENST00000556356 THOC2Q8NI27 1593 aaKnown RBP19.29■□□□□ 0.68
LRP1-211ENST00000556356 WDR7Q9Y4E6 1490 aa19.29■□□□□ 0.68
LRP1-211ENST00000556356 UGGT2Q9NYU1 1516 aa19.29■□□□□ 0.68
LRP1-211ENST00000556356 ZNF692Q9BU19 519 aaPredicted RBP19.29■□□□□ 0.68
LRP1-211ENST00000556356 PLCH2O75038 1416 aa19.29■□□□□ 0.68
LRP1-211ENST00000556356 GORABQ5T7V8 394 aa19.29■□□□□ 0.68
LRP1-211ENST00000556356 NGEFQ8N5V2 710 aa19.29■□□□□ 0.68
LRP1-211ENST00000556356 RTEL1-TNFRSF6BF6WH68 1400 aa19.29■□□□□ 0.68
LRP1-211ENST00000556356 E9PSI1 815 aa19.28■□□□□ 0.68
LRP1-211ENST00000556356 GOLGA6L22H0YM25 854 aa19.28■□□□□ 0.68
LRP1-211ENST00000556356 DHX29Q7Z478 1369 aaKnown RBP19.28■□□□□ 0.68
LRP1-211ENST00000556356 ELL2O00472 640 aaPredicted RBP19.27■□□□□ 0.68
LRP1-211ENST00000556356 CLUAP1Q96AJ1 413 aa19.27■□□□□ 0.68
LRP1-211ENST00000556356 APAF1O14727 1248 aa19.27■□□□□ 0.68
LRP1-211ENST00000556356 MCCP23508 829 aa19.27■□□□□ 0.68
LRP1-211ENST00000556356 RIPK4P57078 832 aa19.26■□□□□ 0.67
LRP1-211ENST00000556356 GPATCH8Q9UKJ3 1502 aaKnown RBP19.26■□□□□ 0.67
LRP1-211ENST00000556356 NCOA1Q15788 1441 aa19.26■□□□□ 0.67
LRP1-211ENST00000556356 CEBPAP49715 358 aaPredicted RBP19.26■□□□□ 0.67
LRP1-211ENST00000556356 KIAA0556O60303 1618 aa19.25■□□□□ 0.67
LRP1-211ENST00000556356 FBXO31Q5XUX0 539 aaPredicted RBP19.25■□□□□ 0.67
LRP1-211ENST00000556356 NAP1L2Q9ULW6 460 aaPredicted RBP19.25■□□□□ 0.67
LRP1-211ENST00000556356 NUP153P49790 1475 aaKnown RBP19.25■□□□□ 0.67
LRP1-211ENST00000556356 RUNDC1Q96C34 613 aa19.25■□□□□ 0.67
LRP1-211ENST00000556356 MSH5O43196 834 aa19.24■□□□□ 0.67
LRP1-211ENST00000556356 CABP1Q9NZU7 370 aa19.24■□□□□ 0.67
LRP1-211ENST00000556356 NBPF8Q3BBV2 869 aa19.24■□□□□ 0.67
LRP1-211ENST00000556356 ERICH6BQ5W0A0 696 aa19.23■□□□□ 0.67
LRP1-211ENST00000556356 GPATCH3Q96I76 525 aa19.23■□□□□ 0.67
LRP1-211ENST00000556356 CTTNBP2Q8WZ74 1663 aa19.23■□□□□ 0.67
LRP1-211ENST00000556356 NUP160Q12769 1436 aa19.23■□□□□ 0.67
LRP1-211ENST00000556356 G3V3G9 751 aa19.23■□□□□ 0.67
LRP1-211ENST00000556356 HMOX1P09601 288 aa19.23■□□□□ 0.67
LRP1-211ENST00000556356 DCAF8Q5TAQ9 597 aa19.23■□□□□ 0.67
LRP1-211ENST00000556356 CNTLNQ9NXG0 1405 aa19.23■□□□□ 0.67
LRP1-211ENST00000556356 EIF2S2P20042 333 aaKnown RBP19.22■□□□□ 0.67
LRP1-211ENST00000556356 KIAA1211Q6ZU35 1233 aa19.22■□□□□ 0.67
LRP1-211ENST00000556356 SLC12A5Q9H2X9 1139 aa19.21■□□□□ 0.67
LRP1-211ENST00000556356 NEXNQ0ZGT2 675 aa19.21■□□□□ 0.67
LRP1-211ENST00000556356 ATAD2Q6PL18 1390 aa19.2■□□□□ 0.66
LRP1-211ENST00000556356 IDI1Q13907 227 aa19.2■□□□□ 0.66
LRP1-211ENST00000556356 MTHFSP49914 203 aa19.2■□□□□ 0.66
LRP1-211ENST00000556356 TAOK2Q9UL54 1235 aa19.19■□□□□ 0.66
LRP1-211ENST00000556356 SMG6Q86US8 1419 aaKnown RBP19.19■□□□□ 0.66
LRP1-211ENST00000556356 WASHC2AQ641Q2 1341 aa19.18■□□□□ 0.66
LRP1-211ENST00000556356 HSP90AB1P08238 724 aaKnown RBP19.17■□□□□ 0.66
LRP1-211ENST00000556356 GNAI1P63096 354 aa19.17■□□□□ 0.66
LRP1-211ENST00000556356 PIP4K2BP78356 416 aa19.17■□□□□ 0.66
LRP1-211ENST00000556356 DMRT2Q9Y5R5 561 aa19.17■□□□□ 0.66
LRP1-211ENST00000556356 ZNF518AQ6AHZ1 1483 aa19.17■□□□□ 0.66
LRP1-211ENST00000556356 ZKSCAN2Q63HK3 967 aa19.17■□□□□ 0.66
LRP1-211ENST00000556356 STRN4Q9NRL3 753 aa19.17■□□□□ 0.66
LRP1-211ENST00000556356 ZRSR1Q15695 479 aaKnown RBP19.16■□□□□ 0.66
LRP1-211ENST00000556356 USP35Q9P2H5 1018 aa19.16■□□□□ 0.66
LRP1-211ENST00000556356 TSPYL4Q9UJ04 414 aa19.16■□□□□ 0.66
LRP1-211ENST00000556356 DDX58O95786 925 aaKnown RBP19.16■□□□□ 0.66
LRP1-211ENST00000556356 ABCC2Q92887 1545 aa19.16■□□□□ 0.66
LRP1-211ENST00000556356 NUTM2BA6NNL0 878 aaPredicted RBP19.15■□□□□ 0.66
LRP1-211ENST00000556356 NUTM2EB1AL46 878 aaPredicted RBP19.15■□□□□ 0.66
LRP1-211ENST00000556356 NBR1Q14596 966 aa19.15■□□□□ 0.66
LRP1-211ENST00000556356 NUTM2AQ8IVF1 878 aaPredicted RBP19.15■□□□□ 0.66
LRP1-211ENST00000556356 ISY1Q9ULR0 285 aaKnown RBP19.15■□□□□ 0.66
LRP1-211ENST00000556356 PLEKHO1Q53GL0 409 aaPredicted RBP19.15■□□□□ 0.66
LRP1-211ENST00000556356 BCL2L13Q9BXK5 485 aa19.15■□□□□ 0.66
LRP1-211ENST00000556356 TNRQ92752 1358 aa19.14■□□□□ 0.66
LRP1-211ENST00000556356 KDM5BQ9UGL1 1544 aa19.14■□□□□ 0.66
LRP1-211ENST00000556356 GAS2L2Q8NHY3 880 aa19.14■□□□□ 0.66
LRP1-211ENST00000556356 CCDC61Q9Y6R9 512 aa19.14■□□□□ 0.65
LRP1-211ENST00000556356 NUDT16Q96DE0 195 aaKnown RBP19.14■□□□□ 0.65
LRP1-211ENST00000556356 WDR97A6NE52 1622 aa19.13■□□□□ 0.65
LRP1-211ENST00000556356 FRAT2O75474 233 aaPredicted RBP19.13■□□□□ 0.65
LRP1-211ENST00000556356 PBRM1Q86U86 1689 aa19.13■□□□□ 0.65
LRP1-211ENST00000556356 ZBED9Q6R2W3 1325 aa19.13■□□□□ 0.65
LRP1-211ENST00000556356 FAM135AQ9P2D6 1515 aa19.13■□□□□ 0.65
LRP1-211ENST00000556356 A2MP01023 1474 aa19.12■□□□□ 0.65
LRP1-211ENST00000556356 TATP17735 454 aaPredicted RBP19.12■□□□□ 0.65
LRP1-211ENST00000556356 PHF23Q9BUL5 403 aaPredicted RBP19.12■□□□□ 0.65
LRP1-211ENST00000556356 ITSN2Q9NZM3 1697 aa19.12■□□□□ 0.65
LRP1-211ENST00000556356 ANP32EQ9BTT0 268 aa19.12■□□□□ 0.65
LRP1-211ENST00000556356 PRDM11Q9NQV5 511 aa19.12■□□□□ 0.65
LRP1-211ENST00000556356 AMOTL2Q9Y2J4 779 aa19.12■□□□□ 0.65
LRP1-211ENST00000556356 PPP2R1AP30153 589 aa19.11■□□□□ 0.65
LRP1-211ENST00000556356 NECTIN2Q92692 538 aa19.11■□□□□ 0.65
LRP1-211ENST00000556356 API5Q9BZZ5 524 aaKnown RBP19.11■□□□□ 0.65
LRP1-211ENST00000556356 BRD4O60885 1362 aaPredicted RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms