RNA–Protein interactions for RNA: ENST00000553211.1

LINC02461-201, Transcript of long intergenic non-protein coding RNA 2461, humanhuman

TSL 3 BASIC

Gene LINC02461, Length 836 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02461-201ENST00000553211 NECTIN2Q92692 538 aa10.42□□□□□ -0.74
LINC02461-201ENST00000553211 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.41□□□□□ -0.74
LINC02461-201ENST00000553211 MTRQ99707 1265 aa10.41□□□□□ -0.74
LINC02461-201ENST00000553211 TULP1O00294 542 aaPredicted RBP10.4□□□□□ -0.74
LINC02461-201ENST00000553211 METTL3Q86U44 580 aaKnown RBP10.4□□□□□ -0.74
LINC02461-201ENST00000553211 IL21Q9HBE4 155 aa10.4□□□□□ -0.74
LINC02461-201ENST00000553211 ZNF516Q92618 1163 aa10.39□□□□□ -0.75
LINC02461-201ENST00000553211 SLC10A3P09131 477 aa10.36□□□□□ -0.75
LINC02461-201ENST00000553211 COPS2P61201 443 aa10.36□□□□□ -0.75
LINC02461-201ENST00000553211 NLRP7Q8WX94 980 aa10.36□□□□□ -0.75
LINC02461-201ENST00000553211 RGS20O76081 388 aa10.34□□□□□ -0.75
LINC02461-201ENST00000553211 PCDHB3Q9Y5E6 796 aa10.34□□□□□ -0.75
LINC02461-201ENST00000553211 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.33□□□□□ -0.76
LINC02461-201ENST00000553211 NKX2-3Q8TAU0 364 aa10.33□□□□□ -0.76
LINC02461-201ENST00000553211 PHOX2BQ99453 314 aa10.33□□□□□ -0.76
LINC02461-201ENST00000553211 PRR14Q9BWN1 585 aa10.33□□□□□ -0.76
LINC02461-201ENST00000553211 CFHP08603 1231 aa10.32□□□□□ -0.76
LINC02461-201ENST00000553211 KMT5BQ4FZB7 885 aa10.32□□□□□ -0.76
LINC02461-201ENST00000553211 BLOC1S3Q6QNY0 202 aa10.31□□□□□ -0.76
LINC02461-201ENST00000553211 DAXXQ9UER7 740 aaPredicted RBP10.31□□□□□ -0.76
LINC02461-201ENST00000553211 ACTN4O43707 911 aaKnown RBP10.3□□□□□ -0.76
LINC02461-201ENST00000553211 ZPR1O75312 459 aa10.29□□□□□ -0.76
LINC02461-201ENST00000553211 MAP2K5Q13163 448 aa10.29□□□□□ -0.76
LINC02461-201ENST00000553211 DDX11L8A8MPP1 907 aa10.28□□□□□ -0.76
LINC02461-201ENST00000553211 IRF6O14896 467 aa10.27□□□□□ -0.77
LINC02461-201ENST00000553211 RSPH4AQ5TD94 716 aa10.27□□□□□ -0.77
LINC02461-201ENST00000553211 PPP1R18Q6NYC8 613 aa10.27□□□□□ -0.77
LINC02461-201ENST00000553211 LMOD2Q6P5Q4 547 aa10.27□□□□□ -0.77
LINC02461-201ENST00000553211 RDH13Q8NBN7 331 aa10.27□□□□□ -0.77
LINC02461-201ENST00000553211 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.25□□□□□ -0.77
LINC02461-201ENST00000553211 MINK1Q8N4C8 1332 aaPredicted RBP10.25□□□□□ -0.77
LINC02461-201ENST00000553211 PUS10Q3MIT2 529 aaKnown RBP10.23□□□□□ -0.77
LINC02461-201ENST00000553211 TLL1O43897 1013 aa10.22□□□□□ -0.77
LINC02461-201ENST00000553211 SULF1Q8IWU6 871 aa10.21□□□□□ -0.77
LINC02461-201ENST00000553211 CCDC102AQ96A19 550 aa10.21□□□□□ -0.77
LINC02461-201ENST00000553211 NR1I2O75469 434 aa10.2□□□□□ -0.78
LINC02461-201ENST00000553211 GCGRP47871 477 aa10.2□□□□□ -0.78
LINC02461-201ENST00000553211 GGCXP38435 758 aa10.19□□□□□ -0.78
LINC02461-201ENST00000553211 MDM2Q00987 491 aaPredicted RBP10.19□□□□□ -0.78
LINC02461-201ENST00000553211 FUT2Q10981 343 aa10.19□□□□□ -0.78
LINC02461-201ENST00000553211 SCUBE3Q8IX30 993 aa10.19□□□□□ -0.78
LINC02461-201ENST00000553211 IRX2Q9BZI1 471 aaPredicted RBP10.19□□□□□ -0.78
LINC02461-201ENST00000553211 PRKD2Q9BZL6 878 aa10.19□□□□□ -0.78
LINC02461-201ENST00000553211 KRI1Q8N9T8 703 aaKnown RBP10.18□□□□□ -0.78
LINC02461-201ENST00000553211 ZC3H15Q8WU90 426 aaKnown RBP10.17□□□□□ -0.78
LINC02461-201ENST00000553211 TMUB1Q9BVT8 246 aa10.16□□□□□ -0.78
LINC02461-201ENST00000553211 ADH1BP00325 375 aa10.15□□□□□ -0.78
LINC02461-201ENST00000553211 ATP6V1AP38606 617 aa10.15□□□□□ -0.78
LINC02461-201ENST00000553211 MORN1Q5T089 497 aa10.15□□□□□ -0.78
LINC02461-201ENST00000553211 BARGINQ6ZT62 677 aa10.15□□□□□ -0.78
LINC02461-201ENST00000553211 RNF223E7ERA6 249 aa10.14□□□□□ -0.79
LINC02461-201ENST00000553211 PPEF1O14829 653 aaPredicted RBP10.14□□□□□ -0.79
LINC02461-201ENST00000553211 ZMYND10O75800 440 aa10.14□□□□□ -0.79
LINC02461-201ENST00000553211 S1PR4O95977 384 aa10.14□□□□□ -0.79
LINC02461-201ENST00000553211 CD46P15529 392 aa10.14□□□□□ -0.79
LINC02461-201ENST00000553211 SPSB2Q99619 263 aa10.12□□□□□ -0.79
LINC02461-201ENST00000553211 SLC27A5Q9Y2P5 690 aa10.12□□□□□ -0.79
LINC02461-201ENST00000553211 SLC6A16Q9GZN6 736 aa10.11□□□□□ -0.79
LINC02461-201ENST00000553211 GPCPD1Q9NPB8 672 aa10.11□□□□□ -0.79
LINC02461-201ENST00000553211 V9GY48 417 aaPredicted RBP10.11□□□□□ -0.79
LINC02461-201ENST00000553211 CLCN1P35523 988 aa10.1□□□□□ -0.79
LINC02461-201ENST00000553211 REPIN1Q9BWE0 567 aaKnown RBP10.09□□□□□ -0.79
LINC02461-201ENST00000553211 FAM217BQ9NTX9 383 aaPredicted RBP10.09□□□□□ -0.79
LINC02461-201ENST00000553211 KDM4AO75164 1064 aa10.08□□□□□ -0.8
LINC02461-201ENST00000553211 GRIPAP1Q4V328 841 aa10.08□□□□□ -0.8
LINC02461-201ENST00000553211 ANKLE1Q8NAG6 615 aa10.08□□□□□ -0.8
LINC02461-201ENST00000553211 THAP11Q96EK4 314 aa10.08□□□□□ -0.8
LINC02461-201ENST00000553211 FMNL1O95466 1100 aaPredicted RBP10.07□□□□□ -0.8
LINC02461-201ENST00000553211 EMID1Q96A84 441 aaPredicted RBP10.07□□□□□ -0.8
LINC02461-201ENST00000553211 GFRA3O60609 400 aa10.06□□□□□ -0.8
LINC02461-201ENST00000553211 SLC19A1P41440 591 aa10.06□□□□□ -0.8
LINC02461-201ENST00000553211 BRICD5Q6PL45 260 aa10.06□□□□□ -0.8
LINC02461-201ENST00000553211 RNF19BQ6ZMZ0 732 aa10.05□□□□□ -0.8
LINC02461-201ENST00000553211 FAM160A2Q8N612 972 aaPredicted RBP10.05□□□□□ -0.8
LINC02461-201ENST00000553211 LIAT1Q6ZQX7 453 aa10.04□□□□□ -0.8
LINC02461-201ENST00000553211 HLA-CQ95604 372 aa10.04□□□□□ -0.8
LINC02461-201ENST00000553211 SALL2Q9Y467 1007 aaPredicted RBP10.04□□□□□ -0.8
LINC02461-201ENST00000553211 SSTR3P32745 418 aaPredicted RBP10.03□□□□□ -0.8
LINC02461-201ENST00000553211 TTLL12Q14166 644 aaPredicted RBP10.02□□□□□ -0.81
LINC02461-201ENST00000553211 PLA2G2CQ5R387 149 aa10.02□□□□□ -0.81
LINC02461-201ENST00000553211 USP46P62068 366 aa10.01□□□□□ -0.81
LINC02461-201ENST00000553211 AMHR2Q16671 573 aa10.01□□□□□ -0.81
LINC02461-201ENST00000553211 SPRYD7Q5W111 196 aa10.01□□□□□ -0.81
LINC02461-201ENST00000553211 Q6ZNB5 142 aa10.01□□□□□ -0.81
LINC02461-201ENST00000553211 PRDM9Q9NQV7 894 aa10.01□□□□□ -0.81
LINC02461-201ENST00000553211 TRIM66O15016 1216 aa10□□□□□ -0.81
LINC02461-201ENST00000553211 HOXA2O43364 376 aa10□□□□□ -0.81
LINC02461-201ENST00000553211 SLC24A1O60721 1099 aa10□□□□□ -0.81
LINC02461-201ENST00000553211 GUCA2AQ02747 115 aa10□□□□□ -0.81
LINC02461-201ENST00000553211 LAPTM4AQ15012 233 aa10□□□□□ -0.81
LINC02461-201ENST00000553211 Q3C1V9 767 aa10□□□□□ -0.81
LINC02461-201ENST00000553211 NUTM1Q86Y26 1132 aa10□□□□□ -0.81
LINC02461-201ENST00000553211 AK7Q96M32 723 aa9.99□□□□□ -0.81
LINC02461-201ENST00000553211 FCF1Q9Y324 198 aaKnown RBP9.99□□□□□ -0.81
LINC02461-201ENST00000553211 GIGYF2Q6Y7W6 1299 aaKnown RBP9.98□□□□□ -0.81
LINC02461-201ENST00000553211 ZNF598Q86UK7 904 aaKnown RBP9.98□□□□□ -0.81
LINC02461-201ENST00000553211 PDZRN3Q9UPQ7 1066 aa9.98□□□□□ -0.81
LINC02461-201ENST00000553211 NRG2O14511 850 aaPredicted RBP9.97□□□□□ -0.81
LINC02461-201ENST00000553211 MSS51Q4VC12 460 aa9.97□□□□□ -0.81
LINC02461-201ENST00000553211 ZNF697Q5TEC3 545 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms