RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 GFRA3O60609 400 aa6.95□□□□□ -1.3
SLIRP-202ENST00000553981 ZPR1O75312 459 aa6.95□□□□□ -1.3
SLIRP-202ENST00000553981 LAPTM4AQ15012 233 aa6.95□□□□□ -1.3
SLIRP-202ENST00000553981 FAM161AQ3B820 660 aa6.95□□□□□ -1.3
SLIRP-202ENST00000553981 RBM46Q8TBY0 533 aaKnown RBP6.95□□□□□ -1.3
SLIRP-202ENST00000553981 V9GY48 417 aaPredicted RBP6.95□□□□□ -1.3
SLIRP-202ENST00000553981 PRR14Q9BWN1 585 aa6.94□□□□□ -1.3
SLIRP-202ENST00000553981 TMEM134Q9H6X4 195 aa6.94□□□□□ -1.3
SLIRP-202ENST00000553981 PCDHB3Q9Y5E6 796 aa6.94□□□□□ -1.3
SLIRP-202ENST00000553981 RCCD1A6NED2 376 aa6.93□□□□□ -1.3
SLIRP-202ENST00000553981 LCE2BO14633 110 aa6.93□□□□□ -1.3
SLIRP-202ENST00000553981 FCHSD2O94868 740 aa6.92□□□□□ -1.3
SLIRP-202ENST00000553981 BLOC1S3Q6QNY0 202 aa6.92□□□□□ -1.3
SLIRP-202ENST00000553981 GGCXP38435 758 aa6.91□□□□□ -1.3
SLIRP-202ENST00000553981 TMUB1Q9BVT8 246 aa6.91□□□□□ -1.3
SLIRP-202ENST00000553981 NRG2O14511 850 aaPredicted RBP6.9□□□□□ -1.3
SLIRP-202ENST00000553981 TLL1O43897 1013 aa6.89□□□□□ -1.31
SLIRP-202ENST00000553981 CFHP08603 1231 aa6.89□□□□□ -1.31
SLIRP-202ENST00000553981 SLC10A3P09131 477 aa6.89□□□□□ -1.31
SLIRP-202ENST00000553981 KMT5BQ4FZB7 885 aa6.89□□□□□ -1.31
SLIRP-202ENST00000553981 TRAF7Q6Q0C0 670 aa6.89□□□□□ -1.31
SLIRP-202ENST00000553981 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.88□□□□□ -1.31
SLIRP-202ENST00000553981 RNF223E7ERA6 249 aa6.88□□□□□ -1.31
SLIRP-202ENST00000553981 ACTN4O43707 911 aaKnown RBP6.88□□□□□ -1.31
SLIRP-202ENST00000553981 PXYLP1Q8TE99 480 aa6.88□□□□□ -1.31
SLIRP-202ENST00000553981 TESPA1A2RU30 521 aaPredicted RBP6.87□□□□□ -1.31
SLIRP-202ENST00000553981 PLCB2Q00722 1185 aa6.87□□□□□ -1.31
SLIRP-202ENST00000553981 HIC1Q14526 733 aa6.87□□□□□ -1.31
SLIRP-202ENST00000553981 RBM26Q5T8P6 1007 aaKnown RBP6.87□□□□□ -1.31
SLIRP-202ENST00000553981 OATP04181 439 aa6.86□□□□□ -1.31
SLIRP-202ENST00000553981 EMID1Q96A84 441 aaPredicted RBP6.86□□□□□ -1.31
SLIRP-202ENST00000553981 PDZRN3Q9UPQ7 1066 aa6.86□□□□□ -1.31
SLIRP-202ENST00000553981 METTL3Q86U44 580 aaKnown RBP6.85□□□□□ -1.31
SLIRP-202ENST00000553981 PPEF1O14829 653 aaPredicted RBP6.84□□□□□ -1.31
SLIRP-202ENST00000553981 S1PR4O95977 384 aa6.84□□□□□ -1.31
SLIRP-202ENST00000553981 FECHP22830 423 aa6.84□□□□□ -1.31
SLIRP-202ENST00000553981 SLC19A1P41440 591 aa6.84□□□□□ -1.31
SLIRP-202ENST00000553981 MYO15BQ96JP2 1530 aa6.84□□□□□ -1.31
SLIRP-202ENST00000553981 GNPATO15228 680 aa6.83□□□□□ -1.32
SLIRP-202ENST00000553981 GPR37O15354 613 aa6.83□□□□□ -1.32
SLIRP-202ENST00000553981 SMYD5Q6GMV2 418 aa6.83□□□□□ -1.32
SLIRP-202ENST00000553981 ANKLE1Q8NAG6 615 aa6.83□□□□□ -1.32
SLIRP-202ENST00000553981 NR1I2O75469 434 aa6.82□□□□□ -1.32
SLIRP-202ENST00000553981 ADH1BP00325 375 aa6.82□□□□□ -1.32
SLIRP-202ENST00000553981 TRIM67Q6ZTA4 783 aa6.82□□□□□ -1.32
SLIRP-202ENST00000553981 CC2D2AQ9P2K1 1620 aa6.82□□□□□ -1.32
SLIRP-202ENST00000553981 PUS10Q3MIT2 529 aaKnown RBP6.81□□□□□ -1.32
SLIRP-202ENST00000553981 SPRYD7Q5W111 196 aa6.81□□□□□ -1.32
SLIRP-202ENST00000553981 SCUBE3Q8IX30 993 aa6.81□□□□□ -1.32
SLIRP-202ENST00000553981 RSPH4AQ5TD94 716 aa6.8□□□□□ -1.32
SLIRP-202ENST00000553981 LIAT1Q6ZQX7 453 aa6.8□□□□□ -1.32
SLIRP-202ENST00000553981 SLC6A16Q9GZN6 736 aa6.8□□□□□ -1.32
SLIRP-202ENST00000553981 CECR2Q9BXF3 1484 aa6.79□□□□□ -1.32
SLIRP-202ENST00000553981 ZNF598Q86UK7 904 aaKnown RBP6.79□□□□□ -1.32
SLIRP-202ENST00000553981 DAXXQ9UER7 740 aaPredicted RBP6.79□□□□□ -1.32
SLIRP-202ENST00000553981 ZCCHC6Q5VYS8 1495 aaKnown RBP6.79□□□□□ -1.32
SLIRP-202ENST00000553981 PLA2G2CQ5R387 149 aa6.78□□□□□ -1.32
SLIRP-202ENST00000553981 NLRP7Q8WX94 980 aa6.78□□□□□ -1.32
SLIRP-202ENST00000553981 DDX11L8A8MPP1 907 aa6.77□□□□□ -1.33
SLIRP-202ENST00000553981 ZNF697Q5TEC3 545 aa6.77□□□□□ -1.33
SLIRP-202ENST00000553981 RDH13Q8NBN7 331 aa6.77□□□□□ -1.33
SLIRP-202ENST00000553981 PHOX2BQ99453 314 aa6.77□□□□□ -1.33
SLIRP-202ENST00000553981 SPSB2Q99619 263 aa6.77□□□□□ -1.33
SLIRP-202ENST00000553981 HAP1P54257 671 aaPredicted RBP6.76□□□□□ -1.33
SLIRP-202ENST00000553981 PRR20EP86478 221 aa6.76□□□□□ -1.33
SLIRP-202ENST00000553981 PRR20CP86479 221 aa6.76□□□□□ -1.33
SLIRP-202ENST00000553981 PRR20DP86480 221 aa6.76□□□□□ -1.33
SLIRP-202ENST00000553981 PRR20BP86481 221 aa6.76□□□□□ -1.33
SLIRP-202ENST00000553981 PRR20AP86496 221 aa6.76□□□□□ -1.33
SLIRP-202ENST00000553981 MORN1Q5T089 497 aa6.76□□□□□ -1.33
SLIRP-202ENST00000553981 EIF4G1Q04637 1599 aaKnown RBP6.76□□□□□ -1.33
SLIRP-202ENST00000553981 SCRIBQ14160 1630 aa6.76□□□□□ -1.33
SLIRP-202ENST00000553981 GDF9O60383 454 aa6.75□□□□□ -1.33
SLIRP-202ENST00000553981 FUT2Q10981 343 aa6.75□□□□□ -1.33
SLIRP-202ENST00000553981 ZNF787Q6DD87 383 aa6.75□□□□□ -1.33
SLIRP-202ENST00000553981 GPIHBP1Q8IV16 184 aa6.75□□□□□ -1.33
SLIRP-202ENST00000553981 TNFRSF10AO00220 468 aa6.74□□□□□ -1.33
SLIRP-202ENST00000553981 ATP6V1AP38606 617 aa6.74□□□□□ -1.33
SLIRP-202ENST00000553981 PKDCCQ504Y2 493 aa6.74□□□□□ -1.33
SLIRP-202ENST00000553981 THAP11Q96EK4 314 aa6.74□□□□□ -1.33
SLIRP-202ENST00000553981 KDM2AQ9Y2K7 1162 aa6.74□□□□□ -1.33
SLIRP-202ENST00000553981 DGAT1O75907 488 aa6.73□□□□□ -1.33
SLIRP-202ENST00000553981 GCGRP47871 477 aa6.73□□□□□ -1.33
SLIRP-202ENST00000553981 MYT1Q01538 1121 aa6.73□□□□□ -1.33
SLIRP-202ENST00000553981 SULF1Q8IWU6 871 aa6.73□□□□□ -1.33
SLIRP-202ENST00000553981 SLC27A5Q9Y2P5 690 aa6.73□□□□□ -1.33
SLIRP-202ENST00000553981 DCAF1Q9Y4B6 1507 aa6.72□□□□□ -1.33
SLIRP-202ENST00000553981 FAM160A2Q8N612 972 aaPredicted RBP6.72□□□□□ -1.33
SLIRP-202ENST00000553981 FAM187AA6NFU0 413 aa6.71□□□□□ -1.34
SLIRP-202ENST00000553981 FMNL1O95466 1100 aaPredicted RBP6.71□□□□□ -1.34
SLIRP-202ENST00000553981 FCF1Q9Y324 198 aaKnown RBP6.71□□□□□ -1.34
SLIRP-202ENST00000553981 PKD2L1Q9P0L9 805 aa6.7□□□□□ -1.34
SLIRP-202ENST00000553981 SALL2Q9Y467 1007 aaPredicted RBP6.7□□□□□ -1.34
SLIRP-202ENST00000553981 SHROOM4Q9ULL8 1493 aa6.69□□□□□ -1.34
SLIRP-202ENST00000553981 RPIAP49247 311 aa6.69□□□□□ -1.34
SLIRP-202ENST00000553981 BRICD5Q6PL45 260 aa6.69□□□□□ -1.34
SLIRP-202ENST00000553981 PRDM9Q9NQV7 894 aa6.69□□□□□ -1.34
SLIRP-202ENST00000553981 FOXC1Q12948 553 aa6.68□□□□□ -1.34
SLIRP-202ENST00000553981 RNF19BQ6ZMZ0 732 aa6.68□□□□□ -1.34
SLIRP-202ENST00000553981 ZNF775Q96BV0 537 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms