RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 DIP2AQ14689 1571 aa5.55□□□□□ -1.52
CHD4-209ENST00000542717 ADGBQ8N7X0 1667 aa5.54□□□□□ -1.52
CHD4-209ENST00000542717 A0A0G2JS52 829 aa5.54□□□□□ -1.52
CHD4-209ENST00000542717 MYT1Q01538 1121 aa5.54□□□□□ -1.52
CHD4-209ENST00000542717 FNBP4Q8N3X1 1017 aaPredicted RBP5.54□□□□□ -1.52
CHD4-209ENST00000542717 C19orf44Q9H6X5 657 aa5.54□□□□□ -1.52
CHD4-209ENST00000542717 ATRNO75882 1429 aa5.54□□□□□ -1.52
CHD4-209ENST00000542717 SETD5Q9C0A6 1442 aa5.54□□□□□ -1.52
CHD4-209ENST00000542717 DHX29Q7Z478 1369 aaKnown RBP5.54□□□□□ -1.52
CHD4-209ENST00000542717 PNPLA6Q8IY17 1366 aa5.54□□□□□ -1.52
CHD4-209ENST00000542717 ARHGAP23Q9P227 1491 aa5.53□□□□□ -1.52
CHD4-209ENST00000542717 INO80Q9ULG1 1556 aaPredicted RBP5.53□□□□□ -1.52
CHD4-209ENST00000542717 UBR1Q8IWV7 1749 aa5.53□□□□□ -1.52
CHD4-209ENST00000542717 SLIT1O75093 1534 aa5.53□□□□□ -1.52
CHD4-209ENST00000542717 RTEL1-TNFRSF6BF6WH68 1400 aa5.52□□□□□ -1.53
CHD4-209ENST00000542717 PPP1R15AO75807 674 aaPredicted RBP5.52□□□□□ -1.53
CHD4-209ENST00000542717 DDX17Q92841 729 aaKnown RBP5.52□□□□□ -1.53
CHD4-209ENST00000542717 SPON1Q9HCB6 807 aa5.52□□□□□ -1.53
CHD4-209ENST00000542717 CFDP1Q9UEE9 299 aaPredicted RBP5.52□□□□□ -1.53
CHD4-209ENST00000542717 CFAP65Q6ZU64 1925 aaKnown RBP5.52□□□□□ -1.53
CHD4-209ENST00000542717 TMEM2Q9UHN6 1383 aa5.52□□□□□ -1.53
CHD4-209ENST00000542717 NINLQ9Y2I6 1382 aa5.52□□□□□ -1.53
CHD4-209ENST00000542717 ERVK-7P63135 1459 aa5.51□□□□□ -1.53
CHD4-209ENST00000542717 KRT27Q7Z3Y8 459 aa5.51□□□□□ -1.53
CHD4-209ENST00000542717 SEPT12Q8IYM1 358 aa5.51□□□□□ -1.53
CHD4-209ENST00000542717 PLEKHH2Q8IVE3 1493 aa5.51□□□□□ -1.53
CHD4-209ENST00000542717 UNC13BO14795 1591 aa5.5□□□□□ -1.53
CHD4-209ENST00000542717 MAST1Q9Y2H9 1570 aa5.5□□□□□ -1.53
CHD4-209ENST00000542717 FMN1Q68DA7 1419 aa5.5□□□□□ -1.53
CHD4-209ENST00000542717 CCDC9Q9Y3X0 531 aaKnown RBP5.5□□□□□ -1.53
CHD4-209ENST00000542717 CEP350Q5VT06 3117 aa5.5□□□□□ -1.53
CHD4-209ENST00000542717 CAMTA1Q9Y6Y1 1673 aa5.5□□□□□ -1.53
CHD4-209ENST00000542717 PTCH1Q13635 1447 aa5.49□□□□□ -1.53
CHD4-209ENST00000542717 KIAA1107Q9UPP5 1409 aa5.49□□□□□ -1.53
CHD4-209ENST00000542717 NCOA3Q9Y6Q9 1424 aa5.49□□□□□ -1.53
CHD4-209ENST00000542717 ASXL1Q8IXJ9 1541 aa5.49□□□□□ -1.53
CHD4-209ENST00000542717 CDC42BPAQ5VT25 1732 aa5.49□□□□□ -1.53
CHD4-209ENST00000542717 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.49□□□□□ -1.53
CHD4-209ENST00000542717 KCNQ2O43526 872 aa5.49□□□□□ -1.53
CHD4-209ENST00000542717 PRELPP51888 382 aa5.49□□□□□ -1.53
CHD4-209ENST00000542717 EZH2Q15910 746 aaKnown RBP5.49□□□□□ -1.53
CHD4-209ENST00000542717 TNS4Q8IZW8 715 aa5.49□□□□□ -1.53
CHD4-209ENST00000542717 MROH1Q8NDA8 1641 aa5.48□□□□□ -1.53
CHD4-209ENST00000542717 CAMSAP2Q08AD1 1489 aa5.48□□□□□ -1.53
CHD4-209ENST00000542717 NBPF8Q3BBV2 869 aa5.48□□□□□ -1.53
CHD4-209ENST00000542717 NBPF14Q5TI25 921 aa5.48□□□□□ -1.53
CHD4-209ENST00000542717 CSRNP3Q8WYN3 585 aa5.48□□□□□ -1.53
CHD4-209ENST00000542717 GPATCH8Q9UKJ3 1502 aaKnown RBP5.48□□□□□ -1.53
CHD4-209ENST00000542717 RALGAPBQ86X10 1494 aa5.47□□□□□ -1.53
CHD4-209ENST00000542717 ARHGAP35Q9NRY4 1499 aa5.47□□□□□ -1.53
CHD4-209ENST00000542717 UNC5CLQ8IV45 518 aa5.47□□□□□ -1.53
CHD4-209ENST00000542717 TET3O43151 1660 aa5.47□□□□□ -1.53
CHD4-209ENST00000542717 BRWD3Q6RI45 1802 aa5.46□□□□□ -1.53
CHD4-209ENST00000542717 CCNB3Q8WWL7 1395 aa5.46□□□□□ -1.54
CHD4-209ENST00000542717 HSPA6P17066 643 aa5.46□□□□□ -1.54
CHD4-209ENST00000542717 COL13A1Q5TAT6 717 aaPredicted RBP5.46□□□□□ -1.54
CHD4-209ENST00000542717 EFCAB6Q5THR3 1501 aa5.46□□□□□ -1.54
CHD4-209ENST00000542717 CHD4Q14839 1912 aa5.46□□□□□ -1.54
CHD4-209ENST00000542717 PIK3C2BO00750 1634 aa5.45□□□□□ -1.54
CHD4-209ENST00000542717 FAM83GA6ND36 823 aa5.45□□□□□ -1.54
CHD4-209ENST00000542717 HDGFP51858 240 aaKnown RBP5.45□□□□□ -1.54
CHD4-209ENST00000542717 SPHKAPQ2M3C7 1700 aa5.45□□□□□ -1.54
CHD4-209ENST00000542717 ZNF644Q9H582 1327 aaPredicted RBP5.45□□□□□ -1.54
CHD4-209ENST00000542717 CCDC18Q5T9S5 1454 aa5.45□□□□□ -1.54
CHD4-209ENST00000542717 CHD2O14647 1828 aaKnown RBP5.44□□□□□ -1.54
CHD4-209ENST00000542717 MST1RQ04912 1400 aa5.44□□□□□ -1.54
CHD4-209ENST00000542717 IDI1Q13907 227 aa5.44□□□□□ -1.54
CHD4-209ENST00000542717 FAM182BQ5T319 152 aa5.44□□□□□ -1.54
CHD4-209ENST00000542717 TBX22Q9Y458 520 aa5.44□□□□□ -1.54
CHD4-209ENST00000542717 GLI3P10071 1580 aa5.43□□□□□ -1.54
CHD4-209ENST00000542717 APBA3O96018 575 aa5.43□□□□□ -1.54
CHD4-209ENST00000542717 TSPY4P0CV99 314 aa5.43□□□□□ -1.54
CHD4-209ENST00000542717 TSPY10P0CW01 314 aa5.43□□□□□ -1.54
CHD4-209ENST00000542717 HAP1P54257 671 aaPredicted RBP5.43□□□□□ -1.54
CHD4-209ENST00000542717 GPR162Q16538 588 aa5.43□□□□□ -1.54
CHD4-209ENST00000542717 AMOTL2Q9Y2J4 779 aa5.43□□□□□ -1.54
CHD4-209ENST00000542717 DCCP43146 1447 aa5.42□□□□□ -1.54
CHD4-209ENST00000542717 TRIM37O94972 964 aa5.42□□□□□ -1.54
CHD4-209ENST00000542717 PELP1Q8IZL8 1130 aaKnown RBP5.42□□□□□ -1.54
CHD4-209ENST00000542717 CAMKK2Q96RR4 588 aa5.42□□□□□ -1.54
CHD4-209ENST00000542717 RGPD1P0DJD0 1748 aa5.42□□□□□ -1.54
CHD4-209ENST00000542717 SOS2Q07890 1332 aaPredicted RBP5.42□□□□□ -1.54
CHD4-209ENST00000542717 PLEKHG1Q9ULL1 1385 aa5.42□□□□□ -1.54
CHD4-209ENST00000542717 CEP152O94986 1710 aa5.41□□□□□ -1.54
CHD4-209ENST00000542717 PLEKHG5O94827 1062 aa5.41□□□□□ -1.54
CHD4-209ENST00000542717 UBTFP17480 764 aaKnown RBP5.41□□□□□ -1.54
CHD4-209ENST00000542717 VPS72Q15906 364 aa5.41□□□□□ -1.54
CHD4-209ENST00000542717 FAM98CQ17RN3 349 aaKnown RBP5.41□□□□□ -1.54
CHD4-209ENST00000542717 SYT17Q9BSW7 474 aa5.41□□□□□ -1.54
CHD4-209ENST00000542717 FHDC1Q9C0D6 1143 aaPredicted RBP5.41□□□□□ -1.54
CHD4-209ENST00000542717 LRRIQ1Q96JM4 1722 aa5.4□□□□□ -1.54
CHD4-209ENST00000542717 RPRD2Q5VT52 1461 aaKnown RBP5.4□□□□□ -1.54
CHD4-209ENST00000542717 ONECUT3O60422 494 aaPredicted RBP5.4□□□□□ -1.54
CHD4-209ENST00000542717 ZBTB7AO95365 584 aa5.4□□□□□ -1.54
CHD4-209ENST00000542717 CHGAP10645 457 aaKnown RBP5.4□□□□□ -1.54
CHD4-209ENST00000542717 ORAI2Q96SN7 254 aa5.4□□□□□ -1.54
CHD4-209ENST00000542717 GPBP1L1Q9HC44 474 aaPredicted RBP5.4□□□□□ -1.54
CHD4-209ENST00000542717 ATF5Q9Y2D1 282 aaPredicted RBP5.4□□□□□ -1.54
CHD4-209ENST00000542717 ADGRB2O60241 1585 aa5.4□□□□□ -1.55
CHD4-209ENST00000542717 PARD3Q8TEW0 1356 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms