RNA–Protein interactions for RNA: ENST00000529054.5

MS4A6A-210, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 5 BASIC

Gene MS4A6A, Length 1,160 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-210ENST00000529054 MTRQ99707 1265 aa13.49□□□□□ -0.25
MS4A6A-210ENST00000529054 TULP1O00294 542 aaPredicted RBP13.47□□□□□ -0.25
MS4A6A-210ENST00000529054 OATP04181 439 aa13.47□□□□□ -0.25
MS4A6A-210ENST00000529054 METTL3Q86U44 580 aaKnown RBP13.47□□□□□ -0.25
MS4A6A-210ENST00000529054 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.45□□□□□ -0.26
MS4A6A-210ENST00000529054 SLC4A3P48751 1232 aa13.45□□□□□ -0.26
MS4A6A-210ENST00000529054 ZNF516Q92618 1163 aa13.44□□□□□ -0.26
MS4A6A-210ENST00000529054 NECTIN2Q92692 538 aa13.43□□□□□ -0.26
MS4A6A-210ENST00000529054 NLRP7Q8WX94 980 aa13.42□□□□□ -0.26
MS4A6A-210ENST00000529054 IL21Q9HBE4 155 aa13.42□□□□□ -0.26
MS4A6A-210ENST00000529054 SLC10A3P09131 477 aa13.41□□□□□ -0.26
MS4A6A-210ENST00000529054 COPS2P61201 443 aa13.41□□□□□ -0.26
MS4A6A-210ENST00000529054 PHOX2BQ99453 314 aa13.4□□□□□ -0.26
MS4A6A-210ENST00000529054 RGS20O76081 388 aa13.37□□□□□ -0.27
MS4A6A-210ENST00000529054 CFHP08603 1231 aa13.37□□□□□ -0.27
MS4A6A-210ENST00000529054 NKX2-3Q8TAU0 364 aa13.36□□□□□ -0.27
MS4A6A-210ENST00000529054 PCDHB3Q9Y5E6 796 aa13.35□□□□□ -0.27
MS4A6A-210ENST00000529054 BLOC1S3Q6QNY0 202 aa13.34□□□□□ -0.27
MS4A6A-210ENST00000529054 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.34□□□□□ -0.27
MS4A6A-210ENST00000529054 PRR14Q9BWN1 585 aa13.34□□□□□ -0.27
MS4A6A-210ENST00000529054 ACTN4O43707 911 aaKnown RBP13.31□□□□□ -0.28
MS4A6A-210ENST00000529054 KMT5BQ4FZB7 885 aa13.31□□□□□ -0.28
MS4A6A-210ENST00000529054 DAXXQ9UER7 740 aaPredicted RBP13.31□□□□□ -0.28
MS4A6A-210ENST00000529054 ZPR1O75312 459 aa13.3□□□□□ -0.28
MS4A6A-210ENST00000529054 MAP2K5Q13163 448 aa13.3□□□□□ -0.28
MS4A6A-210ENST00000529054 PPP1R18Q6NYC8 613 aa13.29□□□□□ -0.28
MS4A6A-210ENST00000529054 DDX11L8A8MPP1 907 aa13.27□□□□□ -0.29
MS4A6A-210ENST00000529054 LMOD2Q6P5Q4 547 aa13.27□□□□□ -0.29
MS4A6A-210ENST00000529054 RDH13Q8NBN7 331 aa13.27□□□□□ -0.29
MS4A6A-210ENST00000529054 IRF6O14896 467 aa13.26□□□□□ -0.29
MS4A6A-210ENST00000529054 TLL1O43897 1013 aa13.26□□□□□ -0.29
MS4A6A-210ENST00000529054 RSPH4AQ5TD94 716 aa13.25□□□□□ -0.29
MS4A6A-210ENST00000529054 MINK1Q8N4C8 1332 aaPredicted RBP13.23□□□□□ -0.29
MS4A6A-210ENST00000529054 PUS10Q3MIT2 529 aaKnown RBP13.23□□□□□ -0.29
MS4A6A-210ENST00000529054 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.23□□□□□ -0.29
MS4A6A-210ENST00000529054 CCDC102AQ96A19 550 aa13.22□□□□□ -0.29
MS4A6A-210ENST00000529054 BCANQ96GW7 911 aa13.22□□□□□ -0.29
MS4A6A-210ENST00000529054 MDM2Q00987 491 aaPredicted RBP13.18□□□□□ -0.3
MS4A6A-210ENST00000529054 SULF1Q8IWU6 871 aa13.18□□□□□ -0.3
MS4A6A-210ENST00000529054 IRX2Q9BZI1 471 aaPredicted RBP13.18□□□□□ -0.3
MS4A6A-210ENST00000529054 PRKD2Q9BZL6 878 aa13.18□□□□□ -0.3
MS4A6A-210ENST00000529054 NR1I2O75469 434 aa13.17□□□□□ -0.3
MS4A6A-210ENST00000529054 GCGRP47871 477 aa13.17□□□□□ -0.3
MS4A6A-210ENST00000529054 FUT2Q10981 343 aa13.17□□□□□ -0.3
MS4A6A-210ENST00000529054 SCUBE3Q8IX30 993 aa13.17□□□□□ -0.3
MS4A6A-210ENST00000529054 ABCC9O60706 1549 aa13.17□□□□□ -0.3
MS4A6A-210ENST00000529054 GGCXP38435 758 aa13.14□□□□□ -0.31
MS4A6A-210ENST00000529054 ZC3H15Q8WU90 426 aaKnown RBP13.14□□□□□ -0.31
MS4A6A-210ENST00000529054 RNF223E7ERA6 249 aa13.13□□□□□ -0.31
MS4A6A-210ENST00000529054 S1PR4O95977 384 aa13.13□□□□□ -0.31
MS4A6A-210ENST00000529054 MORN1Q5T089 497 aa13.13□□□□□ -0.31
MS4A6A-210ENST00000529054 PPEF1O14829 653 aaPredicted RBP13.12□□□□□ -0.31
MS4A6A-210ENST00000529054 ADH1BP00325 375 aa13.12□□□□□ -0.31
MS4A6A-210ENST00000529054 TMUB1Q9BVT8 246 aa13.12□□□□□ -0.31
MS4A6A-210ENST00000529054 ZMYND10O75800 440 aa13.11□□□□□ -0.31
MS4A6A-210ENST00000529054 CD46P15529 392 aa13.11□□□□□ -0.31
MS4A6A-210ENST00000529054 ATP6V1AP38606 617 aa13.11□□□□□ -0.31
MS4A6A-210ENST00000529054 BARGINQ6ZT62 677 aa13.11□□□□□ -0.31
MS4A6A-210ENST00000529054 KRI1Q8N9T8 703 aaKnown RBP13.11□□□□□ -0.31
MS4A6A-210ENST00000529054 SLC27A5Q9Y2P5 690 aa13.09□□□□□ -0.31
MS4A6A-210ENST00000529054 V9GY48 417 aaPredicted RBP13.08□□□□□ -0.32
MS4A6A-210ENST00000529054 EMID1Q96A84 441 aaPredicted RBP13.07□□□□□ -0.32
MS4A6A-210ENST00000529054 SPSB2Q99619 263 aa13.07□□□□□ -0.32
MS4A6A-210ENST00000529054 SLC6A16Q9GZN6 736 aa13.07□□□□□ -0.32
MS4A6A-210ENST00000529054 THAP11Q96EK4 314 aa13.06□□□□□ -0.32
MS4A6A-210ENST00000529054 REPIN1Q9BWE0 567 aaKnown RBP13.06□□□□□ -0.32
MS4A6A-210ENST00000529054 GPCPD1Q9NPB8 672 aa13.06□□□□□ -0.32
MS4A6A-210ENST00000529054 CLCN1P35523 988 aa13.04□□□□□ -0.32
MS4A6A-210ENST00000529054 FAM217BQ9NTX9 383 aaPredicted RBP13.04□□□□□ -0.32
MS4A6A-210ENST00000529054 ANKLE1Q8NAG6 615 aa13.03□□□□□ -0.32
MS4A6A-210ENST00000529054 KDM4AO75164 1064 aa13.02□□□□□ -0.33
MS4A6A-210ENST00000529054 FMNL1O95466 1100 aaPredicted RBP13.01□□□□□ -0.33
MS4A6A-210ENST00000529054 SLC19A1P41440 591 aa13.01□□□□□ -0.33
MS4A6A-210ENST00000529054 FAM160A2Q8N612 972 aaPredicted RBP13.01□□□□□ -0.33
MS4A6A-210ENST00000529054 HLA-CQ95604 372 aa13.01□□□□□ -0.33
MS4A6A-210ENST00000529054 PLA2G2CQ5R387 149 aa13□□□□□ -0.33
MS4A6A-210ENST00000529054 BRICD5Q6PL45 260 aa13□□□□□ -0.33
MS4A6A-210ENST00000529054 RNF19BQ6ZMZ0 732 aa13□□□□□ -0.33
MS4A6A-210ENST00000529054 GFRA3O60609 400 aa12.99□□□□□ -0.33
MS4A6A-210ENST00000529054 GRIPAP1Q4V328 841 aa12.99□□□□□ -0.33
MS4A6A-210ENST00000529054 LIAT1Q6ZQX7 453 aa12.99□□□□□ -0.33
MS4A6A-210ENST00000529054 PRDM9Q9NQV7 894 aa12.99□□□□□ -0.33
MS4A6A-210ENST00000529054 SALL2Q9Y467 1007 aaPredicted RBP12.97□□□□□ -0.33
MS4A6A-210ENST00000529054 TTLL12Q14166 644 aaPredicted RBP12.96□□□□□ -0.33
MS4A6A-210ENST00000529054 AMHR2Q16671 573 aa12.96□□□□□ -0.33
MS4A6A-210ENST00000529054 HOXA2O43364 376 aa12.95□□□□□ -0.34
MS4A6A-210ENST00000529054 GUCA2AQ02747 115 aa12.95□□□□□ -0.34
MS4A6A-210ENST00000529054 Q6ZNB5 142 aa12.95□□□□□ -0.34
MS4A6A-210ENST00000529054 SSTR3P32745 418 aaPredicted RBP12.94□□□□□ -0.34
MS4A6A-210ENST00000529054 USP46P62068 366 aa12.94□□□□□ -0.34
MS4A6A-210ENST00000529054 SPRYD7Q5W111 196 aa12.93□□□□□ -0.34
MS4A6A-210ENST00000529054 Q3C1V9 767 aa12.92□□□□□ -0.34
MS4A6A-210ENST00000529054 PDZRN3Q9UPQ7 1066 aa12.92□□□□□ -0.34
MS4A6A-210ENST00000529054 FCF1Q9Y324 198 aaKnown RBP12.92□□□□□ -0.34
MS4A6A-210ENST00000529054 TRIM66O15016 1216 aa12.91□□□□□ -0.34
MS4A6A-210ENST00000529054 LAPTM4AQ15012 233 aa12.91□□□□□ -0.34
MS4A6A-210ENST00000529054 GIGYF2Q6Y7W6 1299 aaKnown RBP12.91□□□□□ -0.34
MS4A6A-210ENST00000529054 TRIM67Q6ZTA4 783 aa12.91□□□□□ -0.34
MS4A6A-210ENST00000529054 NUTM1Q86Y26 1132 aa12.91□□□□□ -0.34
MS4A6A-210ENST00000529054 NRG2O14511 850 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms