RNA–Protein interactions for RNA: ENST00000550173.1

SLC38A1-208, Transcript of solute carrier family 38 member 1, human

TSL 5

Gene SLC38A1, Length 891 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC38A1-208	ENST00000550173		E9PCH4	1651 aa		30.38	■■■□□ 2.45
SLC38A1-208	ENST00000550173	IQGAP3	Q86VI3	1631 aa		30.37	■■■□□ 2.45
SLC38A1-208	ENST00000550173	CHGA	P10645	457 aa	Known RBP	30.37	■■■□□ 2.45
SLC38A1-208	ENST00000550173	NUP155	O75694	1391 aa		30.37	■■■□□ 2.45
SLC38A1-208	ENST00000550173	HDGF	P51858	240 aa	Known RBP	30.36	■■■□□ 2.45
SLC38A1-208	ENST00000550173	PPP1R15A	O75807	674 aa	Predicted RBP	30.35	■■■□□ 2.45
SLC38A1-208	ENST00000550173	ZFYVE9	O95405	1425 aa		30.35	■■■□□ 2.45
SLC38A1-208	ENST00000550173	RIMS2	Q9UQ26	1411 aa		30.35	■■■□□ 2.45
SLC38A1-208	ENST00000550173	TMEM131L	A2VDJ0	1609 aa		30.35	■■■□□ 2.45
SLC38A1-208	ENST00000550173	TMEM94	Q12767	1356 aa		30.34	■■■□□ 2.45
SLC38A1-208	ENST00000550173	PROSER2	Q86WR7	435 aa	Predicted RBP	30.34	■■■□□ 2.45
SLC38A1-208	ENST00000550173	MED1	Q15648	1581 aa	Predicted RBP	30.33	■■■□□ 2.45
SLC38A1-208	ENST00000550173	PLEKHG1	Q9ULL1	1385 aa		30.31	■■■□□ 2.44
SLC38A1-208	ENST00000550173	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	30.28	■■■□□ 2.44
SLC38A1-208	ENST00000550173	RBM33	Q96EV2	1170 aa	Known RBP	30.28	■■■□□ 2.44
SLC38A1-208	ENST00000550173	NWD1	Q149M9	1564 aa		30.27	■■■□□ 2.44
SLC38A1-208	ENST00000550173	NKTR	P30414	1462 aa	Known RBP	30.25	■■■□□ 2.43
SLC38A1-208	ENST00000550173	NUTM2D	Q5VT03	806 aa	Predicted RBP	30.24	■■■□□ 2.43
SLC38A1-208	ENST00000550173	RRBP1	Q9P2E9	1410 aa	Known RBP	30.22	■■■□□ 2.43
SLC38A1-208	ENST00000550173	TBX22	Q9Y458	520 aa		30.21	■■■□□ 2.43
SLC38A1-208	ENST00000550173	CHD2	O14647	1828 aa	Known RBP	30.21	■■■□□ 2.43
SLC38A1-208	ENST00000550173	FAM135B	Q49AJ0	1406 aa		30.21	■■■□□ 2.43
SLC38A1-208	ENST00000550173	PHF23	Q9BUL5	403 aa	Predicted RBP	30.19	■■■□□ 2.42
SLC38A1-208	ENST00000550173	MSH6	P52701	1360 aa		30.16	■■■□□ 2.42
SLC38A1-208	ENST00000550173	ADAMTS13	Q76LX8	1427 aa		30.14	■■■□□ 2.42
SLC38A1-208	ENST00000550173	SPHKAP	Q2M3C7	1700 aa		30.14	■■■□□ 2.42
SLC38A1-208	ENST00000550173	ROBO1	Q9Y6N7	1651 aa		30.12	■■■□□ 2.41
SLC38A1-208	ENST00000550173	DIP2A	Q14689	1571 aa		30.11	■■■□□ 2.41
SLC38A1-208	ENST00000550173	NAIP	Q13075	1403 aa		30.11	■■■□□ 2.41
SLC38A1-208	ENST00000550173	PIK3R4	Q99570	1358 aa		30.08	■■■□□ 2.41
SLC38A1-208	ENST00000550173	ZNF326	Q5BKZ1	582 aa	Known RBP	30.08	■■■□□ 2.41
SLC38A1-208	ENST00000550173	SLAIN2	Q9P270	581 aa		30.08	■■■□□ 2.41
SLC38A1-208	ENST00000550173	C14orf37	Q86TY3	774 aa		30.06	■■■□□ 2.4
SLC38A1-208	ENST00000550173	NCOA3	Q9Y6Q9	1424 aa		30.05	■■■□□ 2.4
SLC38A1-208	ENST00000550173	TRPM2	O94759	1503 aa		30.04	■■■□□ 2.4
SLC38A1-208	ENST00000550173	TRIM52	Q96A61	297 aa		30.02	■■■□□ 2.4
SLC38A1-208	ENST00000550173	AMOTL2	Q9Y2J4	779 aa		30.02	■■■□□ 2.4
SLC38A1-208	ENST00000550173	CLTCL1	P53675	1640 aa		30	■■■□□ 2.39
SLC38A1-208	ENST00000550173	PTPRU	Q92729	1446 aa		29.99	■■■□□ 2.39
SLC38A1-208	ENST00000550173	HFM1	A2PYH4	1435 aa		29.98	■■■□□ 2.39
SLC38A1-208	ENST00000550173	C19orf44	Q9H6X5	657 aa		29.97	■■■□□ 2.39
SLC38A1-208	ENST00000550173	NRXN3	Q9Y4C0	1643 aa		29.96	■■■□□ 2.39
SLC38A1-208	ENST00000550173	SETBP1	Q9Y6X0	1596 aa		29.96	■■■□□ 2.39
SLC38A1-208	ENST00000550173	CADPS2	Q86UW7	1296 aa		29.95	■■■□□ 2.39
SLC38A1-208	ENST00000550173	PHLPP1	O60346	1717 aa		29.95	■■■□□ 2.38
SLC38A1-208	ENST00000550173	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	29.95	■■■□□ 2.38
SLC38A1-208	ENST00000550173	KIF1B	O60333	1816 aa		29.94	■■■□□ 2.38
SLC38A1-208	ENST00000550173	ATF3	P18847	181 aa		29.94	■■■□□ 2.38
SLC38A1-208	ENST00000550173	SLC4A1AP	Q9BWU0	796 aa	Known RBP	29.92	■■■□□ 2.38
SLC38A1-208	ENST00000550173	NEXMIF	Q5QGS0	1516 aa		29.91	■■■□□ 2.38
SLC38A1-208	ENST00000550173	RGS17	Q9UGC6	210 aa	Predicted RBP	29.91	■■■□□ 2.38
SLC38A1-208	ENST00000550173	MET	P08581	1390 aa		29.89	■■■□□ 2.37
SLC38A1-208	ENST00000550173	XRN1	Q8IZH2	1706 aa	Known RBP	29.88	■■■□□ 2.37
SLC38A1-208	ENST00000550173	JCAD	Q9P266	1359 aa		29.87	■■■□□ 2.37
SLC38A1-208	ENST00000550173	COL16A1	Q07092	1604 aa	Predicted RBP	29.83	■■■□□ 2.37
SLC38A1-208	ENST00000550173	VGF	O15240	615 aa	Predicted RBP	29.82	■■■□□ 2.36
SLC38A1-208	ENST00000550173	DCC	P43146	1447 aa		29.81	■■■□□ 2.36
SLC38A1-208	ENST00000550173	BRINP3	Q76B58	766 aa		29.79	■■■□□ 2.36
SLC38A1-208	ENST00000550173	AHDC1	Q5TGY3	1603 aa	Predicted RBP	29.78	■■■□□ 2.36
SLC38A1-208	ENST00000550173	RPGRIP1L	Q68CZ1	1315 aa		29.77	■■■□□ 2.36
SLC38A1-208	ENST00000550173	FOXD1	Q16676	465 aa		29.77	■■■□□ 2.36
SLC38A1-208	ENST00000550173	POTEA	Q6S8J7	498 aa		29.77	■■■□□ 2.36
SLC38A1-208	ENST00000550173	ADGRL3	Q9HAR2	1447 aa		29.73	■■■□□ 2.35
SLC38A1-208	ENST00000550173	MST1R	Q04912	1400 aa		29.72	■■■□□ 2.35
SLC38A1-208	ENST00000550173	SPATA31A6	Q5VVP1	1343 aa		29.71	■■■□□ 2.35
SLC38A1-208	ENST00000550173	PPL	O60437	1756 aa		29.7	■■■□□ 2.35
SLC38A1-208	ENST00000550173	ASXL1	Q8IXJ9	1541 aa		29.7	■■■□□ 2.34
SLC38A1-208	ENST00000550173	SETD1A	O15047	1707 aa	Known RBP	29.69	■■■□□ 2.34
SLC38A1-208	ENST00000550173	NALCN	Q8IZF0	1738 aa		29.68	■■■□□ 2.34
SLC38A1-208	ENST00000550173	MPHOSPH9	Q99550	1183 aa		29.68	■■■□□ 2.34
SLC38A1-208	ENST00000550173	SHPRH	Q149N8	1683 aa		29.67	■■■□□ 2.34
SLC38A1-208	ENST00000550173	MEX3C	Q5U5Q3	659 aa	Known RBP	29.67	■■■□□ 2.34
SLC38A1-208	ENST00000550173	CCDC144A	A2RUR9	1427 aa		29.67	■■■□□ 2.34
SLC38A1-208	ENST00000550173	LRP6	O75581	1613 aa		29.66	■■■□□ 2.34
SLC38A1-208	ENST00000550173	PTCH1	Q13635	1447 aa		29.65	■■■□□ 2.34
SLC38A1-208	ENST00000550173	ROBO2	Q9HCK4	1378 aa		29.64	■■■□□ 2.34
SLC38A1-208	ENST00000550173	RGL3	Q3MIN7	710 aa		29.63	■■■□□ 2.33
SLC38A1-208	ENST00000550173	NHSL1	Q5SYE7	1610 aa		29.61	■■■□□ 2.33
SLC38A1-208	ENST00000550173	NUTM2B	A6NNL0	878 aa	Predicted RBP	29.6	■■■□□ 2.33
SLC38A1-208	ENST00000550173	NUTM2E	B1AL46	878 aa	Predicted RBP	29.6	■■■□□ 2.33
SLC38A1-208	ENST00000550173	NUTM2A	Q8IVF1	878 aa	Predicted RBP	29.6	■■■□□ 2.33
SLC38A1-208	ENST00000550173	SETD5	Q9C0A6	1442 aa		29.6	■■■□□ 2.33
SLC38A1-208	ENST00000550173	DDX17	Q92841	729 aa	Known RBP	29.59	■■■□□ 2.33
SLC38A1-208	ENST00000550173	ADGRF5	Q8IZF2	1346 aa		29.59	■■■□□ 2.33
SLC38A1-208	ENST00000550173	C1orf167	Q5SNV9	1468 aa		29.58	■■■□□ 2.33
SLC38A1-208	ENST00000550173	PRAG1	Q86YV5	1406 aa		29.58	■■■□□ 2.33
SLC38A1-208	ENST00000550173	LRRC59	Q96AG4	307 aa	Known RBP	29.58	■■■□□ 2.33
SLC38A1-208	ENST00000550173	SPATA31E1	Q6ZUB1	1445 aa		29.57	■■■□□ 2.32
SLC38A1-208	ENST00000550173	ACIN1	Q9UKV3	1341 aa	Known RBP	29.56	■■■□□ 2.32
SLC38A1-208	ENST00000550173	ANKRD30B	Q9BXX2	1392 aa		29.55	■■■□□ 2.32
SLC38A1-208	ENST00000550173	ZNF772	Q68DY9	489 aa	Predicted RBP	29.55	■■■□□ 2.32
SLC38A1-208	ENST00000550173	IFT172	Q9UG01	1749 aa		29.51	■■■□□ 2.32
SLC38A1-208	ENST00000550173	ORAI2	Q96SN7	254 aa		29.51	■■■□□ 2.31
SLC38A1-208	ENST00000550173	STK26	Q9P289	416 aa		29.5	■■■□□ 2.31
SLC38A1-208	ENST00000550173	PNPLA6	Q8IY17	1366 aa		29.48	■■■□□ 2.31
SLC38A1-208	ENST00000550173	LRPPRC	P42704	1394 aa	Known RBP	29.45	■■■□□ 2.31
SLC38A1-208	ENST00000550173	TMEM132E	Q6IEE7	984 aa		29.45	■■■□□ 2.31
SLC38A1-208	ENST00000550173	LAMC1	P11047	1609 aa		29.44	■■■□□ 2.3
SLC38A1-208	ENST00000550173	RAB3GAP2	Q9H2M9	1393 aa		29.43	■■■□□ 2.3
SLC38A1-208	ENST00000550173	WAPL	Q7Z5K2	1190 aa		29.43	■■■□□ 2.3

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms