RNA–Protein interactions for RNA: ENST00000521683.5

CTNNA1-229, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-229ENST00000521683 TMEM94Q12767 1356 aa13.71□□□□□ -0.21
CTNNA1-229ENST00000521683 FAM135BQ49AJ0 1406 aa13.71□□□□□ -0.22
CTNNA1-229ENST00000521683 TMEM131LA2VDJ0 1609 aa13.71□□□□□ -0.22
CTNNA1-229ENST00000521683 IQGAP3Q86VI3 1631 aa13.71□□□□□ -0.22
CTNNA1-229ENST00000521683 PLEKHG1Q9ULL1 1385 aa13.71□□□□□ -0.22
CTNNA1-229ENST00000521683 SLC26A8Q96RN1 970 aa13.7□□□□□ -0.22
CTNNA1-229ENST00000521683 RIMS2Q9UQ26 1411 aa13.7□□□□□ -0.22
CTNNA1-229ENST00000521683 E9PCH4 1651 aa13.69□□□□□ -0.22
CTNNA1-229ENST00000521683 MYO5BQ9ULV0 1848 aa13.69□□□□□ -0.22
CTNNA1-229ENST00000521683 HDGFP51858 240 aaKnown RBP13.68□□□□□ -0.22
CTNNA1-229ENST00000521683 PROSER2Q86WR7 435 aaPredicted RBP13.67□□□□□ -0.22
CTNNA1-229ENST00000521683 PPP1R15AO75807 674 aaPredicted RBP13.66□□□□□ -0.22
CTNNA1-229ENST00000521683 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.66□□□□□ -0.22
CTNNA1-229ENST00000521683 CHD2O14647 1828 aaKnown RBP13.66□□□□□ -0.22
CTNNA1-229ENST00000521683 DIP2AQ14689 1571 aa13.66□□□□□ -0.22
CTNNA1-229ENST00000521683 BCANQ96GW7 911 aa13.65□□□□□ -0.22
CTNNA1-229ENST00000521683 MSH6P52701 1360 aa13.65□□□□□ -0.22
CTNNA1-229ENST00000521683 ROBO1Q9Y6N7 1651 aa13.65□□□□□ -0.22
CTNNA1-229ENST00000521683 NUP155O75694 1391 aa13.64□□□□□ -0.23
CTNNA1-229ENST00000521683 TBX22Q9Y458 520 aa13.64□□□□□ -0.23
CTNNA1-229ENST00000521683 NCOA3Q9Y6Q9 1424 aa13.64□□□□□ -0.23
CTNNA1-229ENST00000521683 PIK3R4Q99570 1358 aa13.63□□□□□ -0.23
CTNNA1-229ENST00000521683 ADAMTS13Q76LX8 1427 aa13.63□□□□□ -0.23
CTNNA1-229ENST00000521683 CHGAP10645 457 aaKnown RBP13.61□□□□□ -0.23
CTNNA1-229ENST00000521683 RBM33Q96EV2 1170 aaKnown RBP13.6□□□□□ -0.23
CTNNA1-229ENST00000521683 TRPM2O94759 1503 aa13.59□□□□□ -0.23
CTNNA1-229ENST00000521683 SPHKAPQ2M3C7 1700 aa13.59□□□□□ -0.23
CTNNA1-229ENST00000521683 RRBP1Q9P2E9 1410 aaKnown RBP13.58□□□□□ -0.24
CTNNA1-229ENST00000521683 ITGAEP38570 1179 aa13.58□□□□□ -0.24
CTNNA1-229ENST00000521683 SLAIN2Q9P270 581 aa13.58□□□□□ -0.24
CTNNA1-229ENST00000521683 RGS17Q9UGC6 210 aaPredicted RBP13.56□□□□□ -0.24
CTNNA1-229ENST00000521683 SETBP1Q9Y6X0 1596 aa13.56□□□□□ -0.24
CTNNA1-229ENST00000521683 PHLPP1O60346 1717 aa13.56□□□□□ -0.24
CTNNA1-229ENST00000521683 NRXN3Q9Y4C0 1643 aa13.55□□□□□ -0.24
CTNNA1-229ENST00000521683 NUTM2DQ5VT03 806 aaPredicted RBP13.55□□□□□ -0.24
CTNNA1-229ENST00000521683 JCADQ9P266 1359 aa13.55□□□□□ -0.24
CTNNA1-229ENST00000521683 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.54□□□□□ -0.24
CTNNA1-229ENST00000521683 CADPS2Q86UW7 1296 aa13.54□□□□□ -0.24
CTNNA1-229ENST00000521683 C19orf44Q9H6X5 657 aa13.54□□□□□ -0.24
CTNNA1-229ENST00000521683 DCCP43146 1447 aa13.54□□□□□ -0.24
CTNNA1-229ENST00000521683 PTPRUQ92729 1446 aa13.54□□□□□ -0.24
CTNNA1-229ENST00000521683 COL16A1Q07092 1604 aaPredicted RBP13.53□□□□□ -0.24
CTNNA1-229ENST00000521683 XRN1Q8IZH2 1706 aaKnown RBP13.53□□□□□ -0.24
CTNNA1-229ENST00000521683 PPARGC1BQ86YN6 1023 aaKnown RBP13.53□□□□□ -0.24
CTNNA1-229ENST00000521683 NAIPQ13075 1403 aa13.53□□□□□ -0.24
CTNNA1-229ENST00000521683 AHDC1Q5TGY3 1603 aaPredicted RBP13.53□□□□□ -0.24
CTNNA1-229ENST00000521683 C14orf37Q86TY3 774 aa13.52□□□□□ -0.25
CTNNA1-229ENST00000521683 AMOTL2Q9Y2J4 779 aa13.52□□□□□ -0.25
CTNNA1-229ENST00000521683 CLTCL1P53675 1640 aa13.52□□□□□ -0.25
CTNNA1-229ENST00000521683 NEXMIFQ5QGS0 1516 aa13.51□□□□□ -0.25
CTNNA1-229ENST00000521683 HFM1A2PYH4 1435 aa13.5□□□□□ -0.25
CTNNA1-229ENST00000521683 ATF3P18847 181 aa13.5□□□□□ -0.25
CTNNA1-229ENST00000521683 ZNF326Q5BKZ1 582 aaKnown RBP13.49□□□□□ -0.25
CTNNA1-229ENST00000521683 SPATA31A6Q5VVP1 1343 aa13.48□□□□□ -0.25
CTNNA1-229ENST00000521683 POTEAQ6S8J7 498 aa13.48□□□□□ -0.25
CTNNA1-229ENST00000521683 KIF1BO60333 1816 aa13.48□□□□□ -0.25
CTNNA1-229ENST00000521683 METP08581 1390 aa13.47□□□□□ -0.25
CTNNA1-229ENST00000521683 SHPRHQ149N8 1683 aa13.47□□□□□ -0.25
CTNNA1-229ENST00000521683 BRINP3Q76B58 766 aa13.46□□□□□ -0.25
CTNNA1-229ENST00000521683 MST1RQ04912 1400 aa13.46□□□□□ -0.26
CTNNA1-229ENST00000521683 ADGRL3Q9HAR2 1447 aa13.46□□□□□ -0.26
CTNNA1-229ENST00000521683 LRP6O75581 1613 aa13.46□□□□□ -0.26
CTNNA1-229ENST00000521683 ASXL1Q8IXJ9 1541 aa13.45□□□□□ -0.26
CTNNA1-229ENST00000521683 PTCH1Q13635 1447 aa13.44□□□□□ -0.26
CTNNA1-229ENST00000521683 PRAG1Q86YV5 1406 aa13.44□□□□□ -0.26
CTNNA1-229ENST00000521683 NHSL1Q5SYE7 1610 aa13.43□□□□□ -0.26
CTNNA1-229ENST00000521683 RPGRIP1LQ68CZ1 1315 aa13.42□□□□□ -0.26
CTNNA1-229ENST00000521683 SETD1AO15047 1707 aaKnown RBP13.42□□□□□ -0.26
CTNNA1-229ENST00000521683 SETD5Q9C0A6 1442 aa13.42□□□□□ -0.26
CTNNA1-229ENST00000521683 NALCNQ8IZF0 1738 aa13.42□□□□□ -0.26
CTNNA1-229ENST00000521683 VGFO15240 615 aaPredicted RBP13.41□□□□□ -0.26
CTNNA1-229ENST00000521683 TRIM52Q96A61 297 aa13.41□□□□□ -0.26
CTNNA1-229ENST00000521683 ZNF772Q68DY9 489 aaPredicted RBP13.4□□□□□ -0.26
CTNNA1-229ENST00000521683 SLC4A1APQ9BWU0 796 aaKnown RBP13.4□□□□□ -0.26
CTNNA1-229ENST00000521683 MEX3CQ5U5Q3 659 aaKnown RBP13.39□□□□□ -0.27
CTNNA1-229ENST00000521683 PPLO60437 1756 aa13.39□□□□□ -0.27
CTNNA1-229ENST00000521683 LAMC1P11047 1609 aa13.38□□□□□ -0.27
CTNNA1-229ENST00000521683 C1orf167Q5SNV9 1468 aa13.37□□□□□ -0.27
CTNNA1-229ENST00000521683 ROBO2Q9HCK4 1378 aa13.36□□□□□ -0.27
CTNNA1-229ENST00000521683 LRRC59Q96AG4 307 aaKnown RBP13.36□□□□□ -0.27
CTNNA1-229ENST00000521683 PNPLA6Q8IY17 1366 aa13.34□□□□□ -0.27
CTNNA1-229ENST00000521683 CCDC144AA2RUR9 1427 aa13.34□□□□□ -0.27
CTNNA1-229ENST00000521683 CDK12Q9NYV4 1490 aaPredicted RBP13.34□□□□□ -0.27
CTNNA1-229ENST00000521683 SPATA31E1Q6ZUB1 1445 aa13.33□□□□□ -0.28
CTNNA1-229ENST00000521683 CDC42BPGQ6DT37 1551 aa13.32□□□□□ -0.28
CTNNA1-229ENST00000521683 NUTM2BA6NNL0 878 aaPredicted RBP13.32□□□□□ -0.28
CTNNA1-229ENST00000521683 NUTM2EB1AL46 878 aaPredicted RBP13.32□□□□□ -0.28
CTNNA1-229ENST00000521683 NUTM2AQ8IVF1 878 aaPredicted RBP13.32□□□□□ -0.28
CTNNA1-229ENST00000521683 ANKRD30BQ9BXX2 1392 aa13.32□□□□□ -0.28
CTNNA1-229ENST00000521683 TECPR2O15040 1411 aa13.31□□□□□ -0.28
CTNNA1-229ENST00000521683 IFT172Q9UG01 1749 aa13.31□□□□□ -0.28
CTNNA1-229ENST00000521683 POTEDQ86YR6 584 aa13.31□□□□□ -0.28
CTNNA1-229ENST00000521683 DDX17Q92841 729 aaKnown RBP13.31□□□□□ -0.28
CTNNA1-229ENST00000521683 AFF2P51816 1311 aa13.31□□□□□ -0.28
CTNNA1-229ENST00000521683 SOS2Q07890 1332 aaPredicted RBP13.31□□□□□ -0.28
CTNNA1-229ENST00000521683 ACIN1Q9UKV3 1341 aaKnown RBP13.31□□□□□ -0.28
CTNNA1-229ENST00000521683 RXRBP28702 533 aa13.3□□□□□ -0.28
CTNNA1-229ENST00000521683 FOXD1Q16676 465 aa13.3□□□□□ -0.28
CTNNA1-229ENST00000521683 MPHOSPH9Q99550 1183 aa13.29□□□□□ -0.28
CTNNA1-229ENST00000521683 ADGRF5Q8IZF2 1346 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms