RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 ZPR1O75312 459 aa9.14□□□□□ -0.95
ATXN3-227ENST00000554491 RBM26Q5T8P6 1007 aaKnown RBP9.14□□□□□ -0.95
ATXN3-227ENST00000554491 BLOC1S3Q6QNY0 202 aa9.14□□□□□ -0.95
ATXN3-227ENST00000554491 PCDHB3Q9Y5E6 796 aa9.14□□□□□ -0.95
ATXN3-227ENST00000554491 TESPA1A2RU30 521 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-227ENST00000554491 GFRA3O60609 400 aa9.11□□□□□ -0.95
ATXN3-227ENST00000554491 SLC10A3P09131 477 aa9.11□□□□□ -0.95
ATXN3-227ENST00000554491 PRR14Q9BWN1 585 aa9.11□□□□□ -0.95
ATXN3-227ENST00000554491 LCE2BO14633 110 aa9.1□□□□□ -0.95
ATXN3-227ENST00000554491 TLL1O43897 1013 aa9.1□□□□□ -0.95
ATXN3-227ENST00000554491 CFHP08603 1231 aa9.1□□□□□ -0.95
ATXN3-227ENST00000554491 FECHP22830 423 aa9.1□□□□□ -0.95
ATXN3-227ENST00000554491 PXYLP1Q8TE99 480 aa9.1□□□□□ -0.95
ATXN3-227ENST00000554491 V9GY48 417 aaPredicted RBP9.1□□□□□ -0.95
ATXN3-227ENST00000554491 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.08□□□□□ -0.96
ATXN3-227ENST00000554491 HIC1Q14526 733 aa9.08□□□□□ -0.96
ATXN3-227ENST00000554491 GPR37O15354 613 aa9.07□□□□□ -0.96
ATXN3-227ENST00000554491 ACTN4O43707 911 aaKnown RBP9.07□□□□□ -0.96
ATXN3-227ENST00000554491 OATP04181 439 aa9.07□□□□□ -0.96
ATXN3-227ENST00000554491 GGCXP38435 758 aa9.07□□□□□ -0.96
ATXN3-227ENST00000554491 LAPTM4AQ15012 233 aa9.07□□□□□ -0.96
ATXN3-227ENST00000554491 METTL3Q86U44 580 aaKnown RBP9.07□□□□□ -0.96
ATXN3-227ENST00000554491 RNF223E7ERA6 249 aa9.06□□□□□ -0.96
ATXN3-227ENST00000554491 KMT5BQ4FZB7 885 aa9.06□□□□□ -0.96
ATXN3-227ENST00000554491 TMUB1Q9BVT8 246 aa9.06□□□□□ -0.96
ATXN3-227ENST00000554491 EMID1Q96A84 441 aaPredicted RBP9.05□□□□□ -0.96
ATXN3-227ENST00000554491 GNPATO15228 680 aa9.04□□□□□ -0.96
ATXN3-227ENST00000554491 HAP1P54257 671 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-227ENST00000554491 NLRP7Q8WX94 980 aa9.04□□□□□ -0.96
ATXN3-227ENST00000554491 KDM2AQ9Y2K7 1162 aa9.04□□□□□ -0.96
ATXN3-227ENST00000554491 NRG2O14511 850 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-227ENST00000554491 SMYD5Q6GMV2 418 aa9.03□□□□□ -0.96
ATXN3-227ENST00000554491 PPEF1O14829 653 aaPredicted RBP9.02□□□□□ -0.97
ATXN3-227ENST00000554491 S1PR4O95977 384 aa9.02□□□□□ -0.97
ATXN3-227ENST00000554491 PDZRN3Q9UPQ7 1066 aa9.02□□□□□ -0.97
ATXN3-227ENST00000554491 PUS10Q3MIT2 529 aaKnown RBP9.01□□□□□ -0.97
ATXN3-227ENST00000554491 TRAF7Q6Q0C0 670 aa9.01□□□□□ -0.97
ATXN3-227ENST00000554491 PHOX2BQ99453 314 aa9□□□□□ -0.97
ATXN3-227ENST00000554491 NR1I2O75469 434 aa8.99□□□□□ -0.97
ATXN3-227ENST00000554491 SLC19A1P41440 591 aa8.99□□□□□ -0.97
ATXN3-227ENST00000554491 SCUBE3Q8IX30 993 aa8.99□□□□□ -0.97
ATXN3-227ENST00000554491 ADH1BP00325 375 aa8.98□□□□□ -0.97
ATXN3-227ENST00000554491 TRIM67Q6ZTA4 783 aa8.98□□□□□ -0.97
ATXN3-227ENST00000554491 LIAT1Q6ZQX7 453 aa8.97□□□□□ -0.97
ATXN3-227ENST00000554491 ANKLE1Q8NAG6 615 aa8.97□□□□□ -0.97
ATXN3-227ENST00000554491 DAXXQ9UER7 740 aaPredicted RBP8.97□□□□□ -0.97
ATXN3-227ENST00000554491 DDX11L8A8MPP1 907 aa8.96□□□□□ -0.98
ATXN3-227ENST00000554491 RSPH4AQ5TD94 716 aa8.96□□□□□ -0.98
ATXN3-227ENST00000554491 GPIHBP1Q8IV16 184 aa8.96□□□□□ -0.98
ATXN3-227ENST00000554491 RDH13Q8NBN7 331 aa8.96□□□□□ -0.98
ATXN3-227ENST00000554491 PLA2G2CQ5R387 149 aa8.95□□□□□ -0.98
ATXN3-227ENST00000554491 SPRYD7Q5W111 196 aa8.95□□□□□ -0.98
ATXN3-227ENST00000554491 SLC6A16Q9GZN6 736 aa8.95□□□□□ -0.98
ATXN3-227ENST00000554491 FUT2Q10981 343 aa8.94□□□□□ -0.98
ATXN3-227ENST00000554491 SPSB2Q99619 263 aa8.93□□□□□ -0.98
ATXN3-227ENST00000554491 MORN1Q5T089 497 aa8.92□□□□□ -0.98
ATXN3-227ENST00000554491 ZNF598Q86UK7 904 aaKnown RBP8.92□□□□□ -0.98
ATXN3-227ENST00000554491 ABCC9O60706 1549 aa8.9□□□□□ -0.98
ATXN3-227ENST00000554491 GCGRP47871 477 aa8.9□□□□□ -0.98
ATXN3-227ENST00000554491 ZNF697Q5TEC3 545 aa8.9□□□□□ -0.98
ATXN3-227ENST00000554491 THAP11Q96EK4 314 aa8.9□□□□□ -0.98
ATXN3-227ENST00000554491 ATP6V1AP38606 617 aa8.89□□□□□ -0.99
ATXN3-227ENST00000554491 SLC27A5Q9Y2P5 690 aa8.89□□□□□ -0.99
ATXN3-227ENST00000554491 TNFRSF10AO00220 468 aa8.88□□□□□ -0.99
ATXN3-227ENST00000554491 SULF1Q8IWU6 871 aa8.88□□□□□ -0.99
ATXN3-227ENST00000554491 FAM160A2Q8N612 972 aaPredicted RBP8.87□□□□□ -0.99
ATXN3-227ENST00000554491 GDF9O60383 454 aa8.86□□□□□ -0.99
ATXN3-227ENST00000554491 PRR20EP86478 221 aa8.86□□□□□ -0.99
ATXN3-227ENST00000554491 PRR20CP86479 221 aa8.86□□□□□ -0.99
ATXN3-227ENST00000554491 PRR20DP86480 221 aa8.86□□□□□ -0.99
ATXN3-227ENST00000554491 PRR20BP86481 221 aa8.86□□□□□ -0.99
ATXN3-227ENST00000554491 PRR20AP86496 221 aa8.86□□□□□ -0.99
ATXN3-227ENST00000554491 PRDM9Q9NQV7 894 aa8.86□□□□□ -0.99
ATXN3-227ENST00000554491 MAP2K5Q13163 448 aa8.85□□□□□ -0.99
ATXN3-227ENST00000554491 FCF1Q9Y324 198 aaKnown RBP8.85□□□□□ -0.99
ATXN3-227ENST00000554491 FMNL1O95466 1100 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-227ENST00000554491 PKDCCQ504Y2 493 aa8.84□□□□□ -0.99
ATXN3-227ENST00000554491 BRICD5Q6PL45 260 aa8.84□□□□□ -0.99
ATXN3-227ENST00000554491 VSIG10Q8N0Z9 540 aa8.84□□□□□ -0.99
ATXN3-227ENST00000554491 IRF6O14896 467 aa8.83□□□□□ -1
ATXN3-227ENST00000554491 MYT1Q01538 1121 aa8.83□□□□□ -1
ATXN3-227ENST00000554491 ZNF787Q6DD87 383 aa8.83□□□□□ -1
ATXN3-227ENST00000554491 RNF19BQ6ZMZ0 732 aa8.83□□□□□ -1
ATXN3-227ENST00000554491 PKD2L1Q9P0L9 805 aa8.83□□□□□ -1
ATXN3-227ENST00000554491 CD46P15529 392 aa8.82□□□□□ -1
ATXN3-227ENST00000554491 FOXC1Q12948 553 aa8.82□□□□□ -1
ATXN3-227ENST00000554491 FAM187AA6NFU0 413 aa8.81□□□□□ -1
ATXN3-227ENST00000554491 DGAT1O75907 488 aa8.81□□□□□ -1
ATXN3-227ENST00000554491 MDM2Q00987 491 aaPredicted RBP8.81□□□□□ -1
ATXN3-227ENST00000554491 SALL2Q9Y467 1007 aaPredicted RBP8.81□□□□□ -1
ATXN3-227ENST00000554491 POTECB2RU33 542 aa8.79□□□□□ -1
ATXN3-227ENST00000554491 HLA-CQ95604 372 aa8.79□□□□□ -1
ATXN3-227ENST00000554491 TULP1O00294 542 aaPredicted RBP8.78□□□□□ -1
ATXN3-227ENST00000554491 RPIAP49247 311 aa8.78□□□□□ -1
ATXN3-227ENST00000554491 CCDC102AQ96A19 550 aa8.78□□□□□ -1
ATXN3-227ENST00000554491 MINK1Q8N4C8 1332 aaPredicted RBP8.78□□□□□ -1
ATXN3-227ENST00000554491 ST8SIA5O15466 376 aa8.77□□□□□ -1.01
ATXN3-227ENST00000554491 KDM4AO75164 1064 aa8.77□□□□□ -1.01
ATXN3-227ENST00000554491 GRIPAP1Q4V328 841 aa8.77□□□□□ -1.01
ATXN3-227ENST00000554491 MSS51Q4VC12 460 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms