RNA–Protein interactions for RNA: ENST00000516543.1

SNORA40.14-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 86 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.14-201ENST00000516543 SLC10A3P09131 477 aa6.88□□□□□ -1.31
SNORA40.14-201ENST00000516543 HAP1P54257 671 aaPredicted RBP6.88□□□□□ -1.31
SNORA40.14-201ENST00000516543 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.88□□□□□ -1.31
SNORA40.14-201ENST00000516543 GPR37O15354 613 aa6.87□□□□□ -1.31
SNORA40.14-201ENST00000516543 ZPR1O75312 459 aa6.87□□□□□ -1.31
SNORA40.14-201ENST00000516543 PCDHB3Q9Y5E6 796 aa6.87□□□□□ -1.31
SNORA40.14-201ENST00000516543 LCE2BO14633 110 aa6.86□□□□□ -1.31
SNORA40.14-201ENST00000516543 TLL1O43897 1013 aa6.86□□□□□ -1.31
SNORA40.14-201ENST00000516543 Q6ZNB5 142 aa6.86□□□□□ -1.31
SNORA40.14-201ENST00000516543 PXYLP1Q8TE99 480 aa6.86□□□□□ -1.31
SNORA40.14-201ENST00000516543 CFHP08603 1231 aa6.85□□□□□ -1.31
SNORA40.14-201ENST00000516543 NLRP7Q8WX94 980 aa6.85□□□□□ -1.31
SNORA40.14-201ENST00000516543 NECTIN2Q92692 538 aa6.85□□□□□ -1.31
SNORA40.14-201ENST00000516543 GFRA3O60609 400 aa6.84□□□□□ -1.31
SNORA40.14-201ENST00000516543 SLC4A3P48751 1232 aa6.84□□□□□ -1.31
SNORA40.14-201ENST00000516543 HIC1Q14526 733 aa6.84□□□□□ -1.31
SNORA40.14-201ENST00000516543 METTL3Q86U44 580 aaKnown RBP6.84□□□□□ -1.31
SNORA40.14-201ENST00000516543 ACTN4O43707 911 aaKnown RBP6.83□□□□□ -1.32
SNORA40.14-201ENST00000516543 EMID1Q96A84 441 aaPredicted RBP6.83□□□□□ -1.32
SNORA40.14-201ENST00000516543 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.82□□□□□ -1.32
SNORA40.14-201ENST00000516543 PPEF1O14829 653 aaPredicted RBP6.82□□□□□ -1.32
SNORA40.14-201ENST00000516543 GNPATO15228 680 aa6.82□□□□□ -1.32
SNORA40.14-201ENST00000516543 RNF223E7ERA6 249 aa6.81□□□□□ -1.32
SNORA40.14-201ENST00000516543 OATP04181 439 aa6.81□□□□□ -1.32
SNORA40.14-201ENST00000516543 PUS10Q3MIT2 529 aaKnown RBP6.81□□□□□ -1.32
SNORA40.14-201ENST00000516543 KMT5BQ4FZB7 885 aa6.81□□□□□ -1.32
SNORA40.14-201ENST00000516543 PHOX2BQ99453 314 aa6.81□□□□□ -1.32
SNORA40.14-201ENST00000516543 PRR14Q9BWN1 585 aa6.81□□□□□ -1.32
SNORA40.14-201ENST00000516543 V9GY48 417 aaPredicted RBP6.81□□□□□ -1.32
SNORA40.14-201ENST00000516543 S1PR4O95977 384 aa6.79□□□□□ -1.32
SNORA40.14-201ENST00000516543 SMYD5Q6GMV2 418 aa6.79□□□□□ -1.32
SNORA40.14-201ENST00000516543 GGCXP38435 758 aa6.78□□□□□ -1.32
SNORA40.14-201ENST00000516543 TMUB1Q9BVT8 246 aa6.78□□□□□ -1.32
SNORA40.14-201ENST00000516543 SCUBE3Q8IX30 993 aa6.77□□□□□ -1.33
SNORA40.14-201ENST00000516543 DDX11L8A8MPP1 907 aa6.76□□□□□ -1.33
SNORA40.14-201ENST00000516543 LAPTM4AQ15012 233 aa6.76□□□□□ -1.33
SNORA40.14-201ENST00000516543 PLA2G2CQ5R387 149 aa6.76□□□□□ -1.33
SNORA40.14-201ENST00000516543 TRAF7Q6Q0C0 670 aa6.76□□□□□ -1.33
SNORA40.14-201ENST00000516543 TRIM67Q6ZTA4 783 aa6.76□□□□□ -1.33
SNORA40.14-201ENST00000516543 GPIHBP1Q8IV16 184 aa6.76□□□□□ -1.33
SNORA40.14-201ENST00000516543 DAXXQ9UER7 740 aaPredicted RBP6.76□□□□□ -1.33
SNORA40.14-201ENST00000516543 NRG2O14511 850 aaPredicted RBP6.75□□□□□ -1.33
SNORA40.14-201ENST00000516543 ADH1BP00325 375 aa6.75□□□□□ -1.33
SNORA40.14-201ENST00000516543 SLC19A1P41440 591 aa6.75□□□□□ -1.33
SNORA40.14-201ENST00000516543 LIAT1Q6ZQX7 453 aa6.75□□□□□ -1.33
SNORA40.14-201ENST00000516543 RDH13Q8NBN7 331 aa6.75□□□□□ -1.33
SNORA40.14-201ENST00000516543 PDZRN3Q9UPQ7 1066 aa6.75□□□□□ -1.33
SNORA40.14-201ENST00000516543 NR1I2O75469 434 aa6.74□□□□□ -1.33
SNORA40.14-201ENST00000516543 FUT2Q10981 343 aa6.74□□□□□ -1.33
SNORA40.14-201ENST00000516543 SPRYD7Q5W111 196 aa6.73□□□□□ -1.33
SNORA40.14-201ENST00000516543 ANKLE1Q8NAG6 615 aa6.73□□□□□ -1.33
SNORA40.14-201ENST00000516543 MORN1Q5T089 497 aa6.72□□□□□ -1.33
SNORA40.14-201ENST00000516543 SPSB2Q99619 263 aa6.72□□□□□ -1.33
SNORA40.14-201ENST00000516543 SLC6A16Q9GZN6 736 aa6.72□□□□□ -1.33
SNORA40.14-201ENST00000516543 GCGRP47871 477 aa6.71□□□□□ -1.34
SNORA40.14-201ENST00000516543 RSPH4AQ5TD94 716 aa6.7□□□□□ -1.34
SNORA40.14-201ENST00000516543 VSIG10Q8N0Z9 540 aa6.7□□□□□ -1.34
SNORA40.14-201ENST00000516543 THAP11Q96EK4 314 aa6.7□□□□□ -1.34
SNORA40.14-201ENST00000516543 SLC27A5Q9Y2P5 690 aa6.7□□□□□ -1.34
SNORA40.14-201ENST00000516543 ATP6V1AP38606 617 aa6.69□□□□□ -1.34
SNORA40.14-201ENST00000516543 ZNF697Q5TEC3 545 aa6.69□□□□□ -1.34
SNORA40.14-201ENST00000516543 ZNF598Q86UK7 904 aaKnown RBP6.69□□□□□ -1.34
SNORA40.14-201ENST00000516543 FAM160A2Q8N612 972 aaPredicted RBP6.69□□□□□ -1.34
SNORA40.14-201ENST00000516543 PRDM9Q9NQV7 894 aa6.69□□□□□ -1.34
SNORA40.14-201ENST00000516543 TNFRSF10AO00220 468 aa6.68□□□□□ -1.34
SNORA40.14-201ENST00000516543 RNF19BQ6ZMZ0 732 aa6.68□□□□□ -1.34
SNORA40.14-201ENST00000516543 GDF9O60383 454 aa6.67□□□□□ -1.34
SNORA40.14-201ENST00000516543 MAP2K5Q13163 448 aa6.67□□□□□ -1.34
SNORA40.14-201ENST00000516543 IRF6O14896 467 aa6.66□□□□□ -1.34
SNORA40.14-201ENST00000516543 CD46P15529 392 aa6.66□□□□□ -1.34
SNORA40.14-201ENST00000516543 MDM2Q00987 491 aaPredicted RBP6.66□□□□□ -1.34
SNORA40.14-201ENST00000516543 SULF1Q8IWU6 871 aa6.66□□□□□ -1.34
SNORA40.14-201ENST00000516543 HLA-CQ95604 372 aa6.66□□□□□ -1.34
SNORA40.14-201ENST00000516543 FCF1Q9Y324 198 aaKnown RBP6.66□□□□□ -1.34
SNORA40.14-201ENST00000516543 BRICD5Q6PL45 260 aa6.65□□□□□ -1.34
SNORA40.14-201ENST00000516543 FMNL1O95466 1100 aaPredicted RBP6.64□□□□□ -1.35
SNORA40.14-201ENST00000516543 PRR20EP86478 221 aa6.64□□□□□ -1.35
SNORA40.14-201ENST00000516543 PRR20CP86479 221 aa6.64□□□□□ -1.35
SNORA40.14-201ENST00000516543 PRR20DP86480 221 aa6.64□□□□□ -1.35
SNORA40.14-201ENST00000516543 PRR20BP86481 221 aa6.64□□□□□ -1.35
SNORA40.14-201ENST00000516543 PRR20AP86496 221 aa6.64□□□□□ -1.35
SNORA40.14-201ENST00000516543 CCDC102AQ96A19 550 aa6.64□□□□□ -1.35
SNORA40.14-201ENST00000516543 MYT1Q01538 1121 aa6.63□□□□□ -1.35
SNORA40.14-201ENST00000516543 FOXC1Q12948 553 aa6.63□□□□□ -1.35
SNORA40.14-201ENST00000516543 PKD2L1Q9P0L9 805 aa6.63□□□□□ -1.35
SNORA40.14-201ENST00000516543 PKDCCQ504Y2 493 aa6.62□□□□□ -1.35
SNORA40.14-201ENST00000516543 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.62□□□□□ -1.35
SNORA40.14-201ENST00000516543 MINK1Q8N4C8 1332 aaPredicted RBP6.61□□□□□ -1.35
SNORA40.14-201ENST00000516543 FAM187AA6NFU0 413 aa6.61□□□□□ -1.35
SNORA40.14-201ENST00000516543 POTECB2RU33 542 aa6.61□□□□□ -1.35
SNORA40.14-201ENST00000516543 GUCA2AQ02747 115 aa6.61□□□□□ -1.35
SNORA40.14-201ENST00000516543 ZNF787Q6DD87 383 aa6.61□□□□□ -1.35
SNORA40.14-201ENST00000516543 REPIN1Q9BWE0 567 aaKnown RBP6.61□□□□□ -1.35
SNORA40.14-201ENST00000516543 SALL2Q9Y467 1007 aaPredicted RBP6.61□□□□□ -1.35
SNORA40.14-201ENST00000516543 KDM4AO75164 1064 aa6.6□□□□□ -1.35
SNORA40.14-201ENST00000516543 TULP1O00294 542 aaPredicted RBP6.59□□□□□ -1.35
SNORA40.14-201ENST00000516543 ST8SIA5O15466 376 aa6.59□□□□□ -1.35
SNORA40.14-201ENST00000516543 DGAT1O75907 488 aa6.59□□□□□ -1.35
SNORA40.14-201ENST00000516543 MSS51Q4VC12 460 aa6.59□□□□□ -1.35
SNORA40.14-201ENST00000516543 RPIAP49247 311 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms